Published in J Mol Biol on March 04, 2008
The DNA-packaging nanomotor of tailed bacteriophages. Nat Rev Microbiol (2011) 2.04
Genome sequences of two novel phages infecting marine roseobacters. Environ Microbiol (2009) 1.43
Complete genome sequence of Roseophage vB_DshP-R1, which infects Dinoroseobacter shibae DFL12. Stand Genomic Sci (2015) 1.40
Structural basis for DNA-hairpin promoter recognition by the bacteriophage N4 virion RNA polymerase. Mol Cell (2008) 1.31
Molecular and physiological analysis of three Pseudomonas aeruginosa phages belonging to the "N4-like viruses". Virology (2010) 1.30
Visualization of uncorrelated, tandem symmetry mismatches in the internal genome packaging apparatus of bacteriophage T7. Proc Natl Acad Sci U S A (2013) 1.19
Genome packaging in viruses. Curr Opin Struct Biol (2010) 1.09
Popping the cork: mechanisms of phage genome ejection. Nat Rev Microbiol (2013) 1.08
Bacteriophage assembly. Viruses (2011) 1.07
Structural characterization of the bacteriophage T7 tail machinery. J Biol Chem (2013) 0.95
Probing, by self-assembly, the number of potential binding sites for minor protein subunits in the procapsid of double-stranded RNA bacteriophage Φ6. J Virol (2012) 0.94
Sequence and structural characterization of great salt lake bacteriophage CW02, a member of the T7-like supergroup. J Virol (2012) 0.93
Condensed genome structure. Adv Exp Med Biol (2012) 0.83
Comparative genomics defines the core genome of the growing N4-like phage genus and identifies N4-like Roseophage specific genes. Front Microbiol (2014) 0.83
Structure of bacteriophage phi29 head fibers has a supercoiled triple repeating helix-turn-helix motif. Proc Natl Acad Sci U S A (2011) 0.82
The complete genome sequence of EC1-UPM, a novel N4-like bacteriophage that infects Escherichia coli O78:K80. Virol J (2013) 0.81
Complete genome sequence of Roseophage vB_DshP-R1, which infects Dinoroseobacter shibae DFL12. Stand Genomic Sci (2015) 0.80
The mechanism of DNA ejection in the Bacillus anthracis spore-binding phage 8a revealed by cryo-electron tomography. Virology (2011) 0.80
Structural investigations of a Podoviridae streptococcus phage C1, implications for the mechanism of viral entry. Proc Natl Acad Sci U S A (2012) 0.80
Three-dimensional asymmetric reconstruction of tailed bacteriophage. Methods Enzymol (2010) 0.79
The tail sheath of bacteriophage N4 interacts with the Escherichia coli receptor. J Bacteriol (2008) 0.79
Identification of structural and morphogenesis genes of Pseudoalteromonas phage φRIO-1 and placement within the evolutionary history of Podoviridae. Virology (2015) 0.79
Structural and biochemical investigation of bacteriophage N4-encoded RNA polymerases. Biomolecules (2015) 0.78
Identification of bacteriophage N4 virion RNA polymerase-nucleic acid interactions in transcription complexes. J Biol Chem (2008) 0.77
Novel group of podovirus infecting the marine bacterium Alteromonas macleodii. Bacteriophage (2013) 0.76
Complete Genome of Acinetobacter baumannii N4-Like Podophage Presley. Genome Announc (2013) 0.76
Complete Genome Sequence of Enterotoxigenic Escherichia coli N4-Like Podophage Pollock. Genome Announc (2015) 0.75
Polyvalent proteins: A pervasive theme in the inter-genomic biological conflicts of bacteriophages and conjugative elements. J Bacteriol (2017) 0.75
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31
Protein secondary structure prediction based on position-specific scoring matrices. J Mol Biol (1999) 33.07
EMAN: semiautomated software for high-resolution single-particle reconstructions. J Struct Biol (1999) 27.52
Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements. Nucleic Acids Res (2001) 22.33
InterProScan: protein domains identifier. Nucleic Acids Res (2005) 18.82
Bacteriophage T7. Science (1972) 13.19
Structure of the bacteriophage phi29 DNA packaging motor. Nature (2000) 5.25
Topologically linked protein rings in the bacteriophage HK97 capsid. Science (2000) 5.15
DNA arrangement in isometric phage heads. Nature (1977) 3.98
DNA packaging by the double-stranded DNA bacteriophages. Cell (1980) 3.92
Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus. Nature (2006) 3.73
The structure of an infectious P22 virion shows the signal for headful DNA packaging. Science (2006) 3.33
Structure of the cell-puncturing device of bacteriophage T4. Nature (2002) 3.32
