Published in FEMS Microbiol Ecol on April 18, 2007
Distinct soil microbial diversity under long-term organic and conventional farming. ISME J (2014) 1.31
Pyrosequencing reveals the influence of organic and conventional farming systems on bacterial communities. PLoS One (2012) 1.25
Responses of bacterial communities in arable soils in a rice-wheat cropping system to different fertilizer regimes and sampling times. PLoS One (2014) 0.99
Culturable fungi of stored 'golden delicious' apple fruits: a one-season comparison study of organic and integrated production systems in Switzerland. Microb Ecol (2008) 0.91
Soil Microbiome Is More Heterogeneous in Organic Than in Conventional Farming System. Front Microbiol (2017) 0.83
Mineral vs. Organic Amendments: Microbial Community Structure, Activity and Abundance of Agriculturally Relevant Microbes Are Driven by Long-Term Fertilization Strategies. Front Microbiol (2016) 0.83
Impacts of organic and conventional crop management on diversity and activity of free-living nitrogen fixing bacteria and total bacteria are subsidiary to temporal effects. PLoS One (2012) 0.80
Characterization of culturable bacterial endophytes and their capacity to promote plant growth from plants grown using organic or conventional practices. Front Plant Sci (2015) 0.78
Consistent responses of the microbial community structure to organic farming along the middle and lower reaches of the Yangtze River. Sci Rep (2016) 0.76
Decreasing Nitrogen Fertilizer Input Had Little Effect on Microbial Communities in Three Types of Soils. PLoS One (2016) 0.75
Organic farming enhances soil microbial abundance and activity-A meta-analysis and meta-regression. PLoS One (2017) 0.75
Microbial biodiversity of meadows under different modes of land use: catabolic and genetic fingerprinting. World J Microbiol Biotechnol (2017) 0.75
Soil fertility and biodiversity in organic farming. Science (2002) 7.28
Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proc Natl Acad Sci U S A (2011) 3.25
Influence of freeze-thaw stress on the structure and function of microbial communities and denitrifying populations in soil. Appl Environ Microbiol (2006) 2.28
Impact of long-term conventional and organic farming on the diversity of arbuscular mycorrhizal fungi. Oecologia (2004) 2.21
Impact of land use intensity on the species diversity of arbuscular mycorrhizal fungi in agroecosystems of Central Europe. Appl Environ Microbiol (2003) 2.20
Relationship between N-cycling communities and ecosystem functioning in a 50-year-old fertilization experiment. ISME J (2009) 1.98
Communities of arbuscular mycorrhizal fungi in arable soils are not necessarily low in diversity. Mol Ecol (2006) 1.83
Enhanced top soil carbon stocks under organic farming. Proc Natl Acad Sci U S A (2012) 1.82
Dynamics and functional relevance of ammonia-oxidizing archaea in two agricultural soils. Environ Microbiol (2009) 1.78
Niche specialization of terrestrial archaeal ammonia oxidizers. Proc Natl Acad Sci U S A (2011) 1.72
The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function. Appl Environ Microbiol (2003) 1.50
Rhizosphere communities of genetically modified zeaxanthin-accumulating potato plants and their parent cultivar differ less than those of different potato cultivars. Appl Environ Microbiol (2009) 1.40
General relationships between abiotic soil properties and soil biota across spatial scales and different land-use types. PLoS One (2012) 1.25
Activity profiling of ectomycorrhiza communities in two forest soils using multiple enzymatic tests. New Phytol (2005) 1.25
Abundances and potential activities of nitrogen cycling microbial communities along a chronosequence of a glacier forefield. ISME J (2010) 1.24
Biodiversity at multiple trophic levels is needed for ecosystem multifunctionality. Nature (2016) 1.21
Diversity of transcripts of nitrite reductase genes (nirK and nirS) in rhizospheres of grain legumes. Appl Environ Microbiol (2005) 1.21
PhyloChip hybridization uncovered an enormous bacterial diversity in the rhizosphere of different potato cultivars: many common and few cultivar-dependent taxa. FEMS Microbiol Ecol (2011) 1.20
A new method for the detection of alkane-monooxygenase homologous genes (alkB) in soils based on PCR-hybridization. J Microbiol Methods (2006) 1.16
Genetic diversity and phylogenetic relationships of bacteria belonging to the Ochrobactrum-Brucella group by recA and 16S rRNA gene-based comparative sequence analysis. Syst Appl Microbiol (2008) 1.14
Methane fluxes in permafrost habitats of the Lena Delta: effects of microbial community structure and organic matter quality. Environ Microbiol (2005) 1.13
Genetic and phenotypic microdiversity of Ochrobactrum spp. FEMS Microbiol Ecol (2006) 1.13
Microbial colonization of beech and spruce litter--influence of decomposition site and plant litter species on the diversity of microbial community. Microb Ecol (2006) 1.13
Effects of season and experimental warming on the bacterial community in a temperate mountain forest soil assessed by 16S rRNA gene pyrosequencing. FEMS Microbiol Ecol (2012) 1.11
