Published in ISME J on January 24, 2008
Comparative genomics of Bradyrhizobium japonicum CPAC 15 and Bradyrhizobium diazoefficiens CPAC 7: elite model strains for understanding symbiotic performance with soybean. BMC Genomics (2014) 1.11
Complete genome and comparative analysis of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5. BMC Genomics (2010) 0.90
Symbiosis island shuffling with abundant insertion sequences in the genomes of extra-slow-growing strains of soybean bradyrhizobia. Appl Environ Microbiol (2015) 0.89
Divergent nod-containing Bradyrhizobium sp. DOA9 with a megaplasmid and its host range. Microbes Environ (2014) 0.87
Comparative genomics of aeschynomene symbionts: insights into the ecological lifestyle of nod-independent photosynthetic bradyrhizobia. Genes (Basel) (2011) 0.83
Why Close a Bacterial Genome? The Plasmid of Alteromonas Macleodii HOT1A3 is a Vector for Inter-Specific Transfer of a Flexible Genomic Island. Front Microbiol (2016) 0.82
Genome analysis of a novel Bradyrhizobium sp. DOA9 carrying a symbiotic plasmid. PLoS One (2015) 0.80
Biodegradation of a biocide (Cu-N-cyclohexyldiazenium dioxide) component of a wood preservative by a defined soil bacterial community. Appl Environ Microbiol (2010) 0.78
Changes in the composition of the human fecal microbiome after bacteriotherapy for recurrent Clostridium difficile-associated diarrhea. J Clin Gastroenterol (2010) 4.52
Standardized frozen preparation for transplantation of fecal microbiota for recurrent Clostridium difficile infection. Am J Gastroenterol (2012) 3.84
Presence and growth of naturalized Escherichia coli in temperate soils from Lake Superior watersheds. Appl Environ Microbiol (2006) 2.28
Establishing nitrogen-fixing symbiosis with legumes: how many rhizobium recipes? Trends Microbiol (2009) 1.98
High-throughput DNA sequence analysis reveals stable engraftment of gut microbiota following transplantation of previously frozen fecal bacteria. Gut Microbes (2013) 1.85
Population structure, persistence, and seasonality of autochthonous Escherichia coli in temperate, coastal forest soil from a Great Lakes watershed. Environ Microbiol (2006) 1.77
Escherichia coli in the Environment: Implications for Water Quality and Human Health. Microbes Environ (2008) 1.76
Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1. PLoS Genet (2006) 1.76
Sample size, library composition, and genotypic diversity among natural populations of Escherichia coli from different animals influence accuracy of determining sources of fecal pollution. Appl Environ Microbiol (2004) 1.60
Microbiota transplantation restores normal fecal bile acid composition in recurrent Clostridium difficile infection. Am J Physiol Gastrointest Liver Physiol (2013) 1.52
Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula. Proc Natl Acad Sci U S A (2011) 1.46
Frequency and distribution of tetracycline resistance genes in genetically diverse, nonselected, and nonclinical Escherichia coli strains isolated from diverse human and animal sources. Appl Environ Microbiol (2004) 1.36
Growth and survival of Escherichia coli and enterococci populations in the macro-alga Cladophora (Chlorophyta). FEMS Microbiol Ecol (2003) 1.30
Beach sand and sediments are temporal sinks and sources of Escherichia coli in Lake Superior. Environ Sci Technol (2007) 1.30
On the origins of cyanuric acid hydrolase: purification, substrates, and prevalence of AtzD from Pseudomonas sp. strain ADP. Appl Environ Microbiol (2003) 1.30
Transcriptional and physiological responses of Bradyrhizobium japonicum to desiccation-induced stress. J Bacteriol (2007) 1.29
Methylobacterium nodulans sp. nov., for a group of aerobic, facultatively methylotrophic, legume root-nodule-forming and nitrogen-fixing bacteria. Int J Syst Evol Microbiol (2004) 1.28