Three-dimensional rearrangement of proteins in the tail of bacteriophage T4 on infection of its host. Cell (2004) 3.31
Conservation of the capsid structure in tailed dsDNA bacteriophages: the pseudoatomic structure of phi29. Mol Cell (2005) 2.80
Coat protein fold and maturation transition of bacteriophage P22 seen at subnanometer resolutions. Nat Struct Biol (2003) 2.76
Structural framework for DNA translocation via the viral portal protein. EMBO J (2007) 2.58
Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry. Proc Natl Acad Sci U S A (2005) 2.53
No syringes please, ejection of phage T7 DNA from the virion is enzyme driven. Mol Microbiol (2001) 2.36
Molecular architecture of the prolate head of bacteriophage T4. Proc Natl Acad Sci U S A (2004) 2.24
Rapid protein domain assignment from amino acid sequence using predicted secondary structure. Protein Sci (2002) 2.20
Structure of a viral DNA gatekeeper at 10 A resolution by cryo-electron microscopy. EMBO J (2003) 2.16
Cryoelectron microscopy of lambda phage DNA condensates in vitreous ice: the fine structure of DNA toroids. Proc Natl Acad Sci U S A (2001) 2.13
Ig-like domains on bacteriophages: a tale of promiscuity and deceit. J Mol Biol (2006) 1.99
Structural changes of bacteriophage phi29 upon DNA packaging and release. EMBO J (2006) 1.90
Maturation of phage T7 involves structural modification of both shell and inner core components. EMBO J (2005) 1.89
Lactococcal bacteriophage p2 receptor-binding protein structure suggests a common ancestor gene with bacterial and mammalian viruses. Nat Struct Mol Biol (2005) 1.84
The bacteriophage T4 DNA injection machine. Curr Opin Struct Biol (2004) 1.72
Structure of bacteriophage T4 fibritin: a segmented coiled coil and the role of the C-terminal domain. Structure (1997) 1.72
Highly discriminatory binding of capsid-cementing proteins in bacteriophage L. Structure (2006) 1.71
Crystal structure of phage P22 tailspike protein complexed with Salmonella sp. O-antigen receptors. Proc Natl Acad Sci U S A (1996) 1.66
Structure of the connector of bacteriophage T7 at 8A resolution: structural homologies of a basic component of a DNA translocating machinery. J Mol Biol (2005) 1.63
Cryoelectron-microscopy image reconstruction of symmetry mismatches in bacteriophage phi29. J Struct Biol (2001) 1.54
Conformational changes of a viral capsid protein. Thermodynamic rationale for proteolytic regulation of bacteriophage T4 capsid expansion, co-operativity, and super-stabilization by soc binding. J Mol Biol (1992) 1.47
Changes in bacteriophage T7 virion structure at the initiation of infection. Virology (2005) 1.46
Characterization of ion channels involved in the penetration of phage T4 DNA into Escherichia coli cells. J Biol Chem (1988) 1.40
Crystal structure of the polysialic acid-degrading endosialidase of bacteriophage K1F. Nat Struct Mol Biol (2004) 1.36
FhuA-mediated phage genome transfer into liposomes: a cryo-electron tomography study. Curr Biol (2001) 1.33
The phage N4 virion RNA polymerase catalytic domain is related to single-subunit RNA polymerases. EMBO J (2002) 1.26
Virion-associated RNA polymerase required for bacteriophage N4 development. Proc Natl Acad Sci U S A (1977) 1.26
Outer surface protein of bacteriophage lambda. J Mol Biol (1980) 1.25
Main features on tailed phage, host recognition and DNA uptake. Front Biosci (2004) 1.21
Biophysical properties of N4 coliphage. Biochim Biophys Acta (1966) 1.19
Activity of foreign proteins targeted within the bacteriophage T4 head and prohead: implications for packaged DNA structure. J Mol Biol (1998) 1.17
DNA-dependent RNA polymerase from bacteriophage N4 virions. Purification and characterization. J Biol Chem (1980) 1.16
Novel transcribing activities in N4-infected Escherichia coli. Virology (1974) 1.12
Purification and characterization of coliphage N4 RNA polymerase II activity from infected cell extracts. J Biol Chem (1983) 1.03
Nucleotide sequence of the head assembly gene cluster of bacteriophage L and decoration protein characterization. J Bacteriol (2005) 1.00
N4 RNA polymerase II, a heterodimeric RNA polymerase with homology to the single-subunit family of RNA polymerases. J Bacteriol (2002) 0.99
Genetic analysis of bacteriophage N4 adsorption. J Bacteriol (1989) 0.96
Fold recognition and accurate sequence-structure alignment of sequences directing beta-sheet proteins. Proteins (2006) 0.95
