Published in PLoS Comput Biol on June 13, 2007
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Multi-way clustering of microarray data using probabilistic sparse matrix factorization. Bioinformatics (2005) 1.18
A latent variable model for chemogenomic profiling. Bioinformatics (2005) 1.10
Expression of nicotinic acetylcholine receptors on murine alveolar macrophages. J Mol Neurosci (2006) 0.91
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Core transcriptional regulatory circuitry in human hepatocytes. Mol Syst Biol (2006) 3.15
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A hypothesis-based approach for identifying the binding specificity of regulatory proteins from chromatin immunoprecipitation data. Bioinformatics (2005) 2.52
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Coordinated binding of NF-kappaB family members in the response of human cells to lipopolysaccharide. Proc Natl Acad Sci U S A (2006) 1.96
High resolution genome wide binding event finding and motif discovery reveals transcription factor spatial binding constraints. PLoS Comput Biol (2012) 1.76
Global gene deletion analysis exploring yeast filamentous growth. Science (2012) 1.67
Control of transcription by cell size. PLoS Biol (2010) 1.61
HIF1A employs CDK8-mediator to stimulate RNAPII elongation in response to hypoxia. Cell (2013) 1.58
K-ary clustering with optimal leaf ordering for gene expression data. Bioinformatics (2003) 1.53
Deconvolving cell cycle expression data with complementary information. Bioinformatics (2004) 1.51
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Embryonic stem cell-based mapping of developmental transcriptional programs. Nat Methods (2011) 1.20
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Genome-wide maps of polyadenylation reveal dynamic mRNA 3'-end formation in mammalian cell lineages. RNA (2013) 0.94
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Semi-supervised analysis of gene expression profiles for lineage-specific development in the Caenorhabditis elegans embryo. Bioinformatics (2006) 0.86
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Engineered calcium-precipitable restriction enzyme. ACS Synth Biol (2014) 0.76
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Ruler arrays reveal haploid genomic structural variation. PLoS One (2012) 0.75
A multi-parametric flow cytometric assay to analyze DNA-protein interactions. Nucleic Acids Res (2012) 0.75
sizzled function and secreted factor network dynamics. Biol Open (2012) 0.75