Published in J Mol Biol on May 06, 2006
Folding free-energy landscape of villin headpiece subdomain from molecular dynamics simulations. Proc Natl Acad Sci U S A (2007) 1.99
Two-stage folding of HP-35 from ab initio simulations. J Mol Biol (2007) 1.59
Probing the folding transition state structure of the villin headpiece subdomain via side chain and backbone mutagenesis. J Am Chem Soc (2009) 1.23
Using an amino acid fluorescence resonance energy transfer pair to probe protein unfolding: application to the villin headpiece subdomain and the LysM domain. Biochemistry (2008) 1.18
Hydrophobic core formation and dehydration in protein folding studied by generalized-ensemble simulations. Biophys J (2010) 0.81
On the unyielding hydrophobic core of villin headpiece. Protein Sci (2012) 0.78
Phosphorylation-induced changes in backbone dynamics of the dematin headpiece C-terminal domain. J Biomol NMR (2008) 0.78
Computational evidence that fast translation speed can increase the probability of cotranslational protein folding. Sci Rep (2015) 0.78
Structure and stability of Gyuba, a β-lactoglobulin chimera. Protein Sci (2011) 0.75
PRIDE: the proteomics identifications database. Proteomics (2005) 7.52
Human Proteinpedia enables sharing of human protein data. Nat Biotechnol (2008) 4.21
Proteomics analyses reveal the evolutionary conservation and divergence of N-terminal acetyltransferases from yeast and humans. Proc Natl Acad Sci U S A (2009) 4.09
Morphological and biochemical characterization of a human liver in a uPA-SCID mouse chimera. Hepatology (2005) 3.72
Improved visualization of protein consensus sequences by iceLogo. Nat Methods (2009) 3.64
Large-scale identification of N-terminal peptides in the halophilic archaea Halobacterium salinarum and Natronomonas pharaonis. J Proteome Res (2007) 3.30
Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides. Nat Biotechnol (2003) 3.10
Caspase-14 protects against epidermal UVB photodamage and water loss. Nat Cell Biol (2007) 2.82
Myocardial gene expression in heart failure patients treated with cardiac resynchronization therapy responders versus nonresponders. J Am Coll Cardiol (2008) 2.68
Targeted peptidecentric proteomics reveals caspase-7 as a substrate of the caspase-1 inflammasomes. Mol Cell Proteomics (2008) 2.64
Listeria monocytogenes impairs SUMOylation for efficient infection. Nature (2010) 2.57
Ins and outs of ADF/cofilin activity and regulation. Eur J Cell Biol (2008) 2.34
Caspase-specific and nonspecific in vivo protein processing during Fas-induced apoptosis. Nat Methods (2005) 2.33
Identification and functional characterization of N-terminally acetylated proteins in Drosophila melanogaster. PLoS Biol (2009) 2.25
The effect of alpha-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination. Plant Physiol (2004) 2.12
PIP(2)-PDZ domain binding controls the association of syntenin with the plasma membrane. Mol Cell (2002) 2.04
Analysis of protein processing by N-terminal proteomics reveals novel species-specific substrate determinants of granzyme B orthologs. Mol Cell Proteomics (2008) 2.01
Improvement of left ventricular function after cardiac resynchronization therapy is predicted by tissue Doppler imaging echocardiography. Circulation (2004) 2.00
Improved recovery of proteome-informative, protein N-terminal peptides by combined fractional diagonal chromatography (COFRADIC). Proteomics (2008) 1.81
Involvement of sialoadhesin in entry of porcine reproductive and respiratory syndrome virus into porcine alveolar macrophages. J Virol (2003) 1.72
Tailored echocardiographic interventricular delay programming further optimizes left ventricular performance after cardiac resynchronization therapy. Heart Rhythm (2005) 1.70
Evaluation of efficacy and safety of the anti-VWF Nanobody ALX-0681 in a preclinical baboon model of acquired thrombotic thrombocytopenic purpura. Blood (2012) 1.68
