Published in Int J Syst Evol Microbiol on December 01, 2006
Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum. Microbiol Mol Biol Rev (2007) 4.13
Genome-scale analyses of health-promoting bacteria: probiogenomics. Nat Rev Microbiol (2008) 3.25
Exploring the diversity of the bifidobacterial population in the human intestinal tract. Appl Environ Microbiol (2009) 2.34
Genomic encyclopedia of type strains of the genus Bifidobacterium. Appl Environ Microbiol (2014) 1.68
The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity. PLoS Genet (2009) 1.64
Broad conservation of milk utilization genes in Bifidobacterium longum subsp. infantis as revealed by comparative genomic hybridization. Appl Environ Microbiol (2010) 1.41
Diversity, ecology and intestinal function of bifidobacteria. Microb Cell Fact (2014) 1.35
Bifidobacterium asteroides PRL2011 genome analysis reveals clues for colonization of the insect gut. PLoS One (2012) 1.23
Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria. Microbiol Mol Biol Rev (2012) 1.19
Transmission of intestinal Bifidobacterium longum subsp. longum strains from mother to infant, determined by multilocus sequencing typing and amplified fragment length polymorphism. Appl Environ Microbiol (2011) 1.13
Comparative genomics of the Bifidobacterium breve taxon. BMC Genomics (2014) 1.07
Investigation of the evolutionary development of the genus Bifidobacterium by comparative genomics. Appl Environ Microbiol (2014) 1.03
Bifidobacterial succession and correlation networks in a large unselected cohort of mothers and their children. Appl Environ Microbiol (2012) 1.01
Comparative genomic analysis of 45 type strains of the genus Bifidobacterium: a snapshot of its genetic diversity and evolution. PLoS One (2015) 0.97
Strain-specific genotyping of Bifidobacterium animalis subsp. lactis by using single-nucleotide polymorphisms, insertions, and deletions. Appl Environ Microbiol (2009) 0.96
Quantification of human fecal bifidobacterium species by use of quantitative real-time PCR analysis targeting the groEL gene. Appl Environ Microbiol (2012) 0.96
Characterization of the serpin-encoding gene of Bifidobacterium breve 210B. Appl Environ Microbiol (2010) 0.96
Timely approaches to identify probiotic species of the genus Lactobacillus. Gut Pathog (2013) 0.95
Molecular dissection of a bifidobacterial replicon. Appl Environ Microbiol (2007) 0.93
A key genetic factor for fucosyllactose utilization affects infant gut microbiota development. Nat Commun (2016) 0.92
Pangenome analysis of Bifidobacterium longum and site-directed mutagenesis through by-pass of restriction-modification systems. BMC Genomics (2015) 0.91
Core gene set as the basis of multilocus sequence analysis of the subclass Actinobacteridae. PLoS One (2011) 0.88
Genomics of the Genus Bifidobacterium Reveals Species-Specific Adaptation to the Glycan-Rich Gut Environment. Appl Environ Microbiol (2015) 0.85
Microbial characterization of probiotics--advisory report of the Working Group "8651 Probiotics" of the Belgian Superior Health Council (SHC). Mol Nutr Food Res (2013) 0.83
Impact of genomics on the field of probiotic research: historical perspectives to modern paradigms. Antonie Van Leeuwenhoek (2014) 0.82
Pig manure contamination marker selection based on the influence of biological treatment on the dominant fecal microbial groups. Appl Environ Microbiol (2009) 0.82
Genetic diversity of bile salt hydrolases among human intestinal bifidobacteria. Curr Microbiol (2013) 0.79
Comparison of various molecular methods for rapid differentiation of intestinal bifidobacteria at the species, subspecies and strain level. BMC Microbiol (2016) 0.78
Phylogenomic Analyses and Comparative Studies on Genomes of the Bifidobacteriales: Identification of Molecular Signatures Specific for the Order Bifidobacteriales and Its Different Subclades. Front Microbiol (2016) 0.78
Detection and characterization of Bifidobacterium crudilactis and B. mongoliense able to grow during the manufacturing process of French raw milk cheeses. BMC Microbiol (2013) 0.78
Genome of Bifidobacteria and Carbohydrate Metabolism. Korean J Food Sci Anim Resour (2015) 0.78
Identification of species belonging to the Bifidobacterium genus by PCR-RFLP analysis of a hsp60 gene fragment. BMC Microbiol (2013) 0.76
Comparative Genomics Revealed Genetic Diversity and Species/Strain-Level Differences in Carbohydrate Metabolism of Three Probiotic Bifidobacterial Species. Int J Genomics (2015) 0.76
