Published in Dev Biol on October 06, 2007
No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini. Proc Natl Acad Sci U S A (2016) 1.53
Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade. Proc Natl Acad Sci U S A (2015) 1.51
Structure and evolution of the C. elegans embryonic endomesoderm network. Biochim Biophys Acta (2008) 1.09
The mid-developmental transition and the evolution of animal body plans. Nature (2016) 1.04
A P2X receptor from the tardigrade species Hypsibius dujardini with fast kinetics and sensitivity to zinc and copper. BMC Evol Biol (2009) 1.02
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Evolution of embryonic development in nematodes. Evodevo (2011) 0.98
Tardigrade workbench: comparing stress-related proteins, sequence-similar and functional protein clusters as well as RNA elements in tardigrades. BMC Genomics (2009) 0.98
Analysis of DNA repair and protection in the Tardigrade Ramazzottius varieornatus and Hypsibius dujardini after exposure to UVC radiation. PLoS One (2013) 0.97
Parallel expansions of Sox transcription factor group B predating the diversifications of the arthropods and jawed vertebrates. PLoS One (2011) 0.95
Transcriptome survey of the anhydrobiotic tardigrade Milnesium tardigradum in comparison with Hypsibius dujardini and Richtersius coronifer. BMC Genomics (2010) 0.93
RNA interference can be used to disrupt gene function in tardigrades. Dev Genes Evol (2012) 0.87
Neural development in the tardigrade Hypsibius dujardini based on anti-acetylated α-tubulin immunolabeling. Evodevo (2015) 0.86
Tolerance to Gamma Radiation in the Tardigrade Hypsibius dujardini from Embryo to Adult Correlate Inversely with Cellular Proliferation. PLoS One (2015) 0.84
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Effects of ionizing radiation on embryos of the tardigrade Milnesium cf. tardigradum at different stages of development. PLoS One (2013) 0.82
The Institute for the Study of Non-Model Organisms and other fantasies. Mol Biol Cell (2015) 0.78
Detection of a troponin I-like protein in non-striated muscle of the tardigrades (water bears). Bioarchitecture (2011) 0.77
How nontraditional model systems can save us. Mol Biol Cell (2015) 0.77
Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus. PLoS Biol (2017) 0.77
Suggested Involvement of PP1/PP2A Activity and De Novo Gene Expression in Anhydrobiotic Survival in a Tardigrade, Hypsibius dujardini, by Chemical Genetic Approach. PLoS One (2015) 0.76
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Novel origin of lamin-derived cytoplasmic intermediate filaments in tardigrades. Elife (2016) 0.75
Genome sequencing of a single tardigrade Hypsibius dujardini individual. Sci Data (2016) 0.75
The nervous and visual systems of onychophorans and tardigrades: learning about arthropod evolution from their closest relatives. J Comp Physiol A Neuroethol Sens Neural Behav Physiol (2017) 0.75
Can the tardigrade Hypsibius dujardini survive in the absence of the geomagnetic field? PLoS One (2017) 0.75
Evolution of genes and genomes on the Drosophila phylogeny. Nature (2007) 18.01
Extending assembly of short DNA sequences to handle error. Bioinformatics (2007) 14.46
Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans. PLoS Biol (2007) 6.18
Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas. N Engl J Med (2015) 5.71
Accurate sampling and deep sequencing of the HIV-1 protease gene using a Primer ID. Proc Natl Acad Sci U S A (2011) 4.68
The promise of DNA barcoding for taxonomy. Syst Biol (2005) 4.33
Expression of linear and novel circular forms of an INK4/ARF-associated non-coding RNA correlates with atherosclerosis risk. PLoS Genet (2010) 3.89
Engineering the Caenorhabditis elegans genome using Cas9-triggered homologous recombination. Nat Methods (2013) 3.59
De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae. Genome Res (2008) 3.41
The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature (2011) 3.29
Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma. N Engl J Med (2015) 3.00
Apical constriction: a cell shape change that can drive morphogenesis. Dev Biol (2009) 2.90
Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression. Proc Natl Acad Sci U S A (2006) 2.84
Noninvasive imaging beyond the diffraction limit of 3D dynamics in thickly fluorescent specimens. Cell (2012) 2.72
Wnt/Frizzled signaling controls C. elegans gastrulation by activating actomyosin contractility. Curr Biol (2006) 2.53
Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolates. PLoS Pathog (2011) 2.50
Triggering a cell shape change by exploiting preexisting actomyosin contractions. Science (2012) 2.41
The correlation between rDNA copy number and genome size in eukaryotes. Genome (2003) 2.26
Practical innovations for high-throughput amplicon sequencing. Nat Methods (2013) 2.25
Gene transposition as a cause of hybrid sterility in Drosophila. Science (2006) 2.18
C. elegans PAR proteins function by mobilizing and stabilizing asymmetrically localized protein complexes. Curr Biol (2004) 2.02
DNA-based species delineation in tropical beetles using mitochondrial and nuclear markers. Philos Trans R Soc Lond B Biol Sci (2005) 1.93
Mechanisms of cell positioning during C. elegans gastrulation. Development (2003) 1.77
Evidence for de novo evolution of testis-expressed genes in the Drosophila yakuba/Drosophila erecta clade. Genetics (2007) 1.75
Using RNA interference to identify genes required for RNA interference. Proc Natl Acad Sci U S A (2002) 1.63
DNA barcoding does not compete with taxonomy. Nature (2005) 1.56
Apical constriction: themes and variations on a cellular mechanism driving morphogenesis. Development (2014) 1.53
HIV-1 Populations in Semen Arise through Multiple Mechanisms. PLoS Pathog (2010) 1.47
From pixels to picograms: a beginners' guide to genome quantification by Feulgen image analysis densitometry. J Histochem Cytochem (2002) 1.46
Identification of driver genes in hepatocellular carcinoma by exome sequencing. Hepatology (2013) 1.41
FDM: a graph-based statistical method to detect differential transcription using RNA-seq data. Bioinformatics (2011) 1.41
PAR proteins regulate microtubule dynamics at the cell cortex in C. elegans. Curr Biol (2003) 1.30
Genetic changes accompanying the evolution of host specialization in Drosophila sechellia. Genetics (2008) 1.29
Origin and spread of de novo genes in Drosophila melanogaster populations. Science (2014) 1.22
Molecular population genetics of male accessory gland proteins in the Drosophila simulans complex. Genetics (2004) 1.21
Genomic effects of nucleotide substitutions in Drosophila simulans. Genetics (2002) 1.17
The forces that position a mitotic spindle asymmetrically are tethered until after the time of spindle assembly. J Cell Biol (2004) 1.17
A cell cycle timer for asymmetric spindle positioning. PLoS Biol (2009) 1.16
Mining the plant-herbivore interface with a leafmining Drosophila of Arabidopsis. Mol Ecol (2010) 1.15
Adaptive gene expression divergence inferred from population genomics. PLoS Genet (2007) 1.13
Genome size and wing parameters in passerine birds. Proc Biol Sci (2009) 1.10
Segmental expression of Pax3/7 and engrailed homologs in tardigrade development. Dev Genes Evol (2007) 1.08
De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences. PLoS Genet (2013) 1.06
RhoA activation during polarization and cytokinesis of the early Caenorhabditis elegans embryo is differentially dependent on NOP-1 and CYK-4. Mol Biol Cell (2012) 1.05
Evolution of gene expression in the Drosophila olfactory system. Mol Biol Evol (2008) 1.01
Parallel geographic variation in Drosophila melanogaster. Genetics (2014) 1.01
Evolution of an MCM complex in flies that promotes meiotic crossovers by blocking BLM helicase. Science (2012) 0.98
The effects of rapid desiccation on estimates of plant genome size. Chromosome Res (2011) 0.97
Next-generation mapping of complex traits with phenotype-based selection and introgression. Genetics (2011) 0.96
Coordinated evolution of co-expressed gene clusters in the Drosophila transcriptome. BMC Evol Biol (2008) 0.96
Culture and manipulation of embryonic cells. Methods Cell Biol (2012) 0.95
Gastrulation in C. elegans. WormBook (2005) 0.95
The genome sizes of megabats (Chiroptera: Pteropodidae) are remarkably constrained. Biol Lett (2009) 0.94
Conceptual and empirical challenges of ascribing functions to transposable elements. Am Nat (2014) 0.93
New insights into the distribution of polyploid Daphnia: the Holarctic revisited and Argentina explored. Mol Ecol (2002) 0.93
In vivo roles for Arp2/3 in cortical actin organization during C. elegans gastrulation. J Cell Sci (2009) 0.93
How signaling between cells can orient a mitotic spindle. Semin Cell Dev Biol (2011) 0.93
Evolution of a signaling nexus constrained by protein interfaces and conformational States. PLoS Comput Biol (2010) 0.93
Dynamic localization of C. elegans TPR-GoLoco proteins mediates mitotic spindle orientation by extrinsic signaling. Development (2011) 0.92
