Published in Food Microbiol on March 19, 2013
Life on the outside: role of biofilms in environmental persistence of Shiga-toxin producing Escherichia coli. Front Microbiol (2014) 0.91
An optimized method for the extraction of bacterial mRNA from plant roots infected with Escherichia coli O157:H7. Front Microbiol (2014) 0.81
Biotic stress shifted structure and abundance of Enterobacteriaceae in the lettuce microbiome. PLoS One (2015) 0.81
Enteric pathogen-plant interactions: molecular connections leading to colonization and growth and implications for food safety. Microbes Environ (2014) 0.80
Whole-Transcriptome Analysis of Verocytotoxigenic Escherichia coli O157:H7 (Sakai) Suggests Plant-Species-Specific Metabolic Responses on Exposure to Spinach and Lettuce Extracts. Front Microbiol (2016) 0.77
Corrigendum: Whole-Transcriptome Analysis of Verocytotoxigenic Escherichia coli O157:H7 (Sakai) Suggests Plant-Species-Specific Metabolic Responses on Exposure to Spinach and Lettuce Extracts. Front Microbiol (2016) 0.75
Changes in the composition of the human fecal microbiome after bacteriotherapy for recurrent Clostridium difficile-associated diarrhea. J Clin Gastroenterol (2010) 4.52
Standardized frozen preparation for transplantation of fecal microbiota for recurrent Clostridium difficile infection. Am J Gastroenterol (2012) 3.84
Presence and growth of naturalized Escherichia coli in temperate soils from Lake Superior watersheds. Appl Environ Microbiol (2006) 2.28
High-throughput DNA sequence analysis reveals stable engraftment of gut microbiota following transplantation of previously frozen fecal bacteria. Gut Microbes (2013) 1.85
Population structure, persistence, and seasonality of autochthonous Escherichia coli in temperate, coastal forest soil from a Great Lakes watershed. Environ Microbiol (2006) 1.77
Escherichia coli in the Environment: Implications for Water Quality and Human Health. Microbes Environ (2008) 1.76
Secrets of soil survival revealed by the genome sequence of Arthrobacter aurescens TC1. PLoS Genet (2006) 1.76
Sample size, library composition, and genotypic diversity among natural populations of Escherichia coli from different animals influence accuracy of determining sources of fecal pollution. Appl Environ Microbiol (2004) 1.60
Microbiota transplantation restores normal fecal bile acid composition in recurrent Clostridium difficile infection. Am J Physiol Gastrointest Liver Physiol (2013) 1.52
Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula. Proc Natl Acad Sci U S A (2011) 1.46
Genetic markers unique to Listeria monocytogenes serotype 4b differentiate epidemic clone II (hot dog outbreak strains) from other lineages. Appl Environ Microbiol (2004) 1.38
Frequency and distribution of tetracycline resistance genes in genetically diverse, nonselected, and nonclinical Escherichia coli strains isolated from diverse human and animal sources. Appl Environ Microbiol (2004) 1.36
Elderberry flavonoids bind to and prevent H1N1 infection in vitro. Phytochemistry (2009) 1.33
Growth and survival of Escherichia coli and enterococci populations in the macro-alga Cladophora (Chlorophyta). FEMS Microbiol Ecol (2003) 1.30
Beach sand and sediments are temporal sinks and sources of Escherichia coli in Lake Superior. Environ Sci Technol (2007) 1.30
On the origins of cyanuric acid hydrolase: purification, substrates, and prevalence of AtzD from Pseudomonas sp. strain ADP. Appl Environ Microbiol (2003) 1.30
Transcriptional and physiological responses of Bradyrhizobium japonicum to desiccation-induced stress. J Bacteriol (2007) 1.29
Arthrobacter aurescens TC1 metabolizes diverse s-triazine ring compounds. Appl Environ Microbiol (2002) 1.28
Intestinal lamina propria dendritic cells maintain T cell homeostasis but do not affect commensalism. J Exp Med (2013) 1.27
Purification, substrate range, and metal center of AtzC: the N-isopropylammelide aminohydrolase involved in bacterial atrazine metabolism. J Bacteriol (2002) 1.22
Relationship between phylogenetic groups, genotypic clusters, and virulence gene profiles of Escherichia coli strains from diverse human and animal sources. Appl Environ Microbiol (2007) 1.22
Genomes of the symbiotic nitrogen-fixing bacteria of legumes. Plant Physiol (2007) 1.20
Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies. Genome Biol (2013) 1.18
An oligonucleotide microarray resource for transcriptional profiling of Bradyrhizobium japonicum. Mol Plant Microbe Interact (2007) 1.17