RNA fingerprinting--a new method to screen for differences in plant litter degrading microbial communities. J Microbiol Methods (2004) 1.09
Increased abundance of IncP-1beta plasmids and mercury resistance genes in mercury-polluted river sediments: first discovery of IncP-1beta plasmids with a complex mer transposon as the sole accessory element. Appl Environ Microbiol (2006) 1.08
Effects of aboveground grazing on coupling among nitrifier activity, abundance and community structure. ISME J (2007) 1.06
Genotyping of Ochrobactrum anthropi by recA-based comparative sequence, PCR-RFLP, and 16S rRNA gene analysis. FEMS Microbiol Lett (2006) 1.04
Alterations in soil microbial activity and N-transformation processes due to sulfadiazine loads in pig-manure. Environ Pollut (2007) 1.03
Traditional cattle manure application determines abundance, diversity and activity of methanogenic Archaea in arable European soil. Environ Microbiol (2007) 1.02
Ranking the magnitude of crop and farming system effects on soil microbial biomass and genetic structure of bacterial communities. FEMS Microbiol Ecol (2006) 1.01
Nitrogen turnover in soil and global change. FEMS Microbiol Ecol (2011) 1.00
Short-term effects of amoxicillin on bacterial communities in manured soil. FEMS Microbiol Ecol (2007) 1.00
Recurrent soil freeze-thaw cycles enhance grassland productivity. New Phytol (2007) 1.00
Yield and economic performance of organic and conventional cotton-based farming systems--results from a field trial in India. PLoS One (2013) 0.99
Quantification of key genes steering the microbial nitrogen cycle in the rhizosphere of sorghum cultivars in tropical agroecosystems. Appl Environ Microbiol (2009) 0.99
Comparative sequence analysis of the internal transcribed spacer 1 of Ochrobactrum species. Syst Appl Microbiol (2005) 0.97
Accumulation of sulfonamide resistance genes in arable soils due to repeated application of manure containing sulfadiazine. Appl Environ Microbiol (2011) 0.97
Changes in fungal community composition in response to vegetational succession during the natural regeneration of cutover peatlands. Microb Ecol (2007) 0.97
Phospholipid etherlipid and phospholipid fatty acid fingerprints in selected euryarchaeotal monocultures for taxonomic profiling. FEMS Microbiol Lett (2002) 0.96
Endophytic root colonization of gramineous plants by Herbaspirillum frisingense. FEMS Microbiol Ecol (2008) 0.96
Response of the abundance of key soil microbial nitrogen-cycling genes to multi-factorial global changes. PLoS One (2013) 0.96
Differences in amplification efficiency of standard curves in quantitative real-time PCR assays and consequences for gene quantification in environmental samples. J Microbiol Methods (2010) 0.96
Plant litter and soil type drive abundance, activity and community structure of alkB harbouring microbes in different soil compartments. ISME J (2012) 0.95
Influence of different Sinorhizobium meliloti inocula on abundance of genes involved in nitrogen transformations in the rhizosphere of alfalfa (Medicago sativa L.). Environ Microbiol (2008) 0.95
Changes in diversity and functional gene abundances of microbial communities involved in nitrogen fixation, nitrification, and denitrification in a tidal wetland versus paddy soils cultivated for different time periods. Appl Environ Microbiol (2011) 0.95
Greenhouse gas fluxes from agricultural soils under organic and non-organic management--a global meta-analysis. Sci Total Environ (2013) 0.94
Abundance and diversity of CO2-fixing bacteria in grassland soils close to natural carbon dioxide springs. Microb Ecol (2008) 0.94
Herbaspirillum hiltneri sp. nov., isolated from surface-sterilized wheat roots. Int J Syst Evol Microbiol (2006) 0.93
Isotope array analysis of Rhodocyclales uncovers functional redundancy and versatility in an activated sludge. ISME J (2009) 0.93
Improved protocol for the simultaneous extraction and column-based separation of DNA and RNA from different soils. J Microbiol Methods (2011) 0.93
Quantification of functional genes from procaryotes in soil by PCR. J Microbiol Methods (2006) 0.92
Abundance of microbes involved in nitrogen transformation in the rhizosphere of Leucanthemopsis alpina (L.) Heywood grown in soils from different sites of the Damma glacier forefield. Microb Ecol (2010) 0.92
Estimation by PLFA of microbial community structure associated with the rhizosphere of Lygeum spartum and Piptatherum miliaceum growing in semiarid mine tailings. Microb Ecol (2009) 0.92
Effects of cattle husbandry on abundance and activity of methanogenic archaea in upland soils. ISME J (2007) 0.92
Soil amendment with Pseudomonas fluorescens CHA0: lasting effects on soil biological properties in soils low in microbial biomass and activity. Microb Ecol (2009) 0.91
Culturable fungi of stored 'golden delicious' apple fruits: a one-season comparison study of organic and integrated production systems in Switzerland. Microb Ecol (2008) 0.91
A new cultivation independent approach to detect and monitor common Trichoderma species in soils. J Microbiol Methods (2006) 0.89
Microbial community structure elucidates performance of Glyceria maxima plant microbial fuel cell. Appl Microbiol Biotechnol (2012) 0.89
