Published in Nat Rev Microbiol on May 13, 2008
Microbial community structure and its functional implications. Nature (2009) 4.23
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Proteorhodopsin phototrophy promotes survival of marine bacteria during starvation. PLoS Biol (2010) 1.77
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Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability. Proc Natl Acad Sci U S A (2012) 1.68
Energy starved Candidatus Pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration. PLoS One (2011) 1.62
Crystallographic structure of xanthorhodopsin, the light-driven proton pump with a dual chromophore. Proc Natl Acad Sci U S A (2008) 1.45
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Spliced leader-based metatranscriptomic analyses lead to recognition of hidden genomic features in dinoflagellates. Proc Natl Acad Sci U S A (2010) 1.35
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Genomic makeup of the marine flavobacterium Nonlabens (Donghaeana) dokdonensis and identification of a novel class of rhodopsins. Genome Biol Evol (2013) 1.18
Functional characterization of flavobacteria rhodopsins reveals a unique class of light-driven chloride pump in bacteria. Proc Natl Acad Sci U S A (2014) 1.16
Photoheterotrophic microbes in the Arctic Ocean in summer and winter. Appl Environ Microbiol (2009) 1.15
Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsin-producing microbial community in the North Sea. Appl Environ Microbiol (2010) 1.14
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Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria. Sci Rep (2013) 1.13
Proteorhodopsin-bearing bacteria in Antarctic sea ice. Appl Environ Microbiol (2010) 1.13
Domain coupling in GPCRs: the engine for induced conformational changes. Trends Pharmacol Sci (2011) 1.12
Away from darkness: a review on the effects of solar radiation on heterotrophic bacterioplankton activity. Front Microbiol (2013) 1.10
Poles apart: Arctic and Antarctic Octadecabacter strains share high genome plasticity and a new type of xanthorhodopsin. PLoS One (2013) 1.08
Comparable light stimulation of organic nutrient uptake by SAR11 and Prochlorococcus in the North Atlantic subtropical gyre. ISME J (2012) 1.02
Cultivation and genomic, nutritional, and lipid biomarker characterization of Roseiflexus strains closely related to predominant in situ populations inhabiting Yellowstone hot spring microbial mats. J Bacteriol (2010) 1.02
Reconstitution of Gloeobacter violaceus rhodopsin with a light-harvesting carotenoid antenna. Biochemistry (2009) 0.98
Global abundance of microbial rhodopsins. ISME J (2012) 0.98
Co-occurrence patterns for abundant marine archaeal and bacterial lineages in the deep chlorophyll maximum of coastal California. ISME J (2011) 0.98
Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. strain MED134. Appl Environ Microbiol (2011) 0.98
Metagenomic insights into strategies of carbon conservation and unusual sulfur biogeochemistry in a hypersaline Antarctic lake. ISME J (2013) 0.98
Phylogenetic and evolutionary patterns in microbial carotenoid biosynthesis are revealed by comparative genomics. PLoS One (2010) 0.96
Light-stimulated growth of proteorhodopsin-bearing sea-ice psychrophile Psychroflexus torquis is salinity dependent. ISME J (2013) 0.95
Femtosecond carotenoid to retinal energy transfer in xanthorhodopsin. Biophys J (2009) 0.95
Genomic and phenotypic attributes of novel salinivibrios from stromatolites, sediment and water from a high altitude lake. BMC Genomics (2014) 0.94
A novel fungal family of oligopeptide transporters identified by functional metatranscriptomics of soil eukaryotes. ISME J (2011) 0.94
