Published in Plant Cell Physiol on August 18, 2008
Advances in omics and bioinformatics tools for systems analyses of plant functions. Plant Cell Physiol (2011) 1.28
Tomato TILLING technology: development of a reverse genetics tool for the efficient isolation of mutants from Micro-Tom mutant libraries. Plant Cell Physiol (2011) 1.19
Biochemical characterization, mitochondrial localization, expression, and potential functions for an Arabidopsis gamma-aminobutyrate transaminase that utilizes both pyruvate and glyoxylate. J Exp Bot (2009) 1.11
Subcellular localization and expression of multiple tomato gamma-aminobutyrate transaminases that utilize both pyruvate and glyoxylate. J Exp Bot (2009) 0.96
Targeted enhancement of glutamate-to-γ-aminobutyrate conversion in Arabidopsis seeds affects carbon-nitrogen balance and storage reserves in a development-dependent manner. Plant Physiol (2011) 0.96
Structure and regulation of the gab gene cluster, involved in the gamma-aminobutyric acid shunt, are controlled by a sigma54 factor in Bacillus thuringiensis. J Bacteriol (2010) 0.89
Seed-specific expression of truncated OsGAD2 produces GABA-enriched rice grains that influence a decrease in blood pressure in spontaneously hypertensive rats. Transgenic Res (2009) 0.86
A tonoplast Glu/Asp/GABA exchanger that affects tomato fruit amino acid composition. Plant J (2015) 0.83
The transcription factor AREB1 regulates primary metabolic pathways in tomato fruits. J Exp Bot (2014) 0.80
Off-the-Vine Ripening of Tomato Fruit Causes Alteration in the Primary Metabolite Composition. Metabolites (2013) 0.78
How and why does tomato accumulate a large amount of GABA in the fruit? Front Plant Sci (2015) 0.78
Functional analysis of tomato calmodulin gene family during fruit development and ripening. Hortic Res (2014) 0.77
RNA-seq analysis of Rubus idaeus cv. Nova: transcriptome sequencing and de novo assembly for subsequent functional genomics approaches. Plant Cell Rep (2014) 0.76
Activating glutamate decarboxylase activity by removing the autoinhibitory domain leads to hyper γ-aminobutyric acid (GABA) accumulation in tomato fruit. Plant Cell Rep (2016) 0.76
Regulation of BZR1 in fruit ripening revealed by iTRAQ proteomics analysis. Sci Rep (2016) 0.75
Evolutionary Trails of Plant Group II Pyridoxal Phosphate-Dependent Decarboxylase Genes. Front Plant Sci (2016) 0.75
GABA selectively increases mucin-1 expression in isolated pig jejunum. Genes Nutr (2015) 0.75
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato. Front Plant Sci (2017) 0.75
Ectopic Expression of CDF3 Genes in Tomato Enhances Biomass Production and Yield under Salinity Stress Conditions. Front Plant Sci (2017) 0.75
An Agrobacterium tumefaciens Strain with Gamma-Aminobutyric Acid Transaminase Activity Shows an Enhanced Genetic Transformation Ability in Plants. Sci Rep (2017) 0.75
Efficient increase of ɣ-aminobutyric acid (GABA) content in tomato fruits by targeted mutagenesis. Sci Rep (2017) 0.75
Identification of two CiGADs from Caragana intermedia and their transcriptional responses to abiotic stresses and exogenous abscisic acid. PeerJ (2017) 0.75
The effect of adenosine monophosphate deaminase overexpression on the accumulation of umami-related metabolites in tomatoes. Plant Cell Rep (2016) 0.75
MassBank: a public repository for sharing mass spectral data for life sciences. J Mass Spectrom (2010) 6.16
Genome-wide analysis of the ERF gene family in Arabidopsis and rice. Plant Physiol (2006) 5.74
Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis. Proc Natl Acad Sci U S A (2007) 4.13
ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis. Nucleic Acids Res (2006) 3.74
Leaf senescence and starvation-induced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene. Plant Physiol (2002) 3.47
Scavenger receptor B2 is a cellular receptor for enterovirus 71. Nat Med (2009) 3.20
