Transcriptome profiling identified novel genes associated with aluminum toxicity, resistance and tolerance in Medicago truncatula.

PubWeight™: 0.97‹?› | Rank: Top 15%

🔗 View Article (PMID 18351384)

Published in Planta on March 20, 2008

Authors

Divya Chandran1, Natasha Sharopova, Sergey Ivashuta, J Stephen Gantt, Kathryn A Vandenbosch, Deborah A Samac

Author Affiliations

1: Department of Plant Biology, University of Minnesota, St Paul, MN 55108, USA.

Articles citing this

The role of the root apoplast in aluminium-induced inhibition of root elongation and in aluminium resistance of plants: a review. Ann Bot (2010) 1.66

Cell Wall Metabolism in Response to Abiotic Stress. Plants (Basel) (2015) 1.33

New insights into aluminum tolerance in rice: the ASR5 protein binds the STAR1 promoter and other aluminum-responsive genes. Mol Plant (2013) 1.00

Physiological and molecular characterization of aluminum resistance in Medicago truncatula. BMC Plant Biol (2008) 0.95

The Arabidopsis cell cycle checkpoint regulators TANMEI/ALT2 and ATR mediate the active process of aluminum-dependent root growth inhibition. Plant Cell (2012) 0.91

Comparative genome-wide transcriptional analysis of Al-responsive genes reveals novel Al tolerance mechanisms in rice. PLoS One (2012) 0.85

De Novo Transcriptome Assembly and Identification of Gene Candidates for Rapid Evolution of Soil Al Tolerance in Anthoxanthum odoratum at the Long-Term Park Grass Experiment. PLoS One (2015) 0.81

Identification of Aluminum Responsive Genes in Al-Tolerant Soybean Line PI 416937. Int J Plant Genomics (2010) 0.79

Root iTRAQ protein profile analysis of two Citrus species differing in aluminum-tolerance in response to long-term aluminum-toxicity. BMC Genomics (2015) 0.79

Aluminum induces cross-resistance of potato to Phytophthora infestans. Planta (2013) 0.79

Mechanisms on boron-induced alleviation of aluminum-toxicity in Citrus grandis seedlings at a transcriptional level revealed by cDNA-AFLP analysis. PLoS One (2015) 0.78

Aluminum-Dependent Terminal Differentiation of the Arabidopsis Root Tip Is Mediated through an ATR-, ALT2-, and SOG1-Regulated Transcriptional Response. Plant Cell (2015) 0.77

A Formate Dehydrogenase Confers Tolerance to Aluminum and Low pH. Plant Physiol (2016) 0.77

Inhibition of ethylene production by putrescine alleviates aluminium-induced root inhibition in wheat plants. Sci Rep (2016) 0.77

Root Adaptive Responses to Aluminum-Treatment Revealed by RNA-Seq in Two Citrus Species With Different Aluminum-Tolerance. Front Plant Sci (2017) 0.75

Transcriptome Analyses Reveal Candidate Genes Potentially Involved in Al Stress Response in Alfalfa. Front Plant Sci (2017) 0.75

Articles cited by this

Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci U S A (2001) 132.88

YAP1 dependent activation of TRX2 is essential for the response of Saccharomyces cerevisiae to oxidative stress by hydroperoxides. EMBO J (1994) 3.44

Agrobacterium rhizogenes-transformed roots of Medicago truncatula for the study of nitrogen-fixing and endomycorrhizal symbiotic associations. Mol Plant Microbe Interact (2001) 3.25

A gene in the multidrug and toxic compound extrusion (MATE) family confers aluminum tolerance in sorghum. Nat Genet (2007) 3.19

The involvement of cysteine proteases and protease inhibitor genes in the regulation of programmed cell death in plants. Plant Cell (1999) 2.87

New techniques enable comparative analysis of microtubule orientation, wall texture, and growth rate in intact roots of Arabidopsis. Plant Physiol (2000) 2.83

COBRA encodes a putative GPI-anchored protein, which is polarly localized and necessary for oriented cell expansion in Arabidopsis. Genes Dev (2001) 2.68

Rapid Uptake of Aluminum into Cells of Intact Soybean Root Tips (A Microanalytical Study Using Secondary Ion Mass Spectrometry). Plant Physiol (1994) 2.63

Knockout of Arabidopsis accelerated-cell-death11 encoding a sphingosine transfer protein causes activation of programmed cell death and defense. Genes Dev (2002) 2.51

PLANT CELL WALL PROTEINS. Annu Rev Plant Physiol Plant Mol Biol (1998) 2.47

The FRD3-mediated efflux of citrate into the root vasculature is necessary for efficient iron translocation. Plant Physiol (2007) 2.47

Nitric oxide and salicylic acid signaling in plant defense. Proc Natl Acad Sci U S A (2000) 2.47

The molecular physiology of heavy metal transport in the Zn/Cd hyperaccumulator Thlaspi caerulescens. Proc Natl Acad Sci U S A (2000) 2.27

An aluminum-activated citrate transporter in barley. Plant Cell Physiol (2007) 2.24

