Published in BMC Genomics on December 19, 2007
Using RNA-Seq to profile soybean seed development from fertilization to maturity. PLoS One (2013) 1.07
Flux of transcript patterns during soybean seed development. BMC Genomics (2010) 1.06
Improved sensitivity of DNA microarrays using photonic crystal enhanced fluorescence. Anal Chem (2010) 0.95
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Nanostructured surfaces and detection instrumentation for photonic crystal enhanced fluorescence. Sensors (Basel) (2013) 0.89
Genome-wide identification of binding sites for NAC and YABBY transcription factors and co-regulated genes during soybean seedling development by ChIP-Seq and RNA-Seq. BMC Genomics (2013) 0.88
Expanding Omics Resources for Improvement of Soybean Seed Composition Traits. Front Plant Sci (2015) 0.86
Permeability of the peroxisomal membrane: lessons from the glyoxylate cycle. Front Physiol (2013) 0.82
Direct detection of transcription factors in cotyledons during seedling development using sensitive silicon-substrate photonic crystal protein arrays. Plant Physiol (2015) 0.81
Transcription factors and glyoxylate cycle genes prominent in the transition of soybean cotyledons to the first functional leaves of the seedling. Funct Integr Genomics (2014) 0.78
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Direct targeting of light signals to a promoter element-bound transcription factor. Science (2000) 5.73
Auxin-responsive gene expression: genes, promoters and regulatory factors. Plant Mol Biol (2002) 5.02
Seed dormancy and germination. Curr Opin Plant Biol (2002) 4.30
Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed. Plant J (2005) 2.97
Transcriptome and selected metabolite analyses reveal multiple points of ethylene control during tomato fruit development. Plant Cell (2005) 2.87
Lipase Activities in Castor Bean Endosperm during Germination. Plant Physiol (1974) 2.80
Gene expression profiles of Arabidopsis Cvi seeds during dormancy cycling indicate a common underlying dormancy control mechanism. Plant J (2006) 2.41
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Gramene: development and integration of trait and gene ontologies for rice. Comp Funct Genomics (2002) 2.16
The effect of alpha-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination. Plant Physiol (2004) 2.12
Reserve mobilization in the Arabidopsis endosperm fuels hypocotyl elongation in the dark, is independent of abscisic acid, and requires PHOSPHOENOLPYRUVATE CARBOXYKINASE1. Plant Cell (2004) 1.79
Re-examining the role of the glyoxylate cycle in oilseeds. Trends Plant Sci (2001) 1.73
The role of ABI3 and FUS3 loci in Arabidopsis thaliana on phase transition from late embryo development to germination. Dev Biol (2000) 1.63
Expression of a polygalacturonase associated with tomato seed germination. Plant Physiol (1999) 1.59
Proteomics of Arabidopsis seed germination. A comparative study of wild-type and gibberellin-deficient seeds. Plant Physiol (2002) 1.56
Isolation, characterization, and pericycle-specific transcriptome analyses of the novel maize lateral and seminal root initiation mutant rum1. Plant Physiol (2005) 1.55
Clustering of microarray data reveals transcript patterns associated with somatic embryogenesis in soybean. Plant Physiol (2003) 1.48
The critical role of Arabidopsis electron-transfer flavoprotein:ubiquinone oxidoreductase during dark-induced starvation. Plant Cell (2005) 1.47
Glyoxysomal Malate Synthase of Cucumber: Molecular Cloning of a cDNA and Regulation of Enzyme Synthesis during Germination. Plant Physiol (1986) 1.45
Proteomic analysis of seed dormancy in Arabidopsis. Plant Physiol (2006) 1.45
Rapid transcriptome responses of maize (Zea mays) to UV-B in irradiated and shielded tissues. Genome Biol (2004) 1.42
Microarrays for global expression constructed with a low redundancy set of 27,500 sequenced cDNAs representing an array of developmental stages and physiological conditions of the soybean plant. BMC Genomics (2004) 1.36
Arabidopsis peroxisomal citrate synthase is required for fatty acid respiration and seed germination. Plant Cell (2005) 1.35
The wp mutation of Glycine max carries a gene-fragment-rich transposon of the CACTA superfamily. Plant Cell (2005) 1.33
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Expression profiling soybean response to Pseudomonas syringae reveals new defense-related genes and rapid HR-specific downregulation of photosynthesis. Mol Plant Microbe Interact (2005) 1.32