Arthrobacter aurescens TC1 metabolizes diverse s-triazine ring compounds. Appl Environ Microbiol (2002) 1.28
Intestinal lamina propria dendritic cells maintain T cell homeostasis but do not affect commensalism. J Exp Med (2013) 1.27
Relationship between phylogenetic groups, genotypic clusters, and virulence gene profiles of Escherichia coli strains from diverse human and animal sources. Appl Environ Microbiol (2007) 1.22
Purification, substrate range, and metal center of AtzC: the N-isopropylammelide aminohydrolase involved in bacterial atrazine metabolism. J Bacteriol (2002) 1.22
Genomes of the symbiotic nitrogen-fixing bacteria of legumes. Plant Physiol (2007) 1.20
Nodulation of Aeschynomene afraspera and A. indica by photosynthetic Bradyrhizobium Sp. strain ORS285: the nod-dependent versus the nod-independent symbiotic interaction. Mol Plant Microbe Interact (2011) 1.19
Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies. Genome Biol (2013) 1.18
PpsR: a multifaceted regulator of photosynthesis gene expression in purple bacteria. Mol Microbiol (2005) 1.17
An oligonucleotide microarray resource for transcriptional profiling of Bradyrhizobium japonicum. Mol Plant Microbe Interact (2007) 1.17
Biogenic formation of photoactive arsenic-sulfide nanotubes by Shewanella sp. strain HN-41. Proc Natl Acad Sci U S A (2007) 1.15
Cladophora (Chlorophyta) spp. harbor human bacterial pathogens in nearshore water of Lake Michigan. Appl Environ Microbiol (2006) 1.14
Incidence of naturally internalized bacteria in lettuce leaves. Int J Food Microbiol (2013) 1.13
Comparison of genotypic-based microbial source tracking methods requiring a host origin database. J Water Health (2003) 1.12
Aryl-homoserine lactone quorum sensing in stem-nodulating photosynthetic bradyrhizobia. Proc Natl Acad Sci U S A (2011) 1.12
Light and redox control of photosynthesis gene expression in Bradyrhizobium: dual roles of two PpsR. J Biol Chem (2004) 1.10
Whole-genome transcriptional profiling of Bradyrhizobium japonicum during chemoautotrophic growth. J Bacteriol (2008) 1.09
Use of barcoded pyrosequencing and shared OTUs to determine sources of fecal bacteria in watersheds. Environ Sci Technol (2010) 1.08
Candidate genes and genetic architecture of symbiotic and agronomic traits revealed by whole-genome, sequence-based association genetics in Medicago truncatula. PLoS One (2013) 1.08
Allophanate hydrolase, not urease, functions in bacterial cyanuric acid metabolism. Appl Environ Microbiol (2005) 1.08
Purification and characterization of allophanate hydrolase (AtzF) from Pseudomonas sp. strain ADP. J Bacteriol (2005) 1.06
Presence and sources of fecal coliform bacteria in epilithic periphyton communities of Lake Superior. Appl Environ Microbiol (2007) 1.04
Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family. J Bacteriol (2012) 1.04
Soybean metabolites regulated in root hairs in response to the symbiotic bacterium Bradyrhizobium japonicum. Plant Physiol (2010) 1.03
Phylogeny and distribution of extra-slow-growing Bradyrhizobium japonicum harboring high copy numbers of RSalpha, RSbeta and IS1631. FEMS Microbiol Ecol (2003) 1.03
Bacterial RuBisCO is required for efficient Bradyrhizobium/Aeschynomene symbiosis. PLoS One (2011) 1.03
TrzN from Arthrobacter aurescens TC1 Is a zinc amidohydrolase. J Bacteriol (2006) 1.03
Atrazine chlorohydrolase from Pseudomonas sp. strain ADP is a metalloenzyme. Biochemistry (2002) 1.03
A singular bacteriophytochrome acquired by lateral gene transfer. J Biol Chem (2007) 1.00
Applications of the rep-PCR DNA fingerprinting technique to study microbial diversity, ecology and evolution. Environ Microbiol (2009) 1.00