Approaches for extracting practical information from gene co-expression networks in plant biology. Plant Cell Physiol (2007) 3.13
Elucidation of gene-to-gene and metabolite-to-gene networks in arabidopsis by integration of metabolomics and transcriptomics. J Biol Chem (2005) 2.98
Six-rowed barley originated from a mutation in a homeodomain-leucine zipper I-class homeobox gene. Proc Natl Acad Sci U S A (2007) 2.82
Glypican-3, overexpressed specifically in human hepatocellular carcinoma, is a novel tumor marker. Biochem Biophys Res Commun (2003) 2.78
12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis. Plant Physiol (2005) 2.72
Six RNA viruses and forty-one hosts: viral small RNAs and modulation of small RNA repertoires in vertebrate and invertebrate systems. PLoS Pathog (2010) 2.62
Molecular ecological analysis of the gastrointestinal microbiota: a review. J Nutr (2004) 2.41
Increased microRNA-1 and microRNA-133a levels in serum of patients with cardiovascular disease indicate myocardial damage. Circ Cardiovasc Genet (2011) 2.14
The alpha/beta interferon response controls tissue tropism and pathogenicity of poliovirus. J Virol (2005) 2.13
Metabolite annotations based on the integration of mass spectral information. Plant J (2008) 1.97
Coordinated activation of metabolic pathways for antioxidants and defence compounds by jasmonates and their roles in stress tolerance in Arabidopsis. Plant J (2005) 1.97
Papillary microcarcinoma. World J Surg (2008) 1.96
Characterization of the ABA-regulated global responses to dehydration in Arabidopsis by metabolomics. Plant J (2008) 1.91
KaPPA-view: a web-based analysis tool for integration of transcript and metabolite data on plant metabolic pathway maps. Plant Physiol (2005) 1.90
Plant foods and herbal sources of resveratrol. J Agric Food Chem (2002) 1.87
Fate and transport of antibiotic residues and antibiotic resistance genes following land application of manure waste. J Environ Qual (2009) 1.74
AtIPT3 is a key determinant of nitrate-dependent cytokinin biosynthesis in Arabidopsis. Plant Cell Physiol (2004) 1.64
MicroRNA-33 deficiency reduces the progression of atherosclerotic plaque in ApoE-/- mice. J Am Heart Assoc (2012) 1.63
The Tomato Sequencing Project, the first cornerstone of the International Solanaceae Project (SOL). Comp Funct Genomics (2005) 1.63
A highly efficient transformation protocol for Micro-Tom, a model cultivar for tomato functional genomics. Plant Cell Physiol (2005) 1.60
Metabolic pathways involved in cold acclimation identified by integrated analysis of metabolites and transcripts regulated by DREB1A and DREB2A. Plant Physiol (2009) 1.60
Metabolic, genomic, and biochemical analyses of glandular trichomes from the wild tomato species Lycopersicon hirsutum identify a key enzyme in the biosynthesis of methylketones. Plant Cell (2005) 1.59
Familial nonmedullary thyroid carcinoma characterized by multifocality and a high recurrence rate in a large study population. World J Surg (2002) 1.56
Large-scale analysis of gene expression profiles during early stages of root nodule formation in a model legume, Lotus japonicus. DNA Res (2004) 1.52
Spermidine synthase genes are essential for survival of Arabidopsis. Plant Physiol (2004) 1.49
Reelevation of parathyroid hormone level after parathyroidectomy in patients with primary hyperparathyroidism: importance of decreased renal parathyroid hormone sensitivity. Surgery (2005) 1.48
Mutational analysis of the APC gene in cribriform-morula variant of papillary thyroid carcinoma. World J Surg (2006) 1.46
In silico polymorphism analysis for the development of simple sequence repeat and transposon markers and construction of linkage map in cultivated peanut. BMC Plant Biol (2012) 1.45
OsHMA3, a P1B-type of ATPase affects root-to-shoot cadmium translocation in rice by mediating efflux into vacuoles. New Phytol (2010) 1.43
