Published in Mol Phylogenet Evol on May 16, 2006
Baleen boom and bust: a synthesis of mysticete phylogeny, diversity and disparity. R Soc Open Sci (2015) 1.56
The comparative osteology of the petrotympanic complex (ear region) of extant baleen whales (Cetacea: Mysticeti). PLoS One (2011) 1.39
Lunge feeding in early marine reptiles and fast evolution of marine tetrapod feeding guilds. Sci Rep (2015) 1.02
Omura's whales (Balaenoptera omurai) off northwest Madagascar: ecology, behaviour and conservation needs. R Soc Open Sci (2015) 0.89
The occurrence of mtDNA heteroplasmy in multiple cetacean species. Curr Genet (2011) 0.84
A new Miocene baleen whale from the Peruvian desert. R Soc Open Sci (2016) 0.81
Back to Water: Signature of Adaptive Evolution in Cetacean Mitochondrial tRNAs. PLoS One (2016) 0.76
Structure and functions of the placenta in common minke (Balaenoptera acutorostrata), Bryde's (B. brydei) and sei (B. borealis) whales. J Reprod Dev (2015) 0.75
Molecular markers in keratins from Mysticeti whales for species identification of baleen in museum and archaeological collections. PLoS One (2017) 0.75
Integrative annotation of 21,037 human genes validated by full-length cDNA clones. PLoS Biol (2004) 7.17
Speciation through sensory drive in cichlid fish. Nature (2008) 5.52
Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc Natl Acad Sci U S A (2002) 5.48
A drug burden index to define the functional burden of medications in older people. Arch Intern Med (2007) 2.84
Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny. Proc Biol Sci (2012) 2.68
Functional noncoding sequences derived from SINEs in the mammalian genome. Genome Res (2006) 2.50
DNA C-circles are specific and quantifiable markers of alternative-lengthening-of-telomeres activity. Nat Biotechnol (2009) 2.35
The yak genome and adaptation to life at high altitude. Nat Genet (2012) 2.34
Alternative tertiary structure of tRNA for recognition by a posttranscriptional modification enzyme. Cell (2003) 2.29
Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular L1 subfamilies in ancestral primates. Genome Biol (2003) 2.19
LINEs mobilize SINEs in the eel through a shared 3' sequence. Cell (2002) 2.15
Divergent selection on opsins drives incipient speciation in Lake Victoria cichlids. PLoS Biol (2006) 2.08
Pegasoferae, an unexpected mammalian clade revealed by tracking ancient retroposon insertions. Proc Natl Acad Sci U S A (2006) 1.95
A randomized controlled trial comparing 2 types of spinal manipulation and minimal conservative medical care for adults 55 years and older with subacute or chronic low back pain. J Manipulative Physiol Ther (2009) 1.87
Cystic kidney gene seahorse regulates cilia-mediated processes and Wnt pathways. Dev Cell (2008) 1.87
Spot pattern of leopard Danio is caused by mutation in the zebrafish connexin41.8 gene. EMBO Rep (2006) 1.83
Proliferation and differentiation of bone marrow stromal cells under hypoxic conditions. Biochem Biophys Res Commun (2006) 1.72
RBP-Jkappa/SHARP recruits CtIP/CtBP corepressors to silence Notch target genes. Mol Cell Biol (2005) 1.72
Detection of Treponema pallidum in skin lesions of secondary syphilis and characterization of the inflammatory infiltrate. Dermatology (2004) 1.69
SINEs of speciation: tracking lineages with retroposons. Trends Ecol Evol (2004) 1.64
Possible involvement of SINEs in mammalian-specific brain formation. Proc Natl Acad Sci U S A (2008) 1.54
Pigment pattern in jaguar/obelix zebrafish is caused by a Kir7.1 mutation: implications for the regulation of melanosome movement. PLoS Genet (2006) 1.53
Retroposon analysis and recent geological data suggest near-simultaneous divergence of the three superorders of mammals. Proc Natl Acad Sci U S A (2009) 1.52
Establishment of a humanized model of liver using NOD/Shi-scid IL2Rgnull mice. Biochem Biophys Res Commun (2008) 1.50