Antithrombotic drug candidate ALX-0081 shows superior preclinical efficacy and safety compared with currently marketed antiplatelet drugs. Blood (2011) 1.59
NatF contributes to an evolutionary shift in protein N-terminal acetylation and is important for normal chromosome segregation. PLoS Genet (2011) 1.57
Early and late effects of cardiac resynchronization therapy on force-frequency relation and contractility regulating gene expression in heart failure patients. Heart Rhythm (2007) 1.57
Proteomics of Arabidopsis seed germination. A comparative study of wild-type and gibberellin-deficient seeds. Plant Physiol (2002) 1.56
The actin cytoskeleton in normal and pathological cell motility. Int J Biochem Cell Biol (2004) 1.53
NMR-based characterization of metabolic alterations in hypertension using an adaptive, intelligent binning algorithm. Anal Chem (2008) 1.53
Proteomics of Medicago truncatula seed development establishes the time frame of diverse metabolic processes related to reserve accumulation. Plant Physiol (2003) 1.53
Improving the reliability and throughput of mass spectrometry-based proteomics by spectrum quality filtering. Proteomics (2006) 1.52
Structural plasticity of functional actin: pictures of actin binding protein and polymer interfaces. Structure (2003) 1.46
Normalization of nomenclature for peptide motifs as ligands of modular protein domains. FEBS Lett (2002) 1.46
Chromatographic isolation of methionine-containing peptides for gel-free proteome analysis: identification of more than 800 Escherichia coli proteins. Mol Cell Proteomics (2002) 1.42
Tobacco WLIM1 is a novel F-actin binding protein involved in actin cytoskeleton remodeling. Plant Cell (2006) 1.38
Nonmyocardial production of ST2 protein in human hypertrophy and failure is related to diastolic load. J Am Coll Cardiol (2008) 1.37
Redox proteomics of protein-bound methionine oxidation. Mol Cell Proteomics (2011) 1.37
ms_lims, a simple yet powerful open source laboratory information management system for MS-driven proteomics. Proteomics (2010) 1.36
Listeria comet tails: the actin-based motility machinery at work. Trends Cell Biol (2008) 1.35
Proteome-wide Identification of HtrA2/Omi Substrates. J Proteome Res (2007) 1.34
Functional complexes between YAP2 and ZO-2 are PDZ domain-dependent, and regulate YAP2 nuclear localization and signalling. Biochem J (2010) 1.34
Size-dependent optical properties of colloidal PbS quantum dots. ACS Nano (2009) 1.31
Gelsolin-induced epithelial cell invasion is dependent on Ras-Rac signaling. EMBO J (2002) 1.31
DBToolkit: processing protein databases for peptide-centric proteomics. Bioinformatics (2005) 1.30
A role for complexes of survival of motor neurons (SMN) protein with gemins and profilin in neurite-like cytoplasmic extensions of cultured nerve cells. Exp Cell Res (2005) 1.29
Proteome-derived peptide libraries allow detailed analysis of the substrate specificities of N(alpha)-acetyltransferases and point to hNaa10p as the post-translational actin N(alpha)-acetyltransferase. Mol Cell Proteomics (2011) 1.27
Proteome-wide substrate analysis indicates substrate exclusion as a mechanism to generate caspase-7 versus caspase-3 specificity. Mol Cell Proteomics (2009) 1.27
Selecting protein N-terminal peptides by combined fractional diagonal chromatography. Nat Protoc (2011) 1.26
Complementary positional proteomics for screening substrates of endo- and exoproteases. Nat Methods (2010) 1.25
MascotDatfile: an open-source library to fully parse and analyse MASCOT MS/MS search results. Proteomics (2007) 1.25
Comparative proteome analysis of Chlamydia trachomatis serovar A, D and L2. Proteomics (2002) 1.25
Analysis of the gamma-secretase interactome and validation of its association with tetraspanin-enriched microdomains. Nat Cell Biol (2009) 1.25
MS-driven protease substrate degradomics. Proteomics (2010) 1.23