Involvement of phage T5 tail proteins and contact sites between the outer and inner membrane of Escherichia coli in phage T5 DNA injection. J Biol Chem (1992) 0.92
Phage N4 RNA polymerase II recruitment to DNA by a single-stranded DNA-binding protein. Genes Dev (2003) 0.88
Structure of dengue virus: implications for flavivirus organization, maturation, and fusion. Cell (2002) 9.13
A structural perspective of the flavivirus life cycle. Nat Rev Microbiol (2005) 5.02
Outcome of the first electron microscopy validation task force meeting. Structure (2012) 4.35
Visualization of membrane protein domains by cryo-electron microscopy of dengue virus. Nat Struct Biol (2003) 4.11
Structure of the immature dengue virus at low pH primes proteolytic maturation. Science (2008) 3.86
Conformational changes of the flavivirus E glycoprotein. Structure (2004) 3.66
Structures of immature flavivirus particles. EMBO J (2003) 3.62
Structure of West Nile virus. Science (2003) 3.48
Structure of the cell-puncturing device of bacteriophage T4. Nature (2002) 3.32
Three-dimensional rearrangement of proteins in the tail of bacteriophage T4 on infection of its host. Cell (2004) 3.31
Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins. Nat Struct Mol Biol (2008) 3.27
The flavivirus precursor membrane-envelope protein complex: structure and maturation. Science (2008) 3.26
The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces. Cell (2008) 3.07
The structure and evolution of the major capsid protein of a large, lipid-containing DNA virus. Proc Natl Acad Sci U S A (2002) 3.07
The tail structure of bacteriophage T4 and its mechanism of contraction. Nat Struct Mol Biol (2005) 2.82
Placement of the structural proteins in Sindbis virus. J Virol (2002) 2.81
Conservation of the capsid structure in tailed dsDNA bacteriophages: the pseudoatomic structure of phi29. Mol Cell (2005) 2.80
A virus-like particle vaccine for epidemic Chikungunya virus protects nonhuman primates against infection. Nat Med (2010) 2.62
Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry. Proc Natl Acad Sci U S A (2005) 2.53
Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms. Proc Natl Acad Sci U S A (2009) 2.52
Structural changes of envelope proteins during alphavirus fusion. Nature (2010) 2.32
Outcome of a workshop on archiving structural models of biological macromolecules. Structure (2006) 2.32
Molecular architecture of the prolate head of bacteriophage T4. Proc Natl Acad Sci U S A (2004) 2.24
An open letter to Elias Zerhouni. Science (2005) 2.19
Cryo-EM reconstruction of dengue virus in complex with the carbohydrate recognition domain of DC-SIGN. Cell (2006) 2.08
Three-dimensional structure of bacteriophage T4 baseplate. Nat Struct Biol (2003) 2.05
The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation. Proc Natl Acad Sci U S A (2004) 2.05
Structural changes of bacteriophage phi29 upon DNA packaging and release. EMBO J (2006) 1.90
Structural studies of the giant mimivirus. PLoS Biol (2009) 1.88
Morphogenesis of the T4 tail and tail fibers. Virol J (2010) 1.86
Structural basis for the preferential recognition of immature flaviviruses by a fusion-loop antibody. EMBO J (2009) 1.85
West Nile virus in complex with the Fab fragment of a neutralizing monoclonal antibody. Proc Natl Acad Sci U S A (2006) 1.83
The crystal structure of coxsackievirus A21 and its interaction with ICAM-1. Structure (2005) 1.82
Crystal structure of human enterovirus 71. Science (2012) 1.79
The structure of the ATPase that powers DNA packaging into bacteriophage T4 procapsids. Mol Cell (2007) 1.79
Structure of immature West Nile virus. J Virol (2007) 1.77
Dengue structure differs at the temperatures of its human and mosquito hosts. Proc Natl Acad Sci U S A (2013) 1.75
Bacteriophage phi29 scaffolding protein gp7 before and after prohead assembly. Nat Struct Biol (2003) 1.74
Mapping the structure and function of the E1 and E2 glycoproteins in alphaviruses. Structure (2006) 1.68
Interpretation of electron density with stereographic roadmap projections. J Struct Biol (2006) 1.64
Cryo-electron microscopy of the giant Mimivirus. J Mol Biol (2005) 1.61
Neutralization of West Nile virus by cross-linking of its surface proteins with Fab fragments of the human monoclonal antibody CR4354. Proc Natl Acad Sci U S A (2010) 1.57
Mimivirus shows dramatic genome reduction after intraamoebal culture. Proc Natl Acad Sci U S A (2011) 1.54