Gender difference in baroreflex sensitivity to predict cardiac and cerebrovascular events in type 2 diabetic patients. Circ J (2011) 1.47
Stability of mitochondrial membrane proteins in terrestrial vertebrates predicts aerobic capacity and longevity. Genome Biol Evol (2011) 1.46
Poxviruses as possible vectors for horizontal transfer of retroposons from reptiles to mammals. Proc Natl Acad Sci U S A (2007) 1.44
Mitochondrial phylogenetics and evolution of mysticete whales. Syst Biol (2005) 1.44
A newly discovered species of living baleen whale. Nature (2003) 1.41
Estimation of effective population size of HIV-1 within a host: a pseudomaximum-likelihood approach. Genetics (2002) 1.38
A retroposon analysis of Afrotherian phylogeny. Mol Biol Evol (2005) 1.34
The evolution of the pro-domain of bone morphogenetic protein 4 (Bmp4) in an explosively speciated lineage of East African cichlid fishes. Mol Biol Evol (2002) 1.32
Rooting the eutherian tree: the power and pitfalls of phylogenomics. Genome Biol (2007) 1.31
Relationships between BK virus lineages and human populations. Microbes Infect (2006) 1.30
Antitumor activity of the selective ALK inhibitor alectinib in models of intracranial metastases. Cancer Chemother Pharmacol (2014) 1.30
Genetic evidence that the non-homologous end-joining repair pathway is involved in LINE retrotransposition. PLoS Genet (2009) 1.28
Parallelism of amino acid changes at the RH1 affecting spectral sensitivity among deep-water cichlids from Lakes Tanganyika and Malawi. Proc Natl Acad Sci U S A (2005) 1.27
Novel sex pheromone desaturases in the genomes of corn borers generated through gene duplication and retroposon fusion. Proc Natl Acad Sci U S A (2007) 1.26
The position of gnetales among seed plants: overcoming pitfalls of chloroplast phylogenomics. Mol Biol Evol (2010) 1.24
V-SINEs: a new superfamily of vertebrate SINEs that are widespread in vertebrate genomes and retain a strongly conserved segment within each repetitive unit. Genome Res (2002) 1.22
SKIP is a component of the spliceosome linking alternative splicing and the circadian clock in Arabidopsis. Plant Cell (2012) 1.21
A viral sampling design for testing the molecular clock and for estimating evolutionary rates and divergence times. Bioinformatics (2002) 1.21
Using SINEs to probe ancient explosive speciation: "hidden" radiation of African cichlids? Mol Biol Evol (2003) 1.21
dbDEMC: a database of differentially expressed miRNAs in human cancers. BMC Genomics (2010) 1.20
The effect of selection on a long wavelength-sensitive (LWS) opsin gene of Lake Victoria cichlid fishes. Proc Natl Acad Sci U S A (2002) 1.20
Root of the Eukaryota tree as inferred from combined maximum likelihood analyses of multiple molecular sequence data. Mol Biol Evol (2004) 1.19
Neuropilin-1 stimulates tumor growth by increasing fibronectin fibril assembly in the tumor microenvironment. Cancer Res (2012) 1.19
Comment on "Nuclear genomic sequences reveal that polar bears are an old and distinct bear lineage". Science (2013) 1.17
A beta-catenin-independent dorsalization pathway activated by Axin/JNK signaling and antagonized by aida. Dev Cell (2007) 1.16
Stromal cell-derived factor-1 stimulates vasculogenesis and enhances Ewing's sarcoma tumor growth in the absence of vascular endothelial growth factor. Int J Cancer (2008) 1.16
Afrotherian phylogeny as inferred from complete mitochondrial genomes. Mol Phylogenet Evol (2003) 1.16
Radiation and speciation of pelagic organisms during periods of global warming: the case of the common minke whale, Balaenoptera acutorostrata. Mol Ecol (2007) 1.16
Development of the embryo, larva and early juvenile of Nile tilapia Oreochromis niloticus (Pisces: Cichlidae). Developmental staging system. Dev Growth Differ (2007) 1.15
