Published in Mol Biol Evol on August 24, 2005
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A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza A virus. Mol Biol Evol (2008) 1.96
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Evidence for widespread positive and purifying selection across the European rabbit (Oryctolagus cuniculus) genome. Mol Biol Evol (2012) 1.13
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Detecting patches of protein sites of influenza A viruses under positive selection. Mol Biol Evol (2012) 0.95
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Phylogenetic relationships and the evolution of regulatory gene sequences in the parrotfishes. Mol Phylogenet Evol (2008) 0.88
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Noise driven evolutionary waves. PLoS Comput Biol (2011) 0.87
Uncorrected nucleotide bias in mtDNA can mimic the effects of positive Darwinian selection. Mol Biol Evol (2008) 0.86
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Identification of selection signatures in livestock species. Genet Mol Biol (2014) 0.85
Lgals6, a 2-million-year-old gene in mice: a case of positive Darwinian selection and presence/absence polymorphism. Genetics (2008) 0.85
Rapid evolution of two odorant-binding protein genes, Obp57d and Obp57e, in the Drosophila melanogaster species group. Genetics (2008) 0.85
"Round up the usual suspects": a comment on nonexistent plant G protein-coupled receptors. Plant Physiol (2013) 0.85
Comparative genomics reveals long, evolutionarily conserved, low-complexity islands in yeast proteins. J Mol Evol (2006) 0.85
Evolutionary analyses of KCNQ1 and HERG voltage-gated potassium channel sequences reveal location-specific susceptibility and augmented chemical severities of arrhythmogenic mutations. BMC Evol Biol (2008) 0.85
Programmed genetic instability: a tumor-permissive mechanism for maintaining the evolvability of higher species through methylation-dependent mutation of DNA repair genes in the male germ line. Mol Biol Evol (2008) 0.84
Models of RNA virus evolution and their roles in vaccine design. Immunome Res (2010) 0.83
Transposable elements and viruses as factors in adaptation and evolution: an expansion and strengthening of the TE-Thrust hypothesis. Ecol Evol (2012) 0.83
A zinc-binding site by negative selection induces metallodrug susceptibility in an essential chaperonin. Proc Natl Acad Sci U S A (2010) 0.82
Non-random pre-transcriptional evolution in HIV-1. A refutation of the foundational conditions for neutral evolution. Genet Mol Biol (2009) 0.82
Genomic lineages of Rhizobium etli revealed by the extent of nucleotide polymorphisms and low recombination. BMC Evol Biol (2011) 0.80
Genome-wide analysis of adaptive molecular evolution in the carnivorous plant Utricularia gibba. Genome Biol Evol (2015) 0.80
Chance and necessity in cellular response to challenge. Mol Syst Biol (2007) 0.80
Development of Cymbidium ensifolium genic-SSR markers and their utility in genetic diversity and population structure analysis in cymbidiums. BMC Genet (2014) 0.80
Expression level, cellular compartment and metabolic network position all influence the average selective constraint on mammalian enzymes. BMC Evol Biol (2011) 0.79
Inference of selection based on temporal genetic differentiation in the study of highly polymorphic multigene families. PLoS One (2012) 0.79
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Gene duplication in the genome of parasitic Giardia lamblia. BMC Evol Biol (2010) 0.78
Extraordinarily low evolutionary rates of short wavelength-sensitive opsin pseudogenes. Gene (2013) 0.78
Lineage pattern, trans-species polymorphism, and selection pressure among the major lineages of feline MHC-DRB peptide-binding region. Immunogenetics (2010) 0.78
Nonhuman Primate IFITM Proteins Are Potent Inhibitors of HIV and SIV. PLoS One (2016) 0.78
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Evolutionary analysis of the highly dynamic CHEK2 duplicon in anthropoids. BMC Evol Biol (2008) 0.77
The role of the effective population size in compensatory evolution. Genome Biol Evol (2011) 0.77
Immunogenicity characterization of two ancient wheat α-gliadin peptides related to coeliac disease. Nutrients (2009) 0.76
The functional importance of sequence versus expression variability of MHC alleles in parasite resistance. Genetica (2012) 0.76
Genome-scale analysis of demographic history and adaptive selection. Protein Cell (2014) 0.75
Commentary: Free Will and Neuroscience: From Explaining Freedom Away to New Ways of Operationalizing and Measuring It. Front Hum Neurosci (2016) 0.75
Determination of antigenicity-altering patches on the major surface protein of human influenza A/H3N2 viruses. Virus Evol (2016) 0.75
A simple method for studying the molecular mechanisms of ultraviolet and violet reception in vertebrates. BMC Evol Biol (2016) 0.75
Biogeographic history and high-elevation adaptations inferred from the mitochondrial genome of Glyptosternoid fishes (Sisoridae, Siluriformes) from the southeastern Tibetan Plateau. BMC Evol Biol (2015) 0.75
Evolutionary Trends of the Transposase-Encoding Open Reading Frames A and B (orfA and orfB) of the Mycobacterial IS6110 Insertion Sequence. PLoS One (2015) 0.75
Adaptive Evolution Coupled with Retrotransposon Exaptation Allowed for the Generation of a Human-Protein-Specific Coding Gene That Promotes Cancer Cell Proliferation and Metastasis in Both Haematological Malignancies and Solid Tumours: The Extraordinary Case of MYEOV Gene. Scientifica (Cairo) (2015) 0.75
A model of evolution with constant selective pressure for regulatory DNA sites. BMC Evol Biol (2007) 0.75
Whole genome sequence analysis indicates recent diversification of mammal-associated Campylobacter fetus and implicates a genetic factor associated with H2S production. BMC Genomics (2016) 0.75
Introduction--development and phylogeny of the arthropods: Darwin's legacy. Dev Genes Evol (2006) 0.75
Gene Duplication and Protein Evolution in Tick-Host Interactions. Front Cell Infect Microbiol (2017) 0.75
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