Exploring root symbiotic programs in the model legume Medicago truncatula using EST analysis. Nucleic Acids Res (2002) 1.99

Aluminum induces oxidative stress genes in Arabidopsis thaliana. Plant Physiol (1998) 1.94

Effect of pectin methylesterase gene expression on pea root development. Plant Cell (1999) 1.92

Lipid peroxidation is an early symptom triggered by aluminum, but not the primary cause of elongation inhibition in pea roots. Plant Physiol (2001) 1.82

Proline suppresses apoptosis in the fungal pathogen Colletotrichum trifolii. Proc Natl Acad Sci U S A (2005) 1.70

ALS3 encodes a phloem-localized ABC transporter-like protein that is required for aluminum tolerance in Arabidopsis. Plant J (2005) 1.60

Aluminum targets elongating cells by reducing cell wall extensibility in wheat roots. Plant Cell Physiol (2004) 1.60

Transcript analysis of early nodulation events in Medicago truncatula. Plant Physiol (2005) 1.49

Arabidopsis ALS1 encodes a root tip and stele localized half type ABC transporter required for root growth in an aluminum toxic environment. Planta (2006) 1.43

The roles of organic anion permeases in aluminium resistance and mineral nutrition. FEBS Lett (2007) 1.40

Transcriptome profiling in root nodules and arbuscular mycorrhiza identifies a collection of novel genes induced during Medicago truncatula root endosymbioses. Mol Plant Microbe Interact (2004) 1.38

Aluminum rapidly depolymerizes cortical microtubules and depolarizes the plasma membrane: evidence that these responses are mediated by a glutamate receptor. Plant Cell Physiol (2003) 1.38

Roles for mannitol and mannitol dehydrogenase in active oxygen-mediated plant defense. Proc Natl Acad Sci U S A (1998) 1.26

Differential expression of members of the annexin multigene family in Arabidopsis. Plant Physiol (2001) 1.26

AtBAG6, a novel calmodulin-binding protein, induces programmed cell death in yeast and plants. Cell Death Differ (2006) 1.25

Aluminum-Induced Genes (Induction by Toxic Metals, Low Calcium, and Wounding and Pattern of Expression in Root Tips). Plant Physiol (1995) 1.22

Aluminum-induced oxidative stress in maize. Phytochemistry (2003) 1.21

Alterations in the cytoskeleton accompany aluminum-induced growth inhibition and morphological changes in primary roots of maize Plant Physiol (1998) 1.17

Aluminum accumulation at nuclei of cells in the root tip. Fluorescence detection using lumogallion and confocal laser scanning microscopy. Plant Physiol (2000) 1.15

cDNA clones encoding 1,3-beta-glucanase and a fimbrin-like cytoskeletal protein are induced by Al toxicity in wheat roots. Plant Physiol (1997) 1.15

Stress-induced cell reprogramming. A role for global genome regulation? Plant Physiol (2004) 1.09

Characterization of oxalate oxidase and cell death in Al-sensitive and tolerant wheat roots. Plant Cell Physiol (2001) 1.07

Isolation and characterization of wheat aluminum-regulated genes: possible involvement of aluminum as a pathogenesis response elicitor. Planta (1998) 1.05

Aluminum-induced ethylene production is associated with inhibition of root elongation in Lotus japonicus L. Plant Cell Physiol (2007) 1.03

The expression of an extensin-like protein correlates with cellular tip growth in tomato. Plant Physiol (2002) 1.01

The Medicago truncatula MtAnn1 gene encoding an annexin is induced by Nod factors and during the symbiotic interaction with Rhizobium meliloti. Mol Plant Microbe Interact (1998) 0.99

Structures and functions of annexins in plants. Cell Mol Life Sci (1997) 0.97

Insights into symbiotic nitrogen fixation in Medicago truncatula. Mol Plant Microbe Interact (2006) 0.96

Identification of aluminium-regulated genes by cDNA-AFLP in rice (Oryza sativa L.): aluminium-regulated genes for the metabolism of cell wall components. J Exp Bot (2003) 0.95

The Nod factor-elicited annexin MtAnn1 is preferentially localised at the nuclear periphery in symbiotically activated root tissues of Medicago truncatula. Plant J (2002) 0.93

Aluminium-induced growth inhibition is associated with impaired efflux and influx of H+ across the plasma membrane in root apices of squash (Cucurbita pepo). J Exp Bot (2002) 0.92

A gene encoding multidrug resistance (MDR)-like protein is induced by aluminum and inhibitors of calcium flux in wheat. Plant Cell Physiol (2002) 0.91

An Arabidopsis thaliana pectin acetylesterase gene is upregulated in nematode feeding sites induced by root-knot and cyst nematodes. Mol Plant Microbe Interact (2002) 0.89

An intracellular mechanism of aluminum tolerance associated with high antioxidant status in cultured tobacco cells. J Inorg Biochem (2003) 0.87

A new class of proteins capable of binding transition metals. Plant Mol Biol (1999) 0.87

Secretion as a key component of gravitropic growth: implications for annexin involvement in differential growth. Gravit Space Biol Bull (2005) 0.83