Topological incongruence between nuclear and chloroplast DNA trees suggesting hybridization in the urophyllum group of the genus Fagopyrum (Polygonaceae). Genes Genet Syst (2003) 1.14
Ancient SINEs from African endemic mammals. Mol Biol Evol (2003) 1.11
A branch-and-bound algorithm for the inference of ancestral amino-acid sequences when the replacement rate varies among sites: Application to the evolution of five gene families. Bioinformatics (2002) 1.11
Phylogeny, recombination, and mechanisms of stepwise mitochondrial genome reorganization in mantellid frogs from Madagascar. Mol Biol Evol (2008) 1.11
Coelacanth genomes reveal signatures for evolutionary transition from water to land. Genome Res (2013) 1.10
B chromosomes have a functional effect on female sex determination in Lake Victoria cichlid fishes. PLoS Genet (2011) 1.08
Ultrastructure of the dermal chromatophores in a lizard (Scincidae: Plestiodon latiscutatus) with conspicuous body and tail coloration. Zoolog Sci (2006) 1.07
Amotl2 is essential for cell movements in zebrafish embryo and regulates c-Src translocation. Development (2007) 1.07
A novel testis ubiquitin-binding protein gene arose by exon shuffling in hominoids. Genome Res (2007) 1.07
Molecular phylogeny and evolution of prosimians based on complete sequences of mitochondrial DNAs. Gene (2008) 1.05
Isolation and characterization of retrotransposition-competent LINEs from zebrafish. Gene (2005) 1.04
Characterization of novel Alu- and tRNA-related SINEs from the tree shrew and evolutionary implications of their origins. Mol Biol Evol (2002) 1.04
Crystal structure of archaeosine tRNA-guanine transglycosylase. J Mol Biol (2002) 1.03
Episodic evolution and adaptation of chloroplast genomes in ancestral grasses. PLoS One (2009) 1.03
Formation and maintenance of ventilatory long-term facilitation require NMDA but not non-NMDA receptors in awake rats. J Appl Physiol (1985) (2008) 1.03
Phylogeny of primary photosynthetic eukaryotes as deduced from slowly evolving nuclear genes. Mol Biol Evol (2007) 1.03
The phylogenetic position of red algae revealed by multiple nuclear genes from mitochondria-containing eukaryotes and an alternative hypothesis on the origin of plastids. J Mol Evol (2003) 1.03
Seasonal change in bacterial flora and biomass in mountain snow from the Tateyama Mountains, Japan, analyzed by 16S rRNA gene sequencing and real-time PCR. Appl Environ Microbiol (2005) 1.02
Novel SINE families from salmons validate Parahucho (Salmonidae) as a distinct genus and give evidence that SINEs can incorporate LINE-related 3'-tails of other SINEs. Mol Biol Evol (2007) 1.02
Mitochondrial phylogeny of hedgehogs and monophyly of Eulipotyphla. Mol Phylogenet Evol (2003) 1.01
Murine bone marrow-derived mesenchymal stem cells as vehicles for interleukin-12 gene delivery into Ewing sarcoma tumors. Cancer (2009) 1.01
Evolution of BK virus based on complete genome data. J Mol Evol (2006) 1.01
USP49 deubiquitinates histone H2B and regulates cotranscriptional pre-mRNA splicing. Genes Dev (2013) 1.01
Human adipose tissue-derived mesenchymal stromal cells as salvage therapy for treatment of severe refractory acute graft-vs.-host disease in two children. Pediatr Transplant (2007) 1.00
Retroposons of salmonoid fishes (Actinopterygii: Salmonoidei) and their evolution. Gene (2008) 1.00
Adaptive evolution of rbcL in Conocephalum (Hepaticae, bryophytes). Gene (2008) 1.00
Combining multiple data sets in a likelihood analysis: which models are the best? Mol Biol Evol (2002) 1.00
Senescence-unrelated impediment of osteogenesis from Flk1+ bone marrow mesenchymal stem cells induced by total body irradiation and its contribution to long-term bone and hematopoietic injury. Haematologica (2007) 0.99
Extensive mitochondrial gene arrangements in coleoid Cephalopoda and their phylogenetic implications. Mol Phylogenet Evol (2006) 0.99