The ins and outs of leptin receptor activation. FEBS Lett (2003) 1.18
Importance of methionine biosynthesis for Arabidopsis seed germination and seedling growth. Physiol Plant (2002) 1.17
Do we want our data raw? Including binary mass spectrometry data in public proteomics data repositories. Proteomics (2005) 1.17
A single-dose, open-label, parallel, randomized, dose-proportionality study of paliperidone after intramuscular injections of paliperidone palmitate in the deltoid or gluteal muscle in patients with schizophrenia. J Clin Pharmacol (2014) 1.16
Atypical Mowat-Wilson patient confirms the importance of the novel association between ZFHX1B/SIP1 and NuRD corepressor complex. Hum Mol Genet (2008) 1.16
In vitro and in vivo protein-bound tyrosine nitration characterized by diagonal chromatography. Mol Cell Proteomics (2009) 1.16
Characterization of a secreted Chlamydia protease. Cell Microbiol (2002) 1.16
Global differential non-gel proteomics by quantitative and stable labeling of tryptic peptides with oxygen-18. J Proteome Res (2004) 1.16
A QUICK screen for Lrrk2 interaction partners--leucine-rich repeat kinase 2 is involved in actin cytoskeleton dynamics. Mol Cell Proteomics (2010) 1.15
Tryptophan fluorescence study of the interaction of penetratin peptides with model membranes. Eur J Biochem (2002) 1.15
Surface chemistry of colloidal PbSe nanocrystals. J Am Chem Soc (2008) 1.15
The human platelet proteome mapped by peptide-centric proteomics: a functional protein profile. Proteomics (2005) 1.15
Rover: a tool to visualize and validate quantitative proteomics data from different sources. Proteomics (2010) 1.13
Functional cross-modulation between SOCS proteins can stimulate cytokine signaling. J Biol Chem (2006) 1.13
All intermediates of the arsenate reductase mechanism, including an intramolecular dynamic disulfide cascade. Proc Natl Acad Sci U S A (2002) 1.12
How thioredoxin can reduce a buried disulphide bond. J Mol Biol (2004) 1.12
Syndecan 3 intramembrane proteolysis is presenilin/gamma-secretase-dependent and modulates cytosolic signaling. J Biol Chem (2003) 1.11
Downregulation of gelsolin family proteins counteracts cancer cell invasion in vitro. Cancer Lett (2007) 1.11
Actin isoform expression patterns during mammalian development and in pathology: insights from mouse models. Cell Motil Cytoskeleton (2009) 1.11
Stable isotopic labeling in proteomics. Proteomics (2008) 1.10
A quantitative proteomics design for systematic identification of protease cleavage events. Mol Cell Proteomics (2010) 1.09
Plasmin produces an E-cadherin fragment that stimulates cancer cell invasion. Biol Chem (2002) 1.09
The chaperone-like protein HYPK acts together with NatA in cotranslational N-terminal acetylation and prevention of Huntingtin aggregation. Mol Cell Biol (2010) 1.07
Brain and other natriuretic peptides: molecular aspects. Eur J Heart Fail (2004) 1.07
The expression, processing and localization of polymorphic membrane proteins in Chlamydia pneumoniae strain CWL029. BMC Microbiol (2002) 1.06
Myopathy mutations in alpha-skeletal-muscle actin cause a range of molecular defects. J Cell Sci (2004) 1.06
Characterization of the ABCA transporter subfamily: identification of prokaryotic and eukaryotic members, phylogeny and topology. J Mol Biol (2003) 1.06
A review of COFRADIC techniques targeting protein N-terminal acetylation. BMC Proc (2009) 1.06
Tumor necrosis factor-induced modulation of glyoxalase I activities through phosphorylation by PKA results in cell death and is accompanied by the formation of a specific methylglyoxal-derived AGE. Proc Natl Acad Sci U S A (2002) 1.06
Characterization of a Listeria monocytogenes protein interfering with Rab5a. Traffic (2007) 1.05
Solution structures of the C-terminal headpiece subdomains of human villin and advillin, evaluation of headpiece F-actin-binding requirements. Protein Sci (2004) 1.05