Large-scale transposon mutagenesis of photosynthetic Bradyrhizobium sp. strain ORS278 reveals new genetic loci putatively important for nod-independent symbiosis with Aeschynomene indica. Mol Plant Microbe Interact (2010) 0.99
The role of histidine 200 in MndD, the Mn(II)-dependent 3,4-dihydroxyphenylacetate 2,3-dioxygenase from Arthrobacter globiformis CM-2, a site-directed mutagenesis study. J Biol Inorg Chem (2005) 0.99
Large scale analysis of virulence genes in Escherichia coli strains isolated from Avalon Bay, CA. Water Res (2010) 0.98
Thermostable cyanuric acid hydrolase from Moorella thermoacetica ATCC 39073. Appl Environ Microbiol (2009) 0.98
Substrate specificity and colorimetric assay for recombinant TrzN derived from Arthrobacter aurescens TC1. Appl Environ Microbiol (2005) 0.98
Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae. PLoS Genet (2012) 0.97
Photosynthetic Bradyrhizobium Sp. strain ORS285 synthesizes 2-O-methylfucosylated lipochitooligosaccharides for nod gene-dependent interaction with Aeschynomene plants. Mol Plant Microbe Interact (2011) 0.97
Transcriptional responses of Escherichia coli K-12 and O157:H7 associated with lettuce leaves. Appl Environ Microbiol (2012) 0.97
Role of methylotrophy during symbiosis between Methylobacterium nodulans and Crotalaria podocarpa. Mol Plant Microbe Interact (2005) 0.96
Biodegradation of atrazine in transgenic plants expressing a modified bacterial atrazine chlorohydrolase (atzA) gene. Plant Biotechnol J (2005) 0.95
Population structure of Cladophora-borne Escherichia coli in nearshore water of Lake Michigan. Water Res (2007) 0.95
Functional role of Bradyrhizobium japonicum trehalose biosynthesis and metabolism genes during physiological stress and nodulation. Appl Environ Microbiol (2009) 0.94
Resolution of severe Clostridium difficile infection following sequential fecal microbiota transplantation. J Clin Gastroenterol (2013) 0.94
Transcriptional and functional responses of Escherichia coli O157:H7 growing in the lettuce rhizoplane. Food Microbiol (2013) 0.94
The occurrence of virulence traits among high-level aminoglycosides resistant Enterococcus isolates obtained from feces of humans, animals, and birds in South Korea. Int J Food Microbiol (2010) 0.93
Evolution of a bacteriophytochrome from light to redox sensor. EMBO J (2007) 0.92
A New Family of Biuret Hydrolases Involved in S-Triazine Ring Metabolism. ACS Catal (2011) 0.92
Arthrobacter aurescens TC1 atrazine catabolism genes trzN, atzB, and atzC are linked on a 160-kilobase region and are functional in Escherichia coli. Appl Environ Microbiol (2004) 0.92
Determining sources of fecal bacteria in waterways. Environ Monit Assess (2006) 0.92
Development of goose- and duck-specific DNA markers to determine sources of Escherichia coli in waterways. Appl Environ Microbiol (2006) 0.91
Influence of Hyphal Inoculum potential on the Competitive Success of Fungi Colonizing Wood. Microb Ecol (2015) 0.91
Purification and characterization of TrzF: biuret hydrolysis by allophanate hydrolase supports growth. Appl Environ Microbiol (2006) 0.91
Hydroxyatrazine N-ethylaminohydrolase (AtzB): an amidohydrolase superfamily enzyme catalyzing deamination and dechlorination. J Bacteriol (2007) 0.91
Competition between two wood-degrading fungi with distinct influences on residues. FEMS Microbiol Ecol (2012) 0.90
Peptide-mediated shape- and size-tunable synthesis of gold nanostructures. Acta Biomater (2010) 0.90
Rhizobial synthesized cytokinins contribute to but are not essential for the symbiotic interaction between photosynthetic Bradyrhizobia and Aeschynomene legumes. Mol Plant Microbe Interact (2013) 0.89
Methanogenesis facilitated by geobiochemical iron cycle in a novel syntrophic methanogenic microbial community. Environ Sci Technol (2013) 0.87