The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria. EMBO J (2009) 1.51
Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses. Proc Natl Acad Sci U S A (2008) 1.51
Project TENDR: Targeting Environmental Neuro-Developmental Risks The TENDR Consensus Statement. Environ Health Perspect (2016) 1.50
Structure of adeno-associated virus serotype 5. J Virol (2004) 1.50
The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities. J Mol Biol (2007) 1.48
Defining molecular and domain boundaries in the bacteriophage phi29 DNA packaging motor. Structure (2008) 1.47
The structure of porcine parvovirus: comparison with related viruses. J Mol Biol (2002) 1.46
Structure of Sputnik, a virophage, at 3.5-Å resolution. Proc Natl Acad Sci U S A (2012) 1.45
Heparin binding induces conformational changes in Adeno-associated virus serotype 2. J Struct Biol (2008) 1.44
Influence of pr-M cleavage on the heterogeneity of extracellular dengue virus particles. J Virol (2010) 1.41
Related giant viruses in distant locations and different habitats: Acanthamoeba polyphaga moumouvirus represents a third lineage of the Mimiviridae that is close to the megavirus lineage. Genome Biol Evol (2012) 1.40
The functional domains of bacteriophage t4 terminase. J Biol Chem (2004) 1.37
An icosahedral algal virus has a complex unique vertex decorated by a spike. Proc Natl Acad Sci U S A (2009) 1.35
Nanoparticle-templated assembly of viral protein cages. Nano Lett (2006) 1.33
Complexes of poliovirus serotypes with their common cellular receptor, CD155. J Virol (2003) 1.31
Structural basis for DNA-hairpin promoter recognition by the bacteriophage N4 virion RNA polymerase. Mol Cell (2008) 1.31
Maturation of flaviviruses starts from one or more icosahedrally independent nucleation centres. EMBO Rep (2011) 1.31
The structure of human parvovirus B19. Proc Natl Acad Sci U S A (2004) 1.30
Asymmetric binding of transferrin receptor to parvovirus capsids. Proc Natl Acad Sci U S A (2007) 1.30
Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages. Proc Natl Acad Sci U S A (2011) 1.28
Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike. Mol Cell (2009) 1.24
Capturing a flavivirus pre-fusion intermediate. PLoS Pathog (2009) 1.24
Three-dimensional structure and function of the Paramecium bursaria chlorella virus capsid. Proc Natl Acad Sci U S A (2011) 1.17
Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds. J Virol (2004) 1.17
Structure of decay-accelerating factor bound to echovirus 7: a virus-receptor complex. Proc Natl Acad Sci U S A (2002) 1.17
Structural studies of the Sputnik virophage. J Virol (2009) 1.17
Cryo-EM study of the Pseudomonas bacteriophage phiKZ. Structure (2007) 1.17
Dimeric rous sarcoma virus capsid protein structure relevant to immature Gag assembly. J Mol Biol (2004) 1.17
Molecular dissection of ø29 scaffolding protein function in an in vitro assembly system. J Mol Biol (2006) 1.14
Structure of the small outer capsid protein, Soc: a clamp for stabilizing capsids of T4-like phages. J Mol Biol (2009) 1.14
Conformational switching by the scaffolding protein D directs the assembly of bacteriophage phiX174. Mol Cell (2004) 1.12
A three-dimensional cryo-electron microscopy structure of the bacteriophage phiKZ head. J Mol Biol (2005) 1.10
Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization. Elife (2013) 1.10
Structure of the three N-terminal immunoglobulin domains of the highly immunogenic outer capsid protein from a T4-like bacteriophage. J Virol (2011) 1.10
Structural analyses of Phycodnaviridae and Iridoviridae. Acta Crystallogr D Biol Crystallogr (2003) 1.09
Genome packaging in viruses. Curr Opin Struct Biol (2010) 1.09
The headful packaging nuclease of bacteriophage T4. Mol Microbiol (2008) 1.08
Structural comparison of different antibodies interacting with parvovirus capsids. J Virol (2009) 1.08
The capsid proteins of a large, icosahedral dsDNA virus. J Mol Biol (2008) 1.07
Bacteriophage assembly. Viruses (2011) 1.07
Structural studies of bacteriophage alpha3 assembly. J Mol Biol (2003) 1.06
In vitro-assembled alphavirus core-like particles maintain a structure similar to that of nucleocapsid cores in mature virus. J Virol (2002) 1.06
Structural studies of Hantaan virus. J Virol (2010) 1.05
Interaction of decay-accelerating factor with coxsackievirus B3. J Virol (2007) 1.04
The coiled-coil domain structure of the Sin Nombre virus nucleocapsid protein. J Mol Biol (2006) 1.04