Root growth inhibition by aluminum is probably caused by cell death due to peroxidase-mediated hydrogen peroxide production. Protoplasma (2004) 0.77

Articles by these authors

Lack of detectable oral bioavailability of plant microRNAs after feeding in mice. Nat Biotechnol (2013) 1.90

Genome-wide identification of nodule-specific transcripts in the model legume Medicago truncatula. Plant Physiol (2002) 1.89

Analysis of plant-derived miRNAs in animal small RNA datasets. BMC Genomics (2012) 1.52

Signaling of phosphorus deficiency-induced gene expression in white lupin requires sugar and phloem transport. Plant J (2005) 1.50

Recent advances in legume transformation. Plant Physiol (2003) 1.31

Functional analysis of LjSUT4, a vacuolar sucrose transporter from Lotus japonicus. Plant Mol Biol (2008) 1.28

RNA interference identifies a calcium-dependent protein kinase involved in Medicago truncatula root development. Plant Cell (2005) 1.26

LIN, a Medicago truncatula gene required for nodule differentiation and persistence of rhizobial infections. Plant Physiol (2004) 1.24

Posttranscriptional gene silencing in nuclei. Proc Natl Acad Sci U S A (2010) 1.23

Medicago truncatula Vapyrin is a novel protein required for arbuscular mycorrhizal symbiosis. Plant J (2009) 1.23

The transcription factor MtSERF1 of the ERF subfamily identified by transcriptional profiling is required for somatic embryogenesis induced by auxin plus cytokinin in Medicago truncatula. Plant Physiol (2008) 1.21

Spatial variation in frequency and intensity of antibiotic interactions among Streptomycetes from prairie soil. Appl Environ Microbiol (2004) 1.10

Cloning and characterization of red clover polyphenol oxidase cDNAs and expression of active protein in Escherichia coli and transgenic alfalfa. Plant Physiol (2004) 1.07

A transient decrease in reactive oxygen species in roots leads to root hair deformation in the legume-rhizobia symbiosis. New Phytol (2007) 1.06

Modifying crops to increase cell wall digestibility. Plant Sci (2011) 0.99

Insights into symbiotic nitrogen fixation in Medicago truncatula. Mol Plant Microbe Interact (2006) 0.96

Biodegradation of atrazine in transgenic plants expressing a modified bacterial atrazine chlorohydrolase (atzA) gene. Plant Biotechnol J (2005) 0.95

Physiological and molecular characterization of aluminum resistance in Medicago truncatula. BMC Plant Biol (2008) 0.95

Recruitment of novel calcium-binding proteins for root nodule symbiosis in Medicago truncatula. Plant Physiol (2006) 0.95

The mitochondrial genome of the wood-degrading basidiomycete Trametes cingulata. FEMS Microbiol Lett (2010) 0.92

Regulatory patterns of a large family of defensin-like genes expressed in nodules of Medicago truncatula. PLoS One (2013) 0.90

Spatio-temporal expression patterns of Arabidopsis thaliana and Medicago truncatula defensin-like genes. PLoS One (2013) 0.88

A novel real-time polymerase chain reaction method for high throughput quantification of small regulatory RNAs. Plant Biotechnol J (2009) 0.86

RNA decoys: an emerging component of plant regulatory networks? Plant Signal Behav (2012) 0.84

Expression of Oryzacystatin I and II in Alfalfa Increases Resistance to the Root-Lesion Nematode. Phytopathology (2003) 0.84

Expression of coordinately regulated defence response genes and analysis of their role in disease resistance in Medicago truncatula. Mol Plant Pathol (2011) 0.84

Patterns of divergence of a large family of nodule cysteine-rich peptides in accessions of Medicago truncatula. Plant J (2014) 0.83

Rapid and specific method for evaluating Streptomyces competitive dynamics in complex soil communities. Appl Environ Microbiol (2010) 0.82

Knockdown of CELL DIVISION CYCLE16 reveals an inverse relationship between lateral root and nodule numbers and a link to auxin in Medicago truncatula. Plant Physiol (2009) 0.81

Molecular and cytological responses of Medicago truncatula to Erysiphe pisi. Mol Plant Pathol (2007) 0.81

Gene silencing in Medicago truncatula roots using RNAi. Methods Mol Biol (2013) 0.78

Genetic dissection of resistance to anthracnose and powdery mildew in Medicago truncatula. Mol Plant Microbe Interact (2008) 0.78

Biodegradation of atrazine by three transgenic grasses and alfalfa expressing a modified bacterial atrazine chlorohydrolase gene. Transgenic Res (2014) 0.76

Complete Genome Sequence of Clavibacter michiganensis subsp. insidiosus R1-1 Using PacBio Single-Molecule Real-Time Technology. Genome Announc (2015) 0.76

Legume focus: model species sequenced, mutagenesis approaches extended, and debut of a new model. Plant Physiol (2009) 0.75

Amycolatopsis minnesotensis sp. nov., isolated from a prairie soil. Int J Syst Evol Microbiol (2006) 0.75