Characterization of the antiplatelet effect of aspirin at enrollment and after 2-year follow-up in a real clinical setting in Japan. Circ J (2010) 1.41
Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. BMC Genomics (2010) 1.41
Establishment of a poliovirus oral infection system in human poliovirus receptor-expressing transgenic mice that are deficient in alpha/beta interferon receptor. J Virol (2007) 1.40
Acute doxorubicin cardiotoxicity is associated with miR-146a-induced inhibition of the neuregulin-ErbB pathway. Cardiovasc Res (2010) 1.39
Arabidopsis TRANSPARENT TESTA GLABRA2 is directly regulated by R2R3 MYB transcription factors and is involved in regulation of GLABRA2 transcription in epidermal differentiation. Plant Cell (2007) 1.38
STOP1 regulates multiple genes that protect arabidopsis from proton and aluminum toxicities. Plant Physiol (2009) 1.38
CoP: a database for characterizing co-expressed gene modules with biological information in plants. Bioinformatics (2010) 1.32
Purine and pyrimidine nucleotide metabolism in higher plants. J Plant Physiol (2003) 1.27
Identification of a human SCARB2 region that is important for enterovirus 71 binding and infection. J Virol (2011) 1.26
Analysis of a sugar response mutant of Arabidopsis identified a novel B3 domain protein that functions as an active transcriptional repressor. Plant Physiol (2005) 1.25
Gene expression of ADP-glucose pyrophosphorylase and starch contents in rice cultured cells are cooperatively regulated by sucrose and ABA. Plant Cell Physiol (2005) 1.24
Genetic diversity and diet specificity of ruminal Prevotella revealed by 16S rRNA gene-based analysis. FEMS Microbiol Lett (2010) 1.21
Tomato TILLING technology: development of a reverse genetics tool for the efficient isolation of mutants from Micro-Tom mutant libraries. Plant Cell Physiol (2011) 1.19
Mortality following peripheral infection with tick-borne encephalitis virus results from a combination of central nervous system pathology, systemic inflammatory and stress responses. Virology (2009) 1.18
Novel plant immune-priming compounds identified via high-throughput chemical screening target salicylic acid glucosyltransferases in Arabidopsis. Plant Cell (2012) 1.18
Human SCARB2-dependent infection by coxsackievirus A7, A14, and A16 and enterovirus 71. J Virol (2012) 1.16
TOMATOMA: a novel tomato mutant database distributing Micro-Tom mutant collections. Plant Cell Physiol (2011) 1.16
Molecular characterization of His-Asp phosphorelay signaling factors in maize leaves: implications of the signal divergence by cytokinin-inducible response regulators in the cytosol and the nuclei. Plant Mol Biol (2003) 1.14
Functional comparison of SCARB2 and PSGL1 as receptors for enterovirus 71. J Virol (2013) 1.14
Encephalomyocarditis virus disrupts stress granules, the critical platform for triggering antiviral innate immune responses. J Virol (2013) 1.13
Tumor markers in early diagnosis, follow-up and management of patients with hepatocellular carcinoma. Oncology (2002) 1.13
Role of RIG-I, MDA-5, and PKR on the expression of inflammatory chemokines induced by synthetic dsRNA in airway epithelial cells. Int Arch Allergy Immunol (2007) 1.12
Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant. Plant Cell Physiol (2004) 1.12
Enzymatic functions of wild tomato methylketone synthases 1 and 2. Plant Physiol (2010) 1.12
Arabidopsis cotyledon-specific chloroplast biogenesis factor CYO1 is a protein disulfide isomerase. Plant Cell (2007) 1.11
Clarification of pathway-specific inhibition by Fourier transform ion cyclotron resonance/mass spectrometry-based metabolic phenotyping studies. Plant Physiol (2006) 1.11
Subcellular localization and membrane topology of the melon ethylene receptor CmERS1. Plant Physiol (2006) 1.10
MicroRNA-27a regulates beta cardiac myosin heavy chain gene expression by targeting thyroid hormone receptor beta1 in neonatal rat ventricular myocytes. