Published in BMC Genomics on February 24, 2010
Comparative deep transcriptional profiling of four developing oilseeds. Plant J (2011) 1.47
Using RNA-Seq to profile soybean seed development from fertilization to maturity. PLoS One (2013) 1.07
Phosphoproteomic analysis of seed maturation in Arabidopsis, rapeseed, and soybean. Plant Physiol (2012) 1.04
Improved sensitivity of DNA microarrays using photonic crystal enhanced fluorescence. Anal Chem (2010) 0.95
Genome-wide identification of binding sites for NAC and YABBY transcription factors and co-regulated genes during soybean seedling development by ChIP-Seq and RNA-Seq. BMC Genomics (2013) 0.88
Sequence mining and transcript profiling to explore differentially expressed genes associated with lipid biosynthesis during soybean seed development. BMC Plant Biol (2012) 0.86
Expanding Omics Resources for Improvement of Soybean Seed Composition Traits. Front Plant Sci (2015) 0.86
Direct detection of transcription factors in cotyledons during seedling development using sensitive silicon-substrate photonic crystal protein arrays. Plant Physiol (2015) 0.81
Genomic dissection of the seed. Front Plant Sci (2014) 0.80
Expression quantitative trait loci infer the regulation of isoflavone accumulation in soybean (Glycine max L. Merr.) seed. BMC Genomics (2014) 0.80
Soybean chalcone isomerase: evolution of the fold, and the differential expression and localization of the gene family. Planta (2014) 0.79
Differential Contribution of Malic Enzymes during Soybean and Castor Seeds Maturation. PLoS One (2016) 0.77
Identification of regulatory networks and hub genes controlling soybean seed set and size using RNA sequencing analysis. J Exp Bot (2017) 0.77
A Comparison of transgenic and wild type soybean seeds: analysis of transcriptome profiles using RNA-Seq. BMC Biotechnol (2015) 0.76
Genome-wide transcriptome analyses of developing seeds from low and normal phytic acid soybean lines. BMC Genomics (2015) 0.76
Whole genome-wide transcript profiling to identify differentially expressed genes associated with seed field emergence in two soybean low phytate mutants. BMC Plant Biol (2017) 0.75
Transcriptome Profile of Near-Isogenic Soybean Lines for β-Conglycinin α-Subunit Deficiency during Seed Maturation. PLoS One (2016) 0.75
A new set of ESTs from chickpea (Cicer arietinum L.) embryo reveals two novel F-box genes, CarF-box_PP2 and CarF-box_LysM, with potential roles in seed development. PLoS One (2015) 0.75
Global transcriptome analysis and identification of genes involved in nutrients accumulation during seed development of rice tartary buckwheat (Fagopyrum Tararicum). Sci Rep (2017) 0.75
Molecular characterization of the acquisition of longevity during seed maturation in soybean. PLoS One (2017) 0.75
Endogenous and silencing-associated small RNAs in plants. Plant Cell (2002) 10.07
A concise guide to cDNA microarray analysis. Biotechniques (2000) 8.36
Arabidopsis LEAFY COTYLEDON1 is sufficient to induce embryo development in vegetative cells. Cell (1998) 4.95
The GRAS gene family in Arabidopsis: sequence characterization and basic expression analysis of the SCARECROW-LIKE genes. Plant J (1999) 4.65
Contrapuntal networks of gene expression during Arabidopsis seed filling. Plant Cell (2002) 3.33
F-box proteins in rice. Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiol (2007) 3.18
Plant nuclear factor Y (NF-Y) B subunits confer drought tolerance and lead to improved corn yields on water-limited acres. Proc Natl Acad Sci U S A (2007) 2.74
Microarray analysis of developing Arabidopsis seeds. Plant Physiol (2000) 2.62
Molecular analysis of SCARECROW function reveals a radial patterning mechanism common to root and shoot. Development (2000) 2.61
