Published in Mol Cell Proteomics on May 18, 2008
Unbiased quantitation of Escherichia coli membrane proteome using phase transfer surfactants. Mol Cell Proteomics (2009) 1.30
Plasma membrane proteomics and its application in clinical cancer biomarker discovery. Mol Cell Proteomics (2010) 1.27
Protein analysis of purified respiratory syncytial virus particles reveals an important role for heat shock protein 90 in virus particle assembly. Mol Cell Proteomics (2010) 1.27
Mass spectrometry accelerates membrane protein analysis. Trends Biochem Sci (2011) 1.24
Identification of downstream components of ubiquitin-conjugating enzyme PHOSPHATE2 by quantitative membrane proteomics in Arabidopsis roots. Plant Cell (2013) 1.19
Type 1 equilibrative nucleoside transporter regulates ethanol drinking through accumbal N-methyl-D-aspartate receptor signaling. Biol Psychiatry (2011) 1.08
Adenosine and glutamate signaling in neuron-glial interactions: implications in alcoholism and sleep disorders. Alcohol Clin Exp Res (2012) 1.07
Temporal stability of the urinary proteome after kidney transplant: more sensitive than protein composition? J Proteome Res (2009) 1.03
Proteomic analysis of lipid raft-enriched membranes isolated from internal organelles. Biochem Biophys Res Commun (2011) 0.96
Multiplex IP-FCM (immunoprecipitation-flow cytometry): Principles and guidelines for assessing physiologic protein-protein interactions in multiprotein complexes. Methods (2011) 0.96
Gel-aided sample preparation (GASP)--a simplified method for gel-assisted proteomic sample generation from protein extracts and intact cells. Proteomics (2015) 0.95
An informatics-assisted label-free approach for personalized tissue membrane proteomics: case study on colorectal cancer. Mol Cell Proteomics (2011) 0.94
Interplay between SIN3A and STAT3 mediates chromatin conformational changes and GFAP expression during cellular differentiation. PLoS One (2011) 0.94
In-depth identification of pathways related to cisplatin-induced hepatotoxicity through an integrative method based on an informatics-assisted label-free protein quantitation and microarray gene expression approach. Mol Cell Proteomics (2011) 0.90
Organelle membrane proteomics reveals differential influence of mycobacterial lipoglycans on macrophage phagosome maturation and autophagosome accumulation. J Proteome Res (2010) 0.88
MicroRNA-122 influences the development of sperm abnormalities from human induced pluripotent stem cells by regulating TNP2 expression. Stem Cells Dev (2013) 0.88
Quantitative phosphoproteomic study of pressure-overloaded mouse heart reveals dynamin-related protein 1 as a modulator of cardiac hypertrophy. Mol Cell Proteomics (2013) 0.85
Phosphoproteomics characterization of novel phosphorylated sites of lens proteins from normal and cataractous human eye lenses. Mol Vis (2011) 0.84
Proteomics and opportunities for clinical translation in urological disease. J Urol (2009) 0.84
Application of proteomic analysis to the study of renal diseases. Nat Rev Nephrol (2009) 0.82
Global analysis of cdc14 dephosphorylation sites reveals essential regulatory role in mitosis and cytokinesis. Mol Cell Proteomics (2013) 0.81
Identification of in vivo phosphorylation sites of lens proteins from porcine eye lenses by a gel-free phosphoproteomics approach. Mol Vis (2010) 0.80
Mitochondrial translocation of EGFR regulates mitochondria dynamics and promotes metastasis in NSCLC. Oncotarget (2015) 0.80
Complementary quantitative proteomics reveals that transcription factor AP-4 mediates E-box-dependent complex formation for transcriptional repression of HDM2. Mol Cell Proteomics (2009) 0.79
Integrating transcriptomics and proteomics to show that tanshinone IIA suppresses cell growth by blocking glucose metabolism in gastric cancer cells. BMC Genomics (2015) 0.79
Quantitative proteomic analysis of human lung tumor xenografts treated with the ectopic ATP synthase inhibitor citreoviridin. PLoS One (2013) 0.79
Mass spectrometry-based analysis of rat liver and hepatocellular carcinoma Morris hepatoma 7777 plasma membrane proteome. Anal Chem (2013) 0.79
Correlation analysis of proteins responsive to Zn, Mn, or Fe deficiency in Arabidopsis roots based on iTRAQ analysis. Plant Cell Rep (2014) 0.78
Thematic review series: proteomics. Proteomic analysis of lipid-protein complexes. J Lipid Res (2009) 0.78