Relaxed genetic constraint is ancestral to the evolution of phenotypic plasticity. Integr Comp Biol (2012) 0.91
Asymmetric spindle positioning. Curr Opin Cell Biol (2005) 0.90
Phylogeny of Toll-like receptor signaling: adapting the innate response. PLoS One (2013) 0.90
Genome reference and sequence variation in the large repetitive central exon of human MUC5AC. Am J Respir Cell Mol Biol (2014) 0.90
Genomic analysis of the relationship between gene expression variation and DNA polymorphism in Drosophila simulans. Genome Biol (2008) 0.89
RNA interference can be used to disrupt gene function in tardigrades. Dev Genes Evol (2012) 0.87
Extracellular control of PAR protein localization during asymmetric cell division in the C. elegans embryo. Development (2010) 0.87
A robust method for transcript quantification with RNA-seq data. J Comput Biol (2013) 0.86
Overcoming redundancy: an RNAi enhancer screen for morphogenesis genes in Caenorhabditis elegans. Genetics (2011) 0.86
A locus in Drosophila sechellia affecting tolerance of a host plant toxin. Genetics (2013) 0.86
Recovery of DNA barcodes from blackfly museum specimens (Diptera: Simuliidae) using primer sets that target a variety of sequence lengths. Mol Ecol Resour (2013) 0.85
Metabolic 'engines' of flight drive genome size reduction in birds. Proc Biol Sci (2014) 0.85
Actin-based forces driving embryonic morphogenesis in Caenorhabditis elegans. Curr Opin Genet Dev (2006) 0.85
DNA barcoding of Neotropical black flies (Diptera: Simuliidae): Species identification and discovery of cryptic diversity in Mesoamerica. Zootaxa (2015) 0.84
Internalization of multiple cells during C. elegans gastrulation depends on common cytoskeletal mechanisms but different cell polarity and cell fate regulators. Dev Biol (2010) 0.84
A suite of molecular markers for identifying species, detecting introgression and describing population structure in spadefoot toads (Spea spp.). Mol Ecol Resour (2012) 0.83
Patterns of amino acid evolution in the Drosophila ananassae chimeric gene, siren, parallel those of other Adh-derived chimeras. Genetics (2008) 0.83
Preparation of samples for comparative studies of arthropod chromosomes: visualization, in situ hybridization, and genome size estimation. Methods Enzymol (2005) 0.83
Prediction of protein-protein interfaces on G-protein beta subunits reveals a novel phospholipase C beta2 binding domain. J Mol Biol (2009) 0.82
Redundant canonical and noncanonical Caenorhabditis elegans p21-activated kinase signaling governs distal tip cell migrations. G3 (Bethesda) (2013) 0.82
A rapid and simple method of detection of Blepharisma japonicum using PCR and immobilisation on FTA paper. BMC Ecol (2003) 0.82
Embryonic development: a new SPN on cell fate specification. Curr Biol (2002) 0.81
Evolutionary molecular medicine. J Mol Med (Berl) (2012) 0.81
Genome size is inversely correlated with relative brain size in parrots and cockatoos. Genome (2009) 0.81
Systematic identification of balanced transposition polymorphisms in Saccharomyces cerevisiae. PLoS Genet (2009) 0.81
Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders. Zoology (Jena) (2008) 0.81
Distinguishing ecological from evolutionary approaches to transposable elements. Biol Rev Camb Philos Soc (2013) 0.81
CIB1 depletion impairs cell survival and tumor growth in triple-negative breast cancer. Breast Cancer Res Treat (2015) 0.80
Comparative genomics of multiple strains of Pseudomonas cannabina pv. alisalensis, a potential model pathogen of both monocots and dicots. PLoS One (2013) 0.80
Suppressor analysis reveals a role for SecY in the SecA2-dependent protein export pathway of Mycobacteria. J Bacteriol (2013) 0.78
Genome size estimates for crustaceans using Feulgen image analysis densitometry of ethanol-preserved tissues. Cytometry A (2014) 0.78
MT-Toolbox: improved amplicon sequencing using molecule tags. BMC Bioinformatics (2014) 0.78
Neural tube closure: the curious case of shrinking junctions. Curr Biol (2012) 0.78
A first exploration of genome size diversity in sponges. Genome (2013) 0.78
Wnt signaling during Caenorhabditis elegans embryonic development. Methods Mol Biol (2008) 0.77
RNA interference in Caenorhabditis elegans. Methods Mol Biol (2005) 0.77
RNA interference: silencing in the cytoplasm and nucleus. Curr Opin Mol Ther (2003) 0.77
Two rapidly evolving genes contribute to male fitness in Drosophila. J Mol Evol (2013) 0.77