Characterization of the glycinin gene family in soybean. Plant Cell (1989) 2.44
LEAFY COTYLEDON1-LIKE defines a class of regulators essential for embryo development. Plant Cell (2003) 2.36
The effect of alpha-amanitin on the Arabidopsis seed proteome highlights the distinct roles of stored and neosynthesized mRNAs during germination. Plant Physiol (2004) 2.12
Identification and characterization of the mouse obesity gene tubby: a member of a novel gene family. Cell (1996) 2.04
Regulation of novel members of the Arabidopsis thaliana CCAAT-binding nuclear factor Y subunits. Gene (2002) 1.58
A combined proteome and transcriptome analysis of developing Medicago truncatula seeds: evidence for metabolic specialization of maternal and filial tissues. Mol Cell Proteomics (2007) 1.55
Clustering of microarray data reveals transcript patterns associated with somatic embryogenesis in soybean. Plant Physiol (2003) 1.48
Large-scale analysis of the GRAS gene family in Arabidopsis thaliana. Plant Mol Biol (2008) 1.46
Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. Plant J (2005) 1.46
OsHAP3 genes regulate chloroplast biogenesis in rice. Plant J (2003) 1.44
Molecular analyses of the Arabidopsis TUBBY-like protein gene family. Plant Physiol (2004) 1.42
Microarrays for global expression constructed with a low redundancy set of 27,500 sequenced cDNAs representing an array of developmental stages and physiological conditions of the soybean plant. BMC Genomics (2004) 1.36
HANABA TARANU is a GATA transcription factor that regulates shoot apical meristem and flower development in Arabidopsis. Plant Cell (2004) 1.35
A root-knot nematode secretory peptide functions as a ligand for a plant transcription factor. Mol Plant Microbe Interact (2006) 1.34
The BME3 (Blue Micropylar End 3) GATA zinc finger transcription factor is a positive regulator of Arabidopsis seed germination. Plant J (2005) 1.30
Genome-wide identification and expression analysis of the NF-Y family of transcription factors in Triticum aestivum. Plant Mol Biol (2007) 1.27
DNA array profiling of gene expression changes during maize embryo development. Funct Integr Genomics (2002) 1.24
Isolation and characterization of three families of auxin down-regulated cDNA clones. Plant Mol Biol (1993) 1.22
Using genomics to study legume seed development. Plant Physiol (2007) 1.22
Control of storage-product synthesis in seeds. Curr Opin Plant Biol (2004) 1.18
Identification, characterization and interaction of HAP family genes in rice. Mol Genet Genomics (2008) 1.16
Transcriptome analysis reveals a critical role of CHS7 and CHS8 genes for isoflavonoid synthesis in soybean seeds. Plant Physiol (2006) 1.11
Expression of storage-protein genes during soybean seed development. Planta (1981) 1.07
Characterization of Arabidopsis ZIM, a member of a novel plant-specific GATA factor gene family. J Exp Bot (2004) 1.05
Two SCARECROW-LIKE genes are induced in response to exogenous auxin in rooting-competent cuttings of distantly related forest species. Tree Physiol (2007) 1.05
AtHAP3b plays a crucial role in the regulation of flowering time in Arabidopsis during osmotic stress. J Biochem Mol Biol (2007) 1.05
Identification of novel pathogen-responsive cis-elements and their binding proteins in the promoter of OsWRKY13, a gene regulating rice disease resistance. Plant Cell Environ (2007) 1.04
Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics. Plant Mol Biol (2002) 1.04
Genome-wide analysis of gene expression profiles during the kernel development of maize (Zea mays L.). Genomics (2008) 1.02
Asymmetric evolution of duplicate genes encoding the CCAAT-binding factor NF-Y in plant genomes. New Phytol (2005) 1.00
Transcriptional activation mediated by binding of a plant GATA-type zinc finger protein AGP1 to the AG-motif (AGATCCAA) of the wound-inducible Myb gene NtMyb2. Plant J (2003) 0.96