Enhancement of survival and electricity production in an engineered bacterium by light-driven proton pumping. Appl Environ Microbiol (2010) 0.93
A microbial rhodopsin with a unique retinal composition shows both sensory rhodopsin II and bacteriorhodopsin-like properties. J Biol Chem (2010) 0.91
Function and regulation of Vibrio campbellii proteorhodopsin: acquired phototrophy in a classical organoheterotroph. PLoS One (2012) 0.90
Metagenomics and its connection to microbial community organization. F1000 Biol Rep (2012) 0.88
Genetic diversity and abundance of flavobacterial proteorhodopsin in China seas. Appl Environ Microbiol (2008) 0.88
A new class of marine Euryarchaeota group II from the Mediterranean deep chlorophyll maximum. ISME J (2014) 0.88
Reconstitution of gloeobacter rhodopsin with echinenone: role of the 4-keto group. Biochemistry (2010) 0.87
Ultrasensitive measurements of microbial rhodopsin photocycles using photochromic FRET. Photochem Photobiol (2011) 0.87
Proteorhodopsin genes in giant viruses. Biol Direct (2012) 0.87
An empirical test of convergent evolution in rhodopsins. Mol Biol Evol (2013) 0.86
Light-promoted rhodopsin expression and starvation survival in the marine dinoflagellate Oxyrrhis marina. PLoS One (2014) 0.86
Integration of molecular functions at the ecosystemic level: breakthroughs and future goals of environmental genomics and post-genomics. Ecol Lett (2010) 0.86
Proteorhodopsin light-enhanced growth linked to vitamin-B1 acquisition in marine Flavobacteria. ISME J (2015) 0.86
Marine Bacterial and Archaeal Ion-Pumping Rhodopsins: Genetic Diversity, Physiology, and Ecology. Microbiol Mol Biol Rev (2016) 0.84
Nature's toolkit for microbial rhodopsin ion pumps. Proc Natl Acad Sci U S A (2014) 0.84
Genome sequence of the Roseovarius mucosus type strain (DSM 17069(T)), a bacteriochlorophyll a-containing representative of the marine Roseobacter group isolated from the dinoflagellate Alexandrium ostenfeldii. Stand Genomic Sci (2015) 0.83
Niche differentiation of bacterial communities at a millimeter scale in Shark Bay microbial mats. Sci Rep (2015) 0.81
Diversity and functional analysis of light-driven pumping rhodopsins in marine Flavobacteria. Microbiologyopen (2015) 0.80
Characterization of an Unconventional Rhodopsin from the Freshwater Actinobacterium Rhodoluna lacicola. J Bacteriol (2015) 0.80
Ecological Genomics of the Uncultivated Marine Roseobacter Lineage CHAB-I-5. Appl Environ Microbiol (2016) 0.80
Winter diversity and expression of proteorhodopsin genes in a polar ocean. ISME J (2015) 0.80
Rhodopsin gene expression regulated by the light dark cycle, light spectrum and light intensity in the dinoflagellate Prorocentrum. Front Microbiol (2015) 0.80
The EF loop in green proteorhodopsin affects conformation and photocycle dynamics. Biophys J (2013) 0.79
Bacterial Active Community Cycling in Response to Solar Radiation and Their Influence on Nutrient Changes in a High-Altitude Wetland. Front Microbiol (2016) 0.78
Recent advances and future perspectives in microbial phototrophy in antarctic sea ice. Biology (Basel) (2012) 0.78
Proteorhodopsin-like genes present in thermoacidophilic high-mountain microbial communities. Appl Environ Microbiol (2012) 0.78
Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)). Stand Genomic Sci (2012) 0.78
MicRhoDE: a curated database for the analysis of microbial rhodopsin diversity and evolution. Database (Oxford) (2015) 0.78
Draft Genome Sequence of the Gammaproteobacterial Strain MOLA455, a Representative of a Ubiquitous Proteorhodopsin-Producing Group in the Ocean. Genome Announc (2014) 0.77
Marine diatom proteorhodopsins and their potential role in coping with low iron availability. ISME J (2015) 0.76