Preharvest evaluation of coliforms, Escherichia coli, Salmonella, and Escherichia coli O157:H7 in organic and conventional produce grown by Minnesota farmers. J Food Prot (2004) 1.15
Biogenic formation of photoactive arsenic-sulfide nanotubes by Shewanella sp. strain HN-41. Proc Natl Acad Sci U S A (2007) 1.15
Cladophora (Chlorophyta) spp. harbor human bacterial pathogens in nearshore water of Lake Michigan. Appl Environ Microbiol (2006) 1.14
Incidence of naturally internalized bacteria in lettuce leaves. Int J Food Microbiol (2013) 1.13
Comparison of genotypic-based microbial source tracking methods requiring a host origin database. J Water Health (2003) 1.12
Reduction of Escherichia coli O157:H7 populations in cattle by addition of colicin E7-producing E. coli to feed. Appl Environ Microbiol (2004) 1.11
Selection of recently isolated colicinogenic Escherichia coli strains inhibitory to Escherichia coli O157:H7. J Food Prot (2002) 1.10
Whole-genome transcriptional profiling of Bradyrhizobium japonicum during chemoautotrophic growth. J Bacteriol (2008) 1.09
Use of barcoded pyrosequencing and shared OTUs to determine sources of fecal bacteria in watersheds. Environ Sci Technol (2010) 1.08
Candidate genes and genetic architecture of symbiotic and agronomic traits revealed by whole-genome, sequence-based association genetics in Medicago truncatula. PLoS One (2013) 1.08
Allophanate hydrolase, not urease, functions in bacterial cyanuric acid metabolism. Appl Environ Microbiol (2005) 1.08
Longitudinal microbiological survey of fresh produce grown by farmers in the upper midwest. J Food Prot (2006) 1.08
Fur negatively regulates hns and is required for the expression of HilA and virulence in Salmonella enterica serovar Typhimurium. J Bacteriol (2010) 1.06
Purification and characterization of allophanate hydrolase (AtzF) from Pseudomonas sp. strain ADP. J Bacteriol (2005) 1.06
The Fur regulon in anaerobically grown Salmonella enterica sv. Typhimurium: identification of new Fur targets. BMC Microbiol (2011) 1.05
Bradyrhizobium elkanii rtxC gene is required for expression of symbiotic phenotypes in the final step of rhizobitoxine biosynthesis. Appl Environ Microbiol (2004) 1.04
Presence and sources of fecal coliform bacteria in epilithic periphyton communities of Lake Superior. Appl Environ Microbiol (2007) 1.04
Defining sequence space and reaction products within the cyanuric acid hydrolase (AtzD)/barbiturase protein family. J Bacteriol (2012) 1.04
Soybean metabolites regulated in root hairs in response to the symbiotic bacterium Bradyrhizobium japonicum. Plant Physiol (2010) 1.03
Atrazine chlorohydrolase from Pseudomonas sp. strain ADP is a metalloenzyme. Biochemistry (2002) 1.03
Reduction of Escherichia coli O157:H7 viability on leafy green vegetables by treatment with a bacteriophage mixture and trans-cinnamaldehyde. Food Microbiol (2010) 1.03
Phylogeny and distribution of extra-slow-growing Bradyrhizobium japonicum harboring high copy numbers of RSalpha, RSbeta and IS1631. FEMS Microbiol Ecol (2003) 1.03
TrzN from Arthrobacter aurescens TC1 Is a zinc amidohydrolase. J Bacteriol (2006) 1.03
Applications of the rep-PCR DNA fingerprinting technique to study microbial diversity, ecology and evolution. Environ Microbiol (2009) 1.00
The role of histidine 200 in MndD, the Mn(II)-dependent 3,4-dihydroxyphenylacetate 2,3-dioxygenase from Arthrobacter globiformis CM-2, a site-directed mutagenesis study. J Biol Inorg Chem (2005) 0.99
Analysis of the ArcA regulon in anaerobically grown Salmonella enterica sv. Typhimurium. BMC Microbiol (2011) 0.99
Large scale analysis of virulence genes in Escherichia coli strains isolated from Avalon Bay, CA. Water Res (2010) 0.98
Thermostable cyanuric acid hydrolase from Moorella thermoacetica ATCC 39073. Appl Environ Microbiol (2009) 0.98
Substrate specificity and colorimetric assay for recombinant TrzN derived from Arthrobacter aurescens TC1. Appl Environ Microbiol (2005) 0.98
Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae. PLoS Genet (2012) 0.97
Transcriptional responses of Escherichia coli K-12 and O157:H7 associated with lettuce leaves. Appl Environ Microbiol (2012) 0.97
Biodegradation of atrazine in transgenic plants expressing a modified bacterial atrazine chlorohydrolase (atzA) gene. Plant Biotechnol J (2005) 0.95
Population structure of Cladophora-borne Escherichia coli in nearshore water of Lake Michigan. Water Res (2007) 0.95
Functional role of Bradyrhizobium japonicum trehalose biosynthesis and metabolism genes during physiological stress and nodulation. Appl Environ Microbiol (2009) 0.94
Resolution of severe Clostridium difficile infection following sequential fecal microbiota transplantation. J Clin Gastroenterol (2013) 0.94
Characterization of colicinogenic Escherichia coli strains inhibitory to enterohemorrhagic Escherichia coli. J Food Prot (2004) 0.94
The occurrence of virulence traits among high-level aminoglycosides resistant Enterococcus isolates obtained from feces of humans, animals, and birds in South Korea. Int J Food Microbiol (2010) 0.93
Determining sources of fecal bacteria in waterways. Environ Monit Assess (2006) 0.92
Arthrobacter aurescens TC1 atrazine catabolism genes trzN, atzB, and atzC are linked on a 160-kilobase region and are functional in Escherichia coli. Appl Environ Microbiol (2004) 0.92
A New Family of Biuret Hydrolases Involved in S-Triazine Ring Metabolism. ACS Catal (2011) 0.92
Hydroxyatrazine N-ethylaminohydrolase (AtzB): an amidohydrolase superfamily enzyme catalyzing deamination and dechlorination. J Bacteriol (2007) 0.91
Influence of Hyphal Inoculum potential on the Competitive Success of Fungi Colonizing Wood. Microb Ecol (2015) 0.91
Development of goose- and duck-specific DNA markers to determine sources of Escherichia coli in waterways. Appl Environ Microbiol (2006) 0.91
Purification and characterization of TrzF: biuret hydrolysis by allophanate hydrolase supports growth. Appl Environ Microbiol (2006) 0.91
Competition between two wood-degrading fungi with distinct influences on residues. FEMS Microbiol Ecol (2012) 0.90
Peptide-mediated shape- and size-tunable synthesis of gold nanostructures. Acta Biomater (2010) 0.90
Methanogenesis facilitated by geobiochemical iron cycle in a novel syntrophic methanogenic microbial community. Environ Sci Technol (2013) 0.87
Thermal inactivation of Bacillus anthracis spores in cow's milk. Appl Environ Microbiol (2006) 0.87
Insights learned from pBTAi1, a 229-kb accessory plasmid from Bradyrhizobium sp. strain BTAi1 and prevalence of accessory plasmids in other Bradyrhizobium sp. strains. ISME J (2008) 0.87
Biogenic formation of As-S nanotubes by diverse Shewanella strains. Appl Environ Microbiol (2009) 0.87
Prevalence of shiga toxin-encoding bacteria and shiga toxin-producing Escherichia coli isolates from dairy farms and county fairs. Vet Microbiol (2006) 0.87
Solvent extraction characterization of bioavailability of atrazine residues in soils. J Agric Food Chem (2004) 0.86
Reduction of Escherichia coli O157:H7 viability on hard surfaces by treatment with a bacteriophage mixture. Int J Food Microbiol (2010) 0.86
Association of toxin-producing Clostridium botulinum with the macroalga Cladophora in the Great Lakes. Environ Sci Technol (2013) 0.86
Antimicrobial peptides targeting Gram-negative pathogens, produced and delivered by lactic acid bacteria. ACS Synth Biol (2013) 0.86
Ammonium sorption and ammonia inhibition of nitrite-oxidizing bacteria explain contrasting soil N2O production. Sci Rep (2015) 0.86
Absence of Escherichia coli phylogenetic group B2 strains in humans and domesticated animals from Jeonnam Province, Republic of Korea. Appl Environ Microbiol (2009) 0.86
Detection of homoserine lactone-like quorum sensing molecules in bradyrhizobium strains. Curr Microbiol (2005) 0.86
Factors controlling long-term survival and growth of naturalized Escherichia coli populations in temperate field soils. Microbes Environ (2010) 0.85
Silica gel-encapsulated AtzA biocatalyst for atrazine biodegradation. Appl Microbiol Biotechnol (2012) 0.84
1-Aminocyclopropane-1-carboxylate deaminase enhances Agrobacterium tumefaciens-mediated gene transfer into plant cells. Appl Environ Microbiol (2008) 0.84
Enzymatic degradation of chlorodiamino-s-triazine. Appl Environ Microbiol (2002) 0.84
The population structure of Escherichia coli isolated from subtropical and temperate soils. Sci Total Environ (2012) 0.84
Cattle-level risk factors associated with fecal shedding of Shiga toxin-encoding bacteria on dairy farms, Minnesota, USA. Can J Vet Res (2009) 0.84
Nodulation gene regulation and quorum sensing control density-dependent suppression and restriction of nodulation in the Bradyrhizobium japonicum-soybean symbiosis. Appl Environ Microbiol (2008) 0.83
Isoeugenol monooxygenase and its putative regulatory gene are located in the eugenol metabolic gene cluster in Pseudomonas nitroreducens Jin1. Arch Microbiol (2010) 0.83