Published in BMC Plant Biol on June 19, 2006
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Evaluating dosage compensation as a cause of duplicate gene retention in Paramecium tetraurelia. Genome Biol (2007) 1.00
Whole-genome duplications in the ancestral vertebrate are detectable in the distribution of gene family sizes of tetrapod species. J Mol Evol (2008) 0.97
Analysis of genome content evolution in pvc bacterial super-phylum: assessment of candidate genes associated with cellular organization and lifestyle. Genome Biol Evol (2012) 0.96
Phylogenetic reconstruction of ancestral character states for gene expression and mRNA splicing data. BMC Bioinformatics (2005) 0.94
The power-law distribution of gene family size is driven by the pseudogenisation rate's heterogeneity between gene families. Gene (2008) 0.93
State-of the art methodologies dictate new standards for phylogenetic analysis. BMC Evol Biol (2013) 0.92
Characterizing positive and negative selection and their phylogenetic effects. Gene (2008) 0.90
Genome-wide influence of indel Substitutions on evolution of bacteria of the PVC superphylum, revealed using a novel computational method. Genome Biol Evol (2010) 0.89
Catalysis, subcellular localization, expression and evolution of the targeting peptides degrading protease, AtPreP2. Plant Cell Physiol (2005) 0.88
Keeping the blood flowing-plasminogen activator genes and feeding behavior in vampire bats. Naturwissenschaften (2008) 0.87
Myostatin rapid sequence evolution in ruminants predates domestication. Mol Phylogenet Evol (2004) 0.86
Phylogenetic analysis of the NEEP21/calcyon/P19 family of endocytic proteins: evidence for functional evolution in the vertebrate CNS. J Mol Evol (2009) 0.85
Evaluation of models for the evolution of protein sequences and functions under structural constraint. Biophys Chem (2006) 0.84
Using evolutionary information and ancestral sequences to understand the sequence-function relationship in GLP-1 agonists. J Mol Biol (2006) 0.82
The planetary biology of cytochrome P450 aromatases. BMC Biol (2004) 0.82
Positive selection scanning reveals decoupling of enzymatic activities of carbamoyl phosphate synthetase in Helicobacter pylori. J Mol Evol (2002) 0.80
A systematic analysis of lineage-specific evolution in metabolic pathways. Gene (2006) 0.78
Lineage-specific differences in the amino acid substitution process. J Mol Biol (2010) 0.78
The phylogenetic distribution and evolution of enzymes within the thymidine kinase 2-like gene family in metazoa. J Mol Evol (2014) 0.77
Fast side chain replacement in proteins using a coarse-grained approach for evaluating the effects of mutation during evolution. J Mol Evol (2011) 0.76
A phylogenetic model for understanding the effect of gene duplication on cancer progression. Nucleic Acids Res (2013) 0.76
A phylogenetic analysis of normal modes evolution in enzymes and its relationship to enzyme function. J Mol Biol (2012) 0.76
Analysis of transitions at two-fold redundant sites in mammalian genomes. Transition redundant approach-to-equilibrium (TREx) distance metrics. BMC Evol Biol (2006) 0.76
The evolution of catalytic residues and enzyme mechanism within the bacterial nucleoside phosphorylase superfamily 1. Gene (2012) 0.76
The salmonid myostatin gene family: a novel model for investigating mechanisms that influence duplicate gene fate. BMC Evol Biol (2012) 0.75
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The global distribution and evolution of deoxyribonucleoside kinases in bacteria. Gene (2011) 0.75
Complex microsatellite dynamics in the myostatin gene within ruminants. J Mol Evol (2008) 0.75
Deoxyribonucleoside kinases in two aquatic bacteria with high specificity for thymidine and deoxyadenosine. FEMS Microbiol Lett (2012) 0.75