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Gene expression programs during Brassica oleracea seed maturation, osmopriming, and germination are indicators of progression of the germination process and the stress tolerance level. Plant Physiol (2004) 1.20
Transcriptome changes in the phenylpropanoid pathway of Glycine max in response to Pseudomonas syringae infection. BMC Plant Biol (2006) 1.19
Co-ordinate regulation of genes involved in storage lipid mobilization in Arabidopsis thaliana. Biochem Soc Trans (2001) 1.18
Metabolic engineering to increase isoflavone biosynthesis in soybean seed. Phytochemistry (2003) 1.18
The effects of elevated CO2 concentration on soybean gene expression. An analysis of growing and mature leaves. Plant Physiol (2006) 1.17
Combined transcript and metabolite analysis reveals genes involved in spider mite induced volatile formation in cucumber plants. Plant Physiol (2004) 1.15
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Transcriptome analysis reveals a critical role of CHS7 and CHS8 genes for isoflavonoid synthesis in soybean seeds. Plant Physiol (2006) 1.11
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The barley cystatin gene (Icy) is regulated by DOF transcription factors in aleurone cells upon germination. J Exp Bot (2004) 0.86
Factors affecting the onset of deoxyribonucleic acid synthesis during wheat embryo germination. Study of the changes in DNA polymerases A, B and C and the pool of DNA precursors. Biochem J (1979) 0.81
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Subcellular localization studies indicate that lipoxygenases 1 to 6 are not involved in lipid mobilization during soybean germination Plant Physiol (1999) 0.78
Characterization of a maize beta-amylase cDNA clone and its expression during seed germination. Plant Physiol (1997) 0.78
Temporal and tissue localization of a cowpea (Vigna unguiculata) cystatin. Physiol Plant (2001) 0.77
cDNA cloning and expression of a gene for isocitrate lyase in pumpkin cotyledons. Plant Cell Physiol (1996) 0.77
Tissue-specific gene silencing mediated by a naturally occurring chalcone synthase gene cluster in Glycine max. Plant Cell (2004) 1.53
Clustering of microarray data reveals transcript patterns associated with somatic embryogenesis in soybean. Plant Physiol (2003) 1.48
The wp mutation of Glycine max carries a gene-fragment-rich transposon of the CACTA superfamily. Plant Cell (2005) 1.33
Expression profiling soybean response to Pseudomonas syringae reveals new defense-related genes and rapid HR-specific downregulation of photosynthesis. Mol Plant Microbe Interact (2005) 1.32
Endogenous, tissue-specific short interfering RNAs silence the chalcone synthase gene family in glycine max seed coats. Plant Cell (2009) 1.19
Transcriptome changes in the phenylpropanoid pathway of Glycine max in response to Pseudomonas syringae infection. BMC Plant Biol (2006) 1.19
Microarray analysis of iron deficiency chlorosis in near-isogenic soybean lines. BMC Genomics (2007) 1.18
The effects of elevated CO2 concentration on soybean gene expression. An analysis of growing and mature leaves. Plant Physiol (2006) 1.17
A detection instrument for enhanced-fluorescence and label-free imaging on photonic crystal surfaces. Opt Express (2009) 1.13
Transcription profiling of soybean nodulation by Bradyrhizobium japonicum. Mol Plant Microbe Interact (2008) 1.11
Using RNA-Seq to profile soybean seed development from fertilization to maturity. PLoS One (2013) 1.07
Flux of transcript patterns during soybean seed development. BMC Genomics (2010) 1.06
Soybean defense responses to the soybean aphid. New Phytol (2008) 1.03
Features of a 103-kb gene-rich region in soybean include an inverted perfect repeat cluster of CHS genes comprising the I locus. Genome (2004) 1.03
Improved sensitivity of DNA microarrays using photonic crystal enhanced fluorescence. Anal Chem (2010) 0.95
Optimizing the spatial resolution of photonic crystal label-free imaging. Appl Opt (2009) 0.94
Divergent patterns of endogenous small RNA populations from seed and vegetative tissues of Glycine max. BMC Plant Biol (2012) 0.91
The interaction of the novel 30C02 cyst nematode effector protein with a plant β-1,3-endoglucanase may suppress host defence to promote parasitism. J Exp Bot (2012) 0.90
Transcriptome response to glyphosate in sensitive and resistant soybean. J Agric Food Chem (2008) 0.87
Using photonic crystal enhanced fluorescence on quartz substrates to improve the sensitivity of DNA microarrays. Conf Proc IEEE Eng Med Biol Soc (2011) 0.77