Published in Mol Biol Evol on July 03, 2006
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Evolution of viral proteins originated de novo by overprinting. Mol Biol Evol (2012) 1.09
The relationship between dN/dS and scaled selection coefficients. Mol Biol Evol (2015) 1.03
Evidence for N-glycan shielding of antigenic sites during evolution of human influenza A virus hemagglutinin. J Virol (2012) 1.02
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More effective purifying selection on RNA viruses than in DNA viruses. Gene (2007) 0.97
Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design. J Mol Evol (2014) 0.95
Detecting patches of protein sites of influenza A viruses under positive selection. Mol Biol Evol (2012) 0.95
Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin. Philos Trans R Soc Lond B Biol Sci (2013) 0.95
Geometric Constraints Dominate the Antigenic Evolution of Influenza H3N2 Hemagglutinin. PLoS Pathog (2015) 0.92
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Natural selection for nucleotide usage at synonymous and nonsynonymous sites in influenza A virus genes. J Virol (2008) 0.89
Rapid induction of IgE responses to a worm cysteine protease during murine pre-patent schistosome infection. BMC Immunol (2010) 0.88
Subtype- and antigenic site-specific differences in biophysical influences on evolution of influenza virus hemagglutinin. Virol J (2012) 0.88
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Phylodynamics and molecular evolution of influenza A virus nucleoprotein genes in Taiwan between 1979 and 2009. PLoS One (2011) 0.80
Evolutionary dynamics of influenza A nucleoprotein (NP) lineages revealed by large-scale sequence analyses. Infect Genet Evol (2011) 0.79
Novel bioinformatics strategies for prediction of directional sequence changes in influenza virus genomes and for surveillance of potentially hazardous strains. BMC Infect Dis (2013) 0.79
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Selecting vaccine strains for H3N2 human influenza A virus. Meta Gene (2015) 0.77
A new look at an old virus: patterns of mutation accumulation in the human H1N1 influenza virus since 1918. Theor Biol Med Model (2012) 0.77
A genotype network reveals homoplastic cycles of convergent evolution in influenza A (H3N2) haemagglutinin. Proc Biol Sci (2014) 0.77
Re-emergence of H3N2 strains carrying potential neutralizing mutations at the N-linked glycosylation site at the hemagglutinin head, post the 2009 H1N1 pandemic. BMC Infect Dis (2016) 0.77
Baculovirus molecular evolution via gene turnover and recurrent positive selection of key genes. J Virol (2017) 0.76
Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin. Virus Evol (2016) 0.76
Genotype-Specific Evolution of Hepatitis E Virus. J Virol (2017) 0.76
An optimistic protein assembly from sequence reads salvaged an uncharacterized segment of mouse picobirnavirus. Sci Rep (2017) 0.75
Evolution of the neuraminidase gene of seasonal influenza A and B viruses in Thailand between 2010 and 2015. PLoS One (2017) 0.75
K-Pax2: Bayesian identification of cluster-defining amino acid positions in large sequence datasets. Microb Genom (2015) 0.75
Ebolavirus evolves in human to minimize the detection by immune cells by accumulating adaptive mutations. Virusdisease (2016) 0.75
Genome Hotspots for Nucleotide Substitutions and the Evolution of Influenza A (H1N1) Human Strains. Genome Biol Evol (2016) 0.75
Determination of antigenicity-altering patches on the major surface protein of human influenza A/H3N2 viruses. Virus Evol (2016) 0.75
One year genome evolution of Lausannevirus in allopatric versus sympatric conditions. Genome Biol Evol (2017) 0.75
Three-dimensional window analysis for detecting positive selection at structural regions of proteins. Mol Biol Evol (2004) 1.04