The Host Genotype and Environment Affect Strain Types of Bifidobacterium longum subsp. longum Inhabiting the Intestinal Tracts of Twins. Appl Environ Microbiol (2015) 0.75
Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio. PLoS One (2017) 0.75
Comparative genomic and phylogenomic analyses of the Bifidobacteriaceae family. BMC Genomics (2017) 0.75
Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion. Microbiol Mol Biol Rev (2004) 7.93
Gut microbiota composition correlates with diet and health in the elderly. Nature (2012) 6.94
Composition, variability, and temporal stability of the intestinal microbiota of the elderly. Proc Natl Acad Sci U S A (2010) 5.02
Genomics of Actinobacteria: tracing the evolutionary history of an ancient phylum. Microbiol Mol Biol Rev (2007) 4.13
Complete genome sequence of the prototype lactic acid bacterium Lactococcus lactis subsp. cremoris MG1363. J Bacteriol (2007) 3.43
Fatty acids from fish: the anti-inflammatory potential of long-chain omega-3 fatty acids. Nutr Rev (2010) 3.30
Genome-scale analyses of health-promoting bacteria: probiogenomics. Nat Rev Microbiol (2008) 3.25
Diversity of bifidobacteria within the infant gut microbiota. PLoS One (2012) 2.71
Multireplicon genome architecture of Lactobacillus salivarius. Proc Natl Acad Sci U S A (2006) 2.43
Taxonomy of Lactobacilli and Bifidobacteria. Curr Issues Intest Microbiol (2007) 2.36
Exploring the diversity of the bifidobacterial population in the human intestinal tract. Appl Environ Microbiol (2009) 2.34
Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor. Proc Natl Acad Sci U S A (2011) 2.22
Genome sequence of Lactobacillus helveticus, an organism distinguished by selective gene loss and insertion sequence element expansion. J Bacteriol (2007) 2.15
Genome analysis of Bifidobacterium bifidum PRL2010 reveals metabolic pathways for host-derived glycan foraging. Proc Natl Acad Sci U S A (2010) 2.14
Bifidobacterial surface-exopolysaccharide facilitates commensal-host interaction through immune modulation and pathogen protection. Proc Natl Acad Sci U S A (2012) 2.09
Characterization of the genetic locus responsible for the production of ABP-118, a novel bacteriocin produced by the probiotic bacterium Lactobacillus salivarius subsp. salivarius UCC118. Microbiology (2002) 1.92
Discovering lactic acid bacteria by genomics. Antonie Van Leeuwenhoek (2002) 1.90
The dilemma of phage taxonomy illustrated by comparative genomics of Sfi21-like Siphoviridae in lactic acid bacteria. J Bacteriol (2002) 1.71
Comparative genomics of phages and prophages in lactic acid bacteria. Antonie Van Leeuwenhoek (2002) 1.71
High-throughput sequencing reveals the incomplete, short-term recovery of infant gut microbiota following parenteral antibiotic treatment with ampicillin and gentamicin. Antimicrob Agents Chemother (2012) 1.69
The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity. PLoS Genet (2009) 1.64
Human gut microbiota and bifidobacteria: from composition to functionality. Antonie Van Leeuwenhoek (2008) 1.62
Molecular dialogue between the human gut microbiota and the host: a Lactobacillus and Bifidobacterium perspective. Cell Mol Life Sci (2013) 1.57
Assessing the fecal microbiota: an optimized ion torrent 16S rRNA gene-based analysis protocol. PLoS One (2013) 1.56
Genomics and ecological overview of the genus Bifidobacterium. Int J Food Microbiol (2010) 1.53
Diversity of the genus Lactobacillus revealed by comparative genomics of five species. Microbiology (2006) 1.52
Bacteria as vitamin suppliers to their host: a gut microbiota perspective. Curr Opin Biotechnol (2012) 1.51
Carbohydrate metabolism in Bifidobacteria. Genes Nutr (2011) 1.50
Bacteriophage Tuc2009 encodes a tail-associated cell wall-degrading activity. J Bacteriol (2004) 1.49
Comparative and functional analysis of sortase-dependent proteins in the predicted secretome of Lactobacillus salivarius UCC118. Appl Environ Microbiol (2006) 1.48
Programming infant gut microbiota: influence of dietary and environmental factors. Curr Opin Biotechnol (2010) 1.48
Screening for and identification of starch-, amylopectin-, and pullulan-degrading activities in bifidobacterial strains. Appl Environ Microbiol (2006) 1.47
Anatomy of a lactococcal phage tail. J Bacteriol (2006) 1.46
The genus Lactobacillus--a genomic basis for understanding its diversity. FEMS Microbiol Lett (2007) 1.45