Mining Missing Membrane Proteins by High-pH Reverse-Phase StageTip Fractionation and Multiple Reaction Monitoring Mass Spectrometry. J Proteome Res (2015) 0.78
Streamlined Membrane Proteome Preparation for Shotgun Proteomics Analysis with Triton X-100 Cloud Point Extraction and Nanodiamond Solid Phase Extraction. Materials (Basel) (2016) 0.78
Analysis of the immune response of human dendritic cells to Mycobacterium tuberculosis by quantitative proteomics. Proteome Sci (2016) 0.76
Phosphoproteomics Reveals HMGA1, a CK2 Substrate, as a Drug-Resistant Target in Non-Small Cell Lung Cancer. Sci Rep (2017) 0.75
Comparative proteomics analysis of degenerative eye lenses of nocturnal rice eel and catfish as compared to diurnal zebrafish. Mol Vis (2013) 0.75
Interaction of peroxiredoxin V with dihydrolipoamide branched chain transacylase E2 (DBT) in mouse kidney under hypoxia. Proteome Sci (2015) 0.75
Proteomic analysis of AQP11-null kidney: Proximal tubular type polycystic kidney disease. Biochem Biophys Rep (2017) 0.75
Functional recovery of stroke rats induced by granulocyte colony-stimulating factor-stimulated stem cells. Circulation (2004) 2.69
Granulocyte colony-stimulating factor for acute ischemic stroke: a randomized controlled trial. CMAJ (2006) 1.79
DbPTM 3.0: an informative resource for investigating substrate site specificity and functional association of protein post-translational modifications. Nucleic Acids Res (2012) 1.71
Dosimetric evaluations of the interplay effect in respiratory-gated intensity-modulated radiation therapy. Med Phys (2009) 1.66
Isolation and characterization of size-sieved stem cells from human bone marrow. Stem Cells (2002) 1.62
IL-6 expression regulates tumorigenicity and correlates with prognosis in bladder cancer. PLoS One (2013) 1.62
Clinical outcome in posthysterectomy cervical cancer patients treated with concurrent Cisplatin and intensity-modulated pelvic radiotherapy: comparison with conventional radiotherapy. Int J Radiat Oncol Biol Phys (2007) 1.47
Adjuvant concurrent chemoradiotherapy with intensity-modulated pelvic radiotherapy after surgery for high-risk, early stage cervical cancer patients. Cancer J (2008) 1.47
Defining a link with autosomal-dominant polycystic kidney disease in mice with congenitally low expression of Pkd1. Am J Pathol (2006) 1.47
Multi-Q: a fully automated tool for multiplexed protein quantitation. J Proteome Res (2006) 1.38
Multiple therapeutic effects of valproic acid in spinal muscular atrophy model mice. J Mol Med (Berl) (2008) 1.38
Evaluation of serum amyloid A as a biomarker for gastric cancer. Ann Surg Oncol (2006) 1.37
Magnetic nanoparticle labeling of mesenchymal stem cells without transfection agent: cellular behavior and capability of detection with clinical 1.5 T magnetic resonance at the single cell level. Magn Reson Med (2007) 1.34
Intracerebral peripheral blood stem cell (CD34+) implantation induces neuroplasticity by enhancing beta1 integrin-mediated angiogenesis in chronic stroke rats. J Neurosci (2006) 1.34
Stromal cell-derived factor-1 alpha promotes neuroprotection, angiogenesis, and mobilization/homing of bone marrow-derived cells in stroke rats. J Pharmacol Exp Ther (2007) 1.34
The sensitivity of human mesenchymal stem cells to ionizing radiation. Int J Radiat Oncol Biol Phys (2006) 1.29
IDEAL-Q, an automated tool for label-free quantitation analysis using an efficient peptide alignment approach and spectral data validation. Mol Cell Proteomics (2009) 1.28
Enhancement of neuroplasticity through upregulation of beta1-integrin in human umbilical cord-derived stromal cell implanted stroke model. Neurobiol Dis (2007) 1.28
Genetic diversity and C2-like subgenogroup strains of enterovirus 71, Taiwan, 2008. Virol J (2010) 1.26
Overexpression of PrPC by adenovirus-mediated gene targeting reduces ischemic injury in a stroke rat model. J Neurosci (2005) 1.21
Functionalized magnetic nanoparticles for small-molecule isolation, identification, and quantification. Anal Chem (2007) 1.20
Over-expression of EphB3 enhances cell-cell contacts and suppresses tumor growth in HT-29 human colon cancer cells. Carcinogenesis (2009) 1.19
Identification of downstream components of ubiquitin-conjugating enzyme PHOSPHATE2 by quantitative membrane proteomics in Arabidopsis roots. Plant Cell (2013) 1.19
Regular exercise prolongs survival in a type 2 spinal muscular atrophy model mouse. J Neurosci (2005) 1.17
