Published in Environ Sci Technol on September 15, 2007
Emergence of spatial structure in cell groups and the evolution of cooperation. PLoS Comput Biol (2010) 2.35
Social evolution in multispecies biofilms. Proc Natl Acad Sci U S A (2011) 1.58
The evolution of mutualism in gut microbiota via host epithelial selection. PLoS Biol (2012) 1.55
Challenges for complex microbial ecosystems: combination of experimental approaches with mathematical modeling. Microbes Environ (2013) 1.50
Cutting through the complexity of cell collectives. Proc Biol Sci (2013) 1.20
Towards predictive models of the human gut microbiome. J Mol Biol (2014) 1.09
Adhesion as a weapon in microbial competition. ISME J (2014) 1.05
Microbial and physicochemical characteristics of compact anaerobic ammonium-oxidizing granules in an upflow anaerobic sludge blanket reactor. Appl Environ Microbiol (2010) 0.85
Four-stage dissolved oxygen strategy based on multi-scale analysis for improving spinosad yield by Saccharopolyspora spinosa ATCC49460. Microb Biotechnol (2015) 0.85
Bacterial Selection during the Formation of Early-Stage Aerobic Granules in Wastewater Treatment Systems Operated Under Wash-Out Dynamics. Front Microbiol (2012) 0.81
Variable cell morphology approach for individual-based modeling of microbial communities. Biophys J (2014) 0.79
Aerobic granules: microbial landscape and architecture, stages, and practical implications. Appl Environ Microbiol (2014) 0.78
Spatial aspects in biological system simulations. Methods Enzymol (2011) 0.77
Comparison and analysis of membrane fouling between flocculent sludge membrane bioreactor and granular sludge membrane bioreactor. PLoS One (2012) 0.75
Metabolic origins of spatial organization in the tumor microenvironment. Proc Natl Acad Sci U S A (2017) 0.75
iDynoMiCS: next-generation individual-based modelling of biofilms. Environ Microbiol (2011) 1.56
Startup of reactors for anoxic ammonium oxidation: experiences from the first full-scale anammox reactor in Rotterdam. Water Res (2007) 1.55
The membrane bioreactor: a novel tool to grow anammox bacteria as free cells. Biotechnol Bioeng (2008) 1.47
A framework for multidimensional modelling of activity and structure of multispecies biofilms. Environ Microbiol (2005) 1.37
Biofilm-control strategies based on enzymic disruption of the extracellular polymeric substance matrix--a modelling study. Microbiology (2005) 1.29
Particle-based multidimensional multispecies biofilm model. Appl Environ Microbiol (2004) 1.26
A general description of detachment for multidimensional modelling of biofilms. Biotechnol Bioeng (2005) 1.14
Three-dimensional biofilm model with individual cells and continuum EPS matrix. Biotechnol Bioeng (2006) 1.12
Effect of nitric oxide on anammox bacteria. Appl Environ Microbiol (2010) 1.02
The effect of biofilm permeability on bio-clogging of porous media. Biotechnol Bioeng (2011) 1.00
Cell flexibility affects the alignment of model myxobacteria. Biophys J (2010) 0.96
Effect of dynamic process conditions on nitrogen oxides emission from a nitrifying culture. Environ Sci Technol (2008) 0.94
A new planning and design paradigm to achieve sustainable resource recovery from wastewater. Environ Sci Technol (2009) 0.92
Computational study of the drag and oscillatory movement of biofilm streamers in fast flows. Biotechnol Bioeng (2010) 0.91
Microbial community structure in autotrophic nitrifying granules characterized by experimental and simulation analyses. Environ Microbiol (2009) 0.88
Response of anaerobic ammonium-oxidizing bacteria to hydroxylamine. Appl Environ Microbiol (2008) 0.88
Model-based evaluation of temperature and inflow variations on a partial nitrification-ANAMMOX biofilm process. Water Res (2002) 0.87
Metabolic modeling of denitrification in Agrobacterium tumefaciens: a tool to study inhibiting and activating compounds for the denitrification pathway. Front Microbiol (2012) 0.86
Kinetic modeling of phototrophic biofilms: the PHOBIA model. Biotechnol Bioeng (2007) 0.86
Relation between pore sizes of protein crystals and anisotropic solute diffusivities. J Am Chem Soc (2005) 0.86
Hydroxylamine diffusion can enhance N₂O emissions in nitrifying biofilms: a modeling study. Environ Sci Technol (2015) 0.85
Structured morphological modeling as a framework for rational strain design of Streptomyces species. Antonie Van Leeuwenhoek (2012) 0.84
Quantification of binary diffusion in protein crystals. J Phys Chem B (2005) 0.84
Mathematical modelling of tooth demineralisation and pH profiles in dental plaque. J Theor Biol (2012) 0.84
Modeling biofilm and floc diffusion processes based on analytical solution of reaction-diffusion equations. Water Res (2005) 0.84
Mass transfer enhancement in moving biofilm structures. Biophys J (2012) 0.83
An intracellular pH gradient in the anammox bacterium Kuenenia stuttgartiensis as evaluated by 31P NMR. Appl Microbiol Biotechnol (2009) 0.83
Effect of heterotrophic growth on autotrophic nitrogen removal in a granular sludge reactor. Environ Technol (2014) 0.82
Unraveling the source of nitric oxide emission during nitrification. Water Environ Res (2007) 0.80
Three-dimensional dual-morphotype species modeling of activated sludge flocs. Environ Sci Technol (2004) 0.80
Microbial fuel cells meet with external resistance. Bioresour Technol (2010) 0.80
Non-homogeneous biofilm modeling applied to bioleaching processes. Biotechnol Bioeng (2010) 0.78
Biofilm development and the dynamics of preferential flow paths in porous media. Biofouling (2013) 0.78
Multidimensional modeling of biofilm development and fluid dynamics in a hydrogen-based, membrane biofilm reactor (MBfR). Water Res (2013) 0.76
Substrate storage concepts in modeling activated sludge systems for tannery wastewaters. J Environ Sci Health A Tox Hazard Subst Environ Eng (2007) 0.75
Proposed modifications to metabolic model for glycogen-accumulating organisms under anaerobic conditions. Biotechnol Bioeng (2002) 0.75
New approaches to characterizing and understanding biofouling of spiral wound membrane systems. Water Sci Technol (2012) 0.75