Insights into the taxonomy, genetics and physiology of bifidobacteria. Antonie Van Leeuwenhoek (2004) 1.43
Microbiomic analysis of the bifidobacterial population in the human distal gut. ISME J (2009) 1.43
Host-microbe interactions that facilitate gut colonization by commensal bifidobacteria. Trends Microbiol (2012) 1.42
Structural characterization and assembly of the distal tail structure of the temperate lactococcal bacteriophage TP901-1. J Bacteriol (2005) 1.42
Genomics as a means to understand bacterial phylogeny and ecological adaptation: the case of bifidobacteria. Antonie Van Leeuwenhoek (2006) 1.41
Hemochromatosis-induced bipolar disorder: a case report. Gen Hosp Psychiatry (2011) 1.40
Identification of the lower baseplate protein as the antireceptor of the temperate lactococcal bacteriophages TP901-1 and Tuc2009. J Bacteriol (2006) 1.39
Bifidobacteria and humans: our special friends, from ecological to genomics perspectives. J Sci Food Agric (2013) 1.39
Characterization of ApuB, an extracellular type II amylopullulanase from Bifidobacterium breve UCC2003. Appl Environ Microbiol (2008) 1.38
A five-strain probiotic combination reduces pathogen shedding and alleviates disease signs in pigs challenged with Salmonella enterica Serovar Typhimurium. Appl Environ Microbiol (2007) 1.38
Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism. Proc Natl Acad Sci U S A (2012) 1.37
A topological model of the baseplate of lactococcal phage Tuc2009. J Biol Chem (2007) 1.36
Role of sortase-dependent pili of Bifidobacterium bifidum PRL2010 in modulating bacterium-host interactions. Proc Natl Acad Sci U S A (2013) 1.36
High resolution in vivo bioluminescent imaging for the study of bacterial tumour targeting. PLoS One (2012) 1.36
Diversity, ecology and intestinal function of bifidobacteria. Microb Cell Fact (2014) 1.35
Overcoming the restriction barrier to plasmid transformation and targeted mutagenesis in Bifidobacterium breve UCC2003. Microb Biotechnol (2008) 1.33
Surface microflora of four smear-ripened cheeses. Appl Environ Microbiol (2005) 1.33
Identification and characterization of a fructose phosphotransferase system in Bifidobacterium breve UCC2003. Appl Environ Microbiol (2006) 1.32
Riboflavin production in Lactococcus lactis: potential for in situ production of vitamin-enriched foods. Appl Environ Microbiol (2004) 1.32
Differences in faecal bacterial communities in coeliac and healthy children as detected by PCR and denaturing gradient gel electrophoresis. FEMS Immunol Med Microbiol (2007) 1.32
Transcription mapping as a tool in phage genomics: the case of the temperate Streptococcus thermophilus phage Sfi21. Virology (2002) 1.31
Probing direct interactions between CodY and the oppD promoter of Lactococcus lactis. J Bacteriol (2005) 1.29
Sequence and comparative genomic analysis of lactococcal bacteriophages jj50, 712 and P008: evolutionary insights into the 936 phage species. FEMS Microbiol Lett (2006) 1.28
Comparative genomics and transcriptional analysis of prophages identified in the genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei. Appl Environ Microbiol (2006) 1.28
The prophage sequences of Lactobacillus plantarum strain WCFS1. Virology (2003) 1.28
Analysis, characterization, and loci of the tuf genes in lactobacillus and bifidobacterium species and their direct application for species identification. Appl Environ Microbiol (2003) 1.28
Transcriptional regulation and characterization of a novel beta-fructofuranosidase-encoding gene from Bifidobacterium breve UCC2003. Appl Environ Microbiol (2005) 1.27
From bacterial genome to functionality; case bifidobacteria. Int J Food Microbiol (2007) 1.27
Phage lysin LysK can be truncated to its CHAP domain and retain lytic activity against live antibiotic-resistant staphylococci. Appl Environ Microbiol (2008) 1.26
Bioactive peptides from muscle sources: meat and fish. Nutrients (2011) 1.25
Comparative genomics of lactic acid bacteria reveals a niche-specific gene set. BMC Microbiol (2009) 1.24
Prophage-like elements in bifidobacteria: insights from genomics, transcription, integration, distribution, and phylogenetic analysis. Appl Environ Microbiol (2005) 1.24
Comparative genomics of the genus Bifidobacterium. Microbiology (2010) 1.24
Identification and characterization of phage-resistance genes in temperate lactococcal bacteriophages. Mol Microbiol (2002) 1.24