Overexpression of placenta growth factor contributes to the pathogenesis of pulmonary emphysema. Am J Respir Crit Care Med (2003) 1.16
Plasma proteome of severe acute respiratory syndrome analyzed by two-dimensional gel electrophoresis and mass spectrometry. Proc Natl Acad Sci U S A (2004) 1.15
The inhibition of osteogenesis with human bone marrow mesenchymal stem cells by CdSe/ZnS quantum dot labels. Biomaterials (2005) 1.15
Quantitative proteomic and genomic profiling reveals metastasis-related protein expression patterns in gastric cancer cells. J Proteome Res (2006) 1.14
Inhibition of lung tumor growth and augmentation of radiosensitivity by decreasing peroxiredoxin I expression. Int J Radiat Oncol Biol Phys (2006) 1.13
Essential role of nephrocystin in photoreceptor intraflagellar transport in mouse. Hum Mol Genet (2009) 1.12
Significance of interleukin-6 signaling in the resistance of pharyngeal cancer to irradiation and the epidermal growth factor receptor inhibitor. Int J Radiat Oncol Biol Phys (2010) 1.12
Establishing a standardized therapeutic testing protocol for spinal muscular atrophy. Neurobiol Dis (2006) 1.11
Site-specific protein modification through Cu(I)-catalyzed 1,2,3-triazole formation and its implementation in protein microarray fabrication. Angew Chem Int Ed Engl (2006) 1.10
Production of high-quality particulate methane monooxygenase in high yields from Methylococcus capsulatus (bath) with a hollow-fiber membrane bioreactor. J Bacteriol (2003) 1.10
Immobilized metal affinity chromatography revisited: pH/acid control toward high selectivity in phosphoproteomics. J Proteome Res (2008) 1.09
Secretoneurin promotes neuroprotection and neuronal plasticity via the Jak2/Stat3 pathway in murine models of stroke. J Clin Invest (2008) 1.08
dbSNO: a database of cysteine S-nitrosylation. Bioinformatics (2012) 1.07
Exercise-induced activation of NMDA receptor promotes motor unit development and survival in a type 2 spinal muscular atrophy model mouse. J Neurosci (2008) 1.06
Homing genes, cell therapy and stroke. Front Biosci (2006) 1.06
Regenerative therapy for stroke. Cell Transplant (2007) 1.05
A novel NK-type homeobox gene, ENK (early embryo specific NK), preferentially expressed in embryonic stem cells. Gene Expr Patterns (2003) 1.05
SNOSite: exploiting maximal dependence decomposition to identify cysteine S-nitrosylation with substrate site specificity. PLoS One (2011) 1.04
Predictive factors of radiation-induced skin toxicity in breast cancer patients. BMC Cancer (2010) 1.04
Neuregulin-1 reduces ischemia-induced brain damage in rats. Neurobiol Aging (2004) 1.03
Efficient tracking of non-iron-labeled mesenchymal stem cells with serial MRI in chronic stroke rats. Stroke (2006) 1.02
Human mesenchymal stem cells prolong survival and ameliorate motor deficit through trophic support in Huntington's disease mouse models. PLoS One (2011) 1.02
Surface marker epithelial cell adhesion molecule and E-cadherin facilitate the identification and selection of induced pluripotent stem cells. Stem Cell Rev (2011) 1.01
Quantitative analysis of SMN1 and SMN2 genes based on DHPLC: a highly efficient and reliable carrier-screening test. Hum Mutat (2005) 1.01
Comparison of membrane fraction proteomic profiles of normal and cancerous human colorectal tissues with gel-assisted digestion and iTRAQ labeling mass spectrometry. FEBS J (2010) 1.00
IL-6 expression predicts treatment response and outcome in squamous cell carcinoma of the esophagus. Mol Cancer (2013) 1.00
S-alkylating labeling strategy for site-specific identification of the s-nitrosoproteome. J Proteome Res (2010) 1.00
Expression and function role of DNA methyltransferase 1 in human bladder cancer. Cancer (2011) 1.00
Outcome of patients with esophageal cancer: a nationwide analysis. Ann Surg Oncol (2013) 0.99
Implantation of olfactory ensheathing cells promotes neuroplasticity in murine models of stroke. J Clin Invest (2008) 0.99
DDR1 regulates the stabilization of cell surface E-cadherin and E-cadherin-mediated cell aggregation. J Cell Physiol (2010) 0.99
Stathmin, a microtubule-destabilizing protein, is dysregulated in spinal muscular atrophy. Hum Mol Genet (2010) 0.99
Healthy behaviors and onset of functional disability in older adults: results of a national longitudinal study. J Am Geriatr Soc (2011) 0.99