Specific soybean lipoxygenases localize to discrete subcellular compartments and their mRNAs are differentially regulated by source-sink status Plant Physiol (1998) 0.96
Specific elements of the glyoxylate pathway play a significant role in the functional transition of the soybean cotyledon during seedling development. BMC Genomics (2007) 0.93
Conservation and diversification of SCARECROW in maize. Plant Mol Biol (2005) 0.85
Identification of rice TUBBY-like genes and their evolution. FEBS J (2007) 0.82
Polyadenylated RNA sequences which are reduced in concentration following auxin treatment of soybean hypocotyls. J Biol Chem (1980) 0.81
Soybean lipoxygenase-3 in complex with 4-nitrocatechol. Acta Crystallogr D Biol Crystallogr (2004) 0.81
Isolation of lipoxygenase isoforms from Glycine max embryo axes based on apparent cross-reactivity with anti-myosin antibodies. Biochim Biophys Acta (2002) 0.78
Tissue-specific gene silencing mediated by a naturally occurring chalcone synthase gene cluster in Glycine max. Plant Cell (2004) 1.53
Clustering of microarray data reveals transcript patterns associated with somatic embryogenesis in soybean. Plant Physiol (2003) 1.48
The wp mutation of Glycine max carries a gene-fragment-rich transposon of the CACTA superfamily. Plant Cell (2005) 1.33
Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome. Plant Cell (2003) 1.32
Expression profiling soybean response to Pseudomonas syringae reveals new defense-related genes and rapid HR-specific downregulation of photosynthesis. Mol Plant Microbe Interact (2005) 1.32
Endogenous, tissue-specific short interfering RNAs silence the chalcone synthase gene family in glycine max seed coats. Plant Cell (2009) 1.19
Transcriptome changes in the phenylpropanoid pathway of Glycine max in response to Pseudomonas syringae infection. BMC Plant Biol (2006) 1.19
Microarray analysis of iron deficiency chlorosis in near-isogenic soybean lines. BMC Genomics (2007) 1.18
The effects of elevated CO2 concentration on soybean gene expression. An analysis of growing and mature leaves. Plant Physiol (2006) 1.17
A detection instrument for enhanced-fluorescence and label-free imaging on photonic crystal surfaces. Opt Express (2009) 1.13
Transcription profiling of soybean nodulation by Bradyrhizobium japonicum. Mol Plant Microbe Interact (2008) 1.11
Using RNA-Seq to profile soybean seed development from fertilization to maturity. PLoS One (2013) 1.07
Soybean defense responses to the soybean aphid. New Phytol (2008) 1.03
Features of a 103-kb gene-rich region in soybean include an inverted perfect repeat cluster of CHS genes comprising the I locus. Genome (2004) 1.03
Improved sensitivity of DNA microarrays using photonic crystal enhanced fluorescence. Anal Chem (2010) 0.95
Optimizing the spatial resolution of photonic crystal label-free imaging. Appl Opt (2009) 0.94
Specific elements of the glyoxylate pathway play a significant role in the functional transition of the soybean cotyledon during seedling development. BMC Genomics (2007) 0.93
Divergent patterns of endogenous small RNA populations from seed and vegetative tissues of Glycine max. BMC Plant Biol (2012) 0.91
The interaction of the novel 30C02 cyst nematode effector protein with a plant β-1,3-endoglucanase may suppress host defence to promote parasitism. J Exp Bot (2012) 0.90
Transcriptome response to glyphosate in sensitive and resistant soybean. J Agric Food Chem (2008) 0.87
Identification and use of the sugarcane bacilliform virus enhancer in transgenic maize. BMC Plant Biol (2014) 0.77
Using photonic crystal enhanced fluorescence on quartz substrates to improve the sensitivity of DNA microarrays. Conf Proc IEEE Eng Med Biol Soc (2011) 0.77