Biogenic formation of As-S nanotubes by diverse Shewanella strains. Appl Environ Microbiol (2009) 0.87
Solvent extraction characterization of bioavailability of atrazine residues in soils. J Agric Food Chem (2004) 0.86
Antimicrobial peptides targeting Gram-negative pathogens, produced and delivered by lactic acid bacteria. ACS Synth Biol (2013) 0.86
Association of toxin-producing Clostridium botulinum with the macroalga Cladophora in the Great Lakes. Environ Sci Technol (2013) 0.86
Ammonium sorption and ammonia inhibition of nitrite-oxidizing bacteria explain contrasting soil N2O production. Sci Rep (2015) 0.86
Absence of Escherichia coli phylogenetic group B2 strains in humans and domesticated animals from Jeonnam Province, Republic of Korea. Appl Environ Microbiol (2009) 0.86
Detection of homoserine lactone-like quorum sensing molecules in bradyrhizobium strains. Curr Microbiol (2005) 0.86
The Nod factor-independent symbiotic signaling pathway: development of Agrobacterium rhizogenes-mediated transformation for the legume Aeschynomene indica. Mol Plant Microbe Interact (2010) 0.85
Aeschynomene evenia, a model plant for studying the molecular genetics of the nod-independent rhizobium-legume symbiosis. Mol Plant Microbe Interact (2012) 0.85
Factors controlling long-term survival and growth of naturalized Escherichia coli populations in temperate field soils. Microbes Environ (2010) 0.85
Silica gel-encapsulated AtzA biocatalyst for atrazine biodegradation. Appl Microbiol Biotechnol (2012) 0.84
Enzymatic degradation of chlorodiamino-s-triazine. Appl Environ Microbiol (2002) 0.84
Evolution of symbiosis in the legume genus Aeschynomene. New Phytol (2013) 0.84
The population structure of Escherichia coli isolated from subtropical and temperate soils. Sci Total Environ (2012) 0.84
Nodulation gene regulation and quorum sensing control density-dependent suppression and restriction of nodulation in the Bradyrhizobium japonicum-soybean symbiosis. Appl Environ Microbiol (2008) 0.83
Isoeugenol monooxygenase and its putative regulatory gene are located in the eugenol metabolic gene cluster in Pseudomonas nitroreducens Jin1. Arch Microbiol (2010) 0.83
Proceedings of the 2013 A.S.P.E.N. Research workshop: the interface between nutrition and the gut microbiome: implications and applications for human health [corrected]. JPEN J Parenter Enteral Nutr (2013) 0.83
Influence of elevated atmospheric carbon dioxide on transcriptional responses of Bradyrhizobium japonicum in the soybean rhizoplane. Microbes Environ (2013) 0.83
Expression and functional roles of Bradyrhizobium japonicum genes involved in the utilization of inorganic and organic sulfur compounds in free-living and symbiotic conditions. Mol Plant Microbe Interact (2011) 0.83
X-ray structure and mutational analysis of the atrazine Chlorohydrolase TrzN. J Biol Chem (2010) 0.82
Biodegradation and mineralization of metolachlor and alachlor by Candida xestobii. J Agric Food Chem (2010) 0.82
Characterization of an isoeugenol monooxygenase (Iem) from Pseudomonas nitroreducens Jin1 that transforms isoeugenol to vanillin. Biosci Biotechnol Biochem (2013) 0.82
Bacterial formation of extracellular U(VI) nanowires. Chem Commun (Camb) (2011) 0.82
Control of peripheral light-harvesting complex synthesis by a bacteriophytochrome in the aerobic photosynthetic bacterium Bradyrhizobium strain BTAi1. J Bacteriol (2008) 0.82
Mineralization of the Bacillus thuringiensis Cry1Ac endotoxin in soil. J Agric Food Chem (2008) 0.82
Complete Genome Sequence of the Sesbania Symbiont and Rice Growth-Promoting Endophyte Rhizobium sp. Strain IRBG74. Genome Announc (2013) 0.82
Multi-laboratory evaluations of the performance of Catellicoccus marimammalium PCR assays developed to target gull fecal sources. Water Res (2013) 0.82