Published in BMC Bioinformatics on October 23, 2006
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Kinetic transcriptome analysis reveals an essentially intact induction system in a cellulase hyper-producer Trichoderma reesei strain. Biotechnol Biofuels (2014) 0.77
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A critical function for transforming growth factor-beta, interleukin 23 and proinflammatory cytokines in driving and modulating human T(H)-17 responses. Nat Immunol (2008) 6.09
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Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. Genome Biol (2011) 2.17
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Prognostic impact of vitamin B6 metabolism in lung cancer. Cell Rep (2012) 1.45
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The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: a master regulator of carbon assimilation. BMC Genomics (2011) 1.36
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Differential regulation of the cellulase transcription factors XYR1, ACE2, and ACE1 in Trichoderma reesei strains producing high and low levels of cellulase. Eukaryot Cell (2010) 1.27
Genome-wide transcriptome analyses of silicon metabolism in Phaeodactylum tricornutum reveal the multilevel regulation of silicic acid transporters. PLoS One (2009) 1.27
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An evaluation of custom microarray applications: the oligonucleotide design challenge. Nucleic Acids Res (2009) 1.19
Multiparametric analysis of cytokine-driven human Th17 differentiation reveals a differential regulation of IL-17 and IL-22 production. Blood (2009) 1.18
Identification of a novel BET bromodomain inhibitor-sensitive, gene regulatory circuit that controls Rituximab response and tumour growth in aggressive lymphoid cancers. EMBO Mol Med (2013) 1.16
Designs and challenges for personalized medicine studies in oncology: focus on the SHIVA trial. Target Oncol (2012) 1.13
The central role of PDR1 in the foundation of yeast drug resistance. J Biol Chem (2006) 1.10
Role of heat-shock factor 2 in cerebral cortex formation and as a regulator of p35 expression. Genes Dev (2006) 1.09
Independent transcriptional reprogramming and apoptosis induction by cisplatin. Cell Cycle (2012) 1.07
High-resolution mapping of DNA breakpoints to define true recurrences among ipsilateral breast cancers. J Natl Cancer Inst (2007) 1.04
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RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans. BMC Genomics (2012) 0.96
Novel features of boundary cap cells revealed by the analysis of newly identified molecular markers. Glia (2009) 0.95
Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum. Nat Commun (2013) 0.89
Egr-1 negatively regulates expression of the sodium-calcium exchanger-1 in cardiomyocytes in vitro and in vivo. Cardiovasc Res (2005) 0.87
Adipose gene expression prior to weight loss can differentiate and weakly predict dietary responders. PLoS One (2007) 0.87
Importance of pre-analytical steps for transcriptome and RT-qPCR analyses in the context of the phase II randomised multicentre trial REMAGUS02 of neoadjuvant chemotherapy in breast cancer patients. BMC Cancer (2011) 0.87
New partners in regulation of gene expression: the enhancer of Trithorax and Polycomb Corto interacts with methylated ribosomal protein l12 via its chromodomain. PLoS Genet (2012) 0.85
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Dexrazoxane does not protect against doxorubicin-induced damage in young rats. Am J Physiol Heart Circ Physiol (2003) 0.83
Identification of Phox2b-regulated genes by expression profiling of cranial motoneuron precursors. Neural Dev (2008) 0.81
Ubiquinol-cytochrome-c reductase 7.2 kDa protein of mitochondrial complex III is steroid-responsive and increases in cardiac hypertrophy and hypertension. Can J Physiol Pharmacol (2007) 0.79
Telomere crisis in kidney epithelial cells promotes the acquisition of a microRNA signature retrieved in aggressive renal cell carcinomas. Carcinogenesis (2013) 0.79
Doelan: a solution for quality control monitoring of microarray production. Bioinformatics (2005) 0.79
Chronic beta-adrenoreceptor stimulation in vivo decreased Bcl-2 and increased Bax expression but did not activate apoptotic pathways in mouse heart. Can J Physiol Pharmacol (2004) 0.78
Tumor aromatase expression as a prognostic factor for local control in young breast cancer patients after breast-conserving treatment. Breast Cancer Res (2009) 0.78
Changes in the organization of the genome during the mammalian cell cycle. Genome Biol (2013) 0.77
Uranium perturbs signaling and iron uptake response in Arabidopsis thaliana roots. Metallomics (2014) 0.77
Dok4 is involved in Schwann cell myelination and axonal interaction in vitro. Glia (2010) 0.77
Correction: RNAi-Dependent and Independent Control of LINE1 Accumulation and Mobility in Mouse Embryonic Stem Cells. PLoS Genet (2015) 0.75
LINE-1 Activity in Facultative Heterochromatin Formation during X Chromosome Inactivation. Cell (2016) 0.75
bPeaks: a bioinformatics tool to detect transcription factor binding sites from ChIPseq data in yeasts and other organisms with small genomes. Yeast (2014) 0.75