Biodegradability screening of soil amendments through coupling of wavelength-scanned cavity ring-down spectroscopy to multiple dynamic chambers. Rapid Commun Mass Spectrom (2011) 0.88
Influence of land-use intensity on the spatial distribution of N-cycling microorganisms in grassland soils. FEMS Microbiol Ecol (2011) 0.87
Comparison of barley succession and take-all disease as environmental factors shaping the rhizobacterial community during take-all decline. Appl Environ Microbiol (2010) 0.87
Nutrient use efficiency and arbuscular mycorrhizal root colonisation of winter wheat cultivars in different farming systems of the DOK long-term trial. J Sci Food Agric (2010) 0.87
Effect of arbuscular mycorrhizal colonization and two levels of compost supply on nutrient uptake and flowering of pelargonium plants. Mycorrhiza (2007) 0.86
Single application of sewage sludge--impact on the quality of an alluvial agricultural soil. Chemosphere (2010) 0.86
Soil environmental conditions and microbial build-up mediate the effect of plant diversity on soil nitrifying and denitrifying enzyme activities in temperate grasslands. PLoS One (2013) 0.86
Survey of organochlorine pesticides in horticultural soils and there grown Cucurbitaceae. Chemosphere (2008) 0.85
DNA-based stable isotope probing enables the identification of active bacterial endophytes in potatoes. New Phytol (2009) 0.85
Influence of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) on ammonia-oxidizing bacteria and archaea in rhizosphere and bulk soil. Chemosphere (2011) 0.85
Effects of Elevated Atmospheric CO2 on Microbial Community Structure at the Plant-Soil Interface of Young Beech Trees (Fagus sylvatica L.) Grown at Two Sites with Contrasting Climatic Conditions. Microb Ecol (2014) 0.84
A comparative study of most probable number (MPN)-PCR vs. real-time-PCR for the measurement of abundance and assessment of diversity of alkB homologous genes in soil. J Microbiol Methods (2010) 0.84
Temporal dynamics of abundance and composition of nitrogen-fixing communities across agricultural soils. PLoS One (2013) 0.84
Dynamics of bacterial communities during the ripening process of different Croatian cheese types derived from raw ewe's milk cheeses. PLoS One (2013) 0.84
Phenotypic variation in Acidovorax radicisN35 influences plant growth promotion. FEMS Microbiol Ecol (2011) 0.84
Effects of repeated application of sulfadiazine-contaminated pig manure on the abundance and diversity of ammonia and nitrite oxidizers in the root-rhizosphere complex of pasture plants under field conditions. Front Microbiol (2013) 0.83
Optimized assay and storage conditions for enzyme activity profiling of ectomycorrhizae. Mycorrhiza (2011) 0.83
Ochrobactrum oryzae sp. nov., an endophytic bacterial species isolated from deep-water rice in India. Int J Syst Evol Microbiol (2006) 0.82
Bacterial diversity on the surface of potato tubers in soil and the influence of the plant genotype. FEMS Microbiol Ecol (2010) 0.82
Abundance and diversity of n-alkane-degrading bacteria in a forest soil co-contaminated with hydrocarbons and metals: a molecular study on alkB homologous genes. Microb Ecol (2011) 0.82
pH as a Driver for Ammonia-Oxidizing Archaea in Forest Soils. Microb Ecol (2014) 0.82
Development of a molecular approach to describe the composition of Trichoderma communities. J Microbiol Methods (2009) 0.81
Different land use intensities in grassland ecosystems drive ecology of microbial communities involved in nitrogen turnover in soil. PLoS One (2013) 0.81
Description and identification of Alnus acuminata ectomycorrhizae from Argentinean alder stands. Mycologia (2010) 0.81
Long-term impact of acid resin waste deposits on soil quality of forest areas II. Biological indicators. Sci Total Environ (2008) 0.80
Detection methods for the expression of the dissimilatory copper-containing nitrite reductase gene (DnirK) in environmental samples. J Microbiol Methods (2003) 0.80
Incorporation of carbon from decomposing litter of two pioneer plant species into microbial communities of the detritusphere. FEMS Microbiol Lett (2011) 0.80
Metabolite profiling on wheat grain to enable a distinction of samples from organic and conventional farming systems. J Sci Food Agric (2014) 0.80
Effects of forest management practices in temperate beech forests on bacterial and fungal communities involved in leaf litter degradation. Microb Ecol (2015) 0.80
Long-term impact of acid resin waste deposits on soil quality of forest areas I. Contaminants and abiotic properties. Sci Total Environ (2008) 0.80
Effects of genetically modified starch metabolism in potato plants on photosynthate fluxes into the rhizosphere and on microbial degraders of root exudates. FEMS Microbiol Ecol (2011) 0.79
Development of a simple root model to study the effects of single exudates on the development of bacterial community structure. J Microbiol Methods (2013) 0.79
Decolorization of synthetic dyes and production of manganese-dependent peroxidase by new fungal isolates. Biotechnol Lett (2003) 0.79
Ochrobactrum rhizosphaerae sp. nov. and Ochrobactrum thiophenivorans sp. nov., isolated from the environment. Int J Syst Evol Microbiol (2008) 0.79