Genome reconstructions indicate the partitioning of ecological functions inside a phytoplankton bloom in the Amundsen Sea, Antarctica. Front Microbiol (2015) 0.76
Complete Genome Sequence of the Proteorhodopsin-Containing Marine Bacterium Sediminicola sp. YIK13. Genome Announc (2016) 0.75
New insights into marine group III Euryarchaeota, from dark to light. ISME J (2017) 0.75
Summer Abundance and Distribution of Proteorhodopsin Genes in the Western Arctic Ocean. Front Microbiol (2016) 0.75
Light-driven increase in carbon yield is linked to maintenance in the proteorhodopsin-containing Photobacterium angustum S14. Front Microbiol (2015) 0.75
Genome sequence of strain IMCC2047, a novel marine member of the Gammaproteobacteria. J Bacteriol (2011) 0.75
Genome sequence of strain IMCC14465, isolated from the East Sea, belonging to the PS1 clade of Alphaproteobacteria. J Bacteriol (2012) 0.75
Genome Sequence of Strain MOLA814, a Proteorhodopsin-Containing Representative of the Betaproteobacteria Common in the Ocean. Genome Announc (2013) 0.75
Complete Genome Sequence of the Proteorhodopsin-Containing Marine Flavobacterium Dokdonia donghaensis DSW-1T, Isolated from Seawater off Dokdo in the East Sea (Sea of Korea). Genome Announc (2016) 0.75
In situ light responses of the proteorhodopsin-bearing Antarctic sea-ice bacterium, Psychroflexus torques. ISME J (2017) 0.75
Neutral Evolution and Dispersal Limitation Produce Biogeographic Patterns in Microcystis aeruginosa Populations of Lake Systems. Microb Ecol (2017) 0.75
Exploring Microdiversity in Novel Kordia sp. (Bacteroidetes) with Proteorhodopsin from the Tropical Indian Ocean via Single Amplified Genomes. Front Microbiol (2017) 0.75
Predicting Species-Resolved Macronutrient Acquisition during Succession in a Model Phototrophic Biofilm Using an Integrated 'Omics Approach. Front Microbiol (2017) 0.75
Annually reoccurring bacterial communities are predictable from ocean conditions. Proc Natl Acad Sci U S A (2006) 4.24
A latitudinal diversity gradient in planktonic marine bacteria. Proc Natl Acad Sci U S A (2008) 4.00
Molecular diversity and ecology of microbial plankton. Nature (2005) 2.81
Coupling 16S-ITS rDNA clone libraries and automated ribosomal intergenic spacer analysis to show marine microbial diversity: development and application to a time series. Environ Microbiol (2005) 2.80
SAR11 marine bacteria require exogenous reduced sulphur for growth. Nature (2008) 2.50
Marine bacterial, archaeal and protistan association networks reveal ecological linkages. ISME J (2011) 2.40
Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors. Bioinformatics (2006) 2.15
The small genome of an abundant coastal ocean methylotroph. Environ Microbiol (2008) 2.05
Abundant SAR11 viruses in the ocean. Nature (2013) 2.05
Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I. Nat Protoc (2007) 2.03
Novel lineages of Planctomycetes densely colonize the alkaline gut of soil-feeding termites (Cubitermes spp.). Environ Microbiol (2008) 1.76
Energy starved Candidatus Pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration. PLoS One (2011) 1.62
Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11. Environ Microbiol (2009) 1.61
The importance of culturing bacterioplankton in the 'omics' age. Nat Rev Microbiol (2007) 1.53
Niche heterogeneity determines bacterial community structure in the termite gut (Reticulitermes santonensis). Environ Microbiol (2005) 1.37
INDIGO - INtegrated data warehouse of microbial genomes with examples from the red sea extremophiles. PLoS One (2013) 1.36
Microbiology of the Red Sea (and other) deep-sea anoxic brine lakes. Environ Microbiol Rep (2011) 1.31
Polyphyletic photosynthetic reaction centre genes in oligotrophic marine Gammaproteobacteria. Environ Microbiol (2007) 1.30