Role of interleukin 1 beta in esophageal squamous cell carcinoma. J Mol Med (Berl) (2011) 0.98
Tumor cells require thymidylate kinase to prevent dUTP incorporation during DNA repair. Cancer Cell (2012) 0.98
Abolishing Bax-dependent apoptosis shows beneficial effects on spinal muscular atrophy model mice. Mol Ther (2006) 0.98
Phosphoproteomics identifies oncogenic Ras signaling targets and their involvement in lung adenocarcinomas. PLoS One (2011) 0.97
Role for alpha-L-fucosidase in the control of Helicobacter pylori-infected gastric cancer cells. Proc Natl Acad Sci U S A (2009) 0.97
Restoring Bcl-x(L) levels benefits a mouse model of spinal muscular atrophy. Neurobiol Dis (2008) 0.97
An informatics-assisted label-free quantitation strategy that depicts phosphoproteomic profiles in lung cancer cell invasion. J Proteome Res (2010) 0.97
A fluorescent carbazole derivative: high sensitivity for quadruplex DNA. Anal Chem (2003) 0.97
Sequential phosphoproteomic enrichment through complementary metal-directed immobilized metal ion affinity chromatography. Anal Chem (2013) 0.96
Investigation of spectral conversion of d(TTAGGG)4 and d(TTAGGG)13 upon potassium titration by a G-quadruplex recognizer BMVC molecule. Nucleic Acids Res (2007) 0.96
Prevalence and genotype identification of human JC virus in colon cancer in Taiwan. J Med Virol (2008) 0.96
The internalized CdSe/ZnS quantum dots impair the chondrogenesis of bone marrow mesenchymal stem cells. J Biomed Mater Res B Appl Biomater (2006) 0.96
Narrowband imaging for early detection of malignant tumors and radiation effect after treatment of head and neck cancer. Arch Otolaryngol Head Neck Surg (2010) 0.96
Trafficking of multipotent mesenchymal stromal cells from maternal circulation through the placenta involves vascular endothelial growth factor receptor-1 and integrins. Stem Cells (2007) 0.95
Contemporary management of penile cancer including surgery and adjuvant radiotherapy: an experience in Taiwan. World J Urol (2003) 0.95
Molecular identification of canine podocalyxin-like protein 1 as a renal tubulogenic regulator. J Am Soc Nephrol (2005) 0.95
An informatics-assisted label-free approach for personalized tissue membrane proteomics: case study on colorectal cancer. Mol Cell Proteomics (2011) 0.94
Targeted disruption of Nphp1 causes male infertility due to defects in the later steps of sperm morphogenesis in mice. Hum Mol Genet (2008) 0.94
Quantitative proteomic analysis of metabolic regulation by copper ions in Methylococcus capsulatus (Bath). J Biol Chem (2004) 0.94
Interplay between SIN3A and STAT3 mediates chromatin conformational changes and GFAP expression during cellular differentiation. PLoS One (2011) 0.94
Cell killing and radiosensitization by caffeic acid phenethyl ester (CAPE) in lung cancer cells. J Radiat Res (2004) 0.93
Temporal proteomics profiling of lipid rafts in CCR6-activated T cells reveals the integration of actin cytoskeleton dynamics. J Proteome Res (2010) 0.93
Hyperbaric oxygen enhances the expression of prion protein and heat shock protein 70 in a mouse neuroblastoma cell line. Cell Mol Neurobiol (2004) 0.93
Globotriose-functionalized gold nanoparticles as multivalent probes for Shiga-like toxin. Chembiochem (2008) 0.93
Stat5 constitutive activation rescues defects in spinal muscular atrophy. Hum Mol Genet (2007) 0.91
The role of IL-6 in the radiation response of prostate cancer. Radiat Oncol (2013) 0.91
Clinicopathologic correlation of up-regulated genes identified using cDNA microarray and real-time reverse transcription-PCR in human colorectal cancer. Cancer Epidemiol Biomarkers Prev (2005) 0.91
In-depth identification of pathways related to cisplatin-induced hepatotoxicity through an integrative method based on an informatics-assisted label-free protein quantitation and microarray gene expression approach. Mol Cell Proteomics (2011) 0.90
RegPhos 2.0: an updated resource to explore protein kinase-substrate phosphorylation networks in mammals. Database (Oxford) (2014) 0.90
The radiation response of hormone-resistant prostate cancer induced by long-term hormone therapy. Endocr Relat Cancer (2007) 0.90
The spinal muscular atrophy disease protein SMN is linked to the Golgi network. PLoS One (2012) 0.90
Nuclear efflux of heterogeneous nuclear ribonucleoprotein C1/C2 in apoptotic cells: a novel nuclear export dependent on Rho-associated kinase activation. J Cell Sci (2004) 0.90