Structure and topology of microbial communities in the major gut compartments of Melolontha melolontha larvae (Coleoptera: Scarabaeidae). Appl Environ Microbiol (2005) 1.25
Physicochemical conditions and microbial activities in the highly alkaline gut of the humus-feeding larva of Pachnoda ephippiata (Coleoptera: Scarabaeidae). Appl Environ Microbiol (2003) 1.22
Identification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique'. BMC Genomics (2009) 1.21
Phylogenetic diversity of 'Endomicrobia' and their specific affiliation with termite gut flagellates. Microbiology (2007) 1.11
Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea. Mol Ecol (2011) 1.07
' Candidatus Hepatincola porcellionum' gen. nov., sp. nov., a new, stalk-forming lineage of Rickettsiales colonizing the midgut glands of a terrestrial isopod. Arch Microbiol (2004) 1.07
"Candidatus hepatoplasma crinochetorum," a new, stalk-forming lineage of Mollicutes colonizing the midgut glands of a terrestrial isopod. Appl Environ Microbiol (2004) 1.01
The phylogeny of endolithic microbes associated with marine basalts. Environ Microbiol (2007) 0.97
Prokaryotic symbionts of termite gut flagellates: phylogenetic and metabolic implications of a tripartite symbiosis. Prog Mol Subcell Biol (2006) 0.96
Transcriptional and translational regulatory responses to iron limitation in the globally distributed marine bacterium Candidatus pelagibacter ubique. PLoS One (2010) 0.96
Patterns of ecological specialization among microbial populations in the Red Sea and diverse oligotrophic marine environments. Ecol Evol (2013) 0.96
Dominant sugar utilizers in sediment of Lake Constance depend on syntrophic cooperation with methanogenic partner organisms. Environ Microbiol (2008) 0.93
Genome sequence of Haloplasma contractile, an unusual contractile bacterium from a deep-sea anoxic brine lake. J Bacteriol (2011) 0.89
Diet strongly influences the gut microbiota of surgeonfishes. Mol Ecol (2015) 0.88
Combined analyses of the ITS loci and the corresponding 16S rRNA genes reveal high micro- and macrodiversity of SAR11 populations in the Red Sea. PLoS One (2012) 0.87
A dynamic programming algorithm for binning microbial community profiles. Bioinformatics (2006) 0.87
Gene clusters involved in isethionate degradation by terrestrial and marine bacteria. Appl Environ Microbiol (2009) 0.83
Genome sequence of the novel marine member of the Gammaproteobacteria strain HTCC5015. J Bacteriol (2010) 0.83
Genome Sequence of Pseudomonas sp. Strain Chol1, a Model Organism for the Degradation of Bile Salts and Other Steroid Compounds. Genome Announc (2013) 0.81
Genome sequence of Halorhabdus tiamatea, the first archaeon isolated from a deep-sea anoxic brine lake. J Bacteriol (2011) 0.81
Cytotoxic and apoptotic evaluations of marine bacteria isolated from brine-seawater interface of the Red Sea. BMC Complement Altern Med (2013) 0.80
Genome sequence of Salinisphaera shabanensis, a gammaproteobacterium from the harsh, variable environment of the brine-seawater interface of the Shaban Deep in the Red Sea. J Bacteriol (2011) 0.79
Induction of apoptosis in cancer cell lines by the Red Sea brine pool bacterial extracts. BMC Complement Altern Med (2013) 0.78
Genomic differentiation among two strains of the PS1 clade isolated from geographically separated marine habitats. FEMS Microbiol Ecol (2014) 0.78
Humic substance-mediated Fe(III) reduction by a fermenting Bacillus strain from the alkaline gut of a humus-feeding scarab beetle larva. Syst Appl Microbiol (2012) 0.76
Distribution and diversity of Prochlorococcus ecotypes in the Red Sea. FEMS Microbiol Lett (2014) 0.76
Diversity of picoeukaryotes at an oligotrophic site off the Northeastern Red Sea Coast. Aquat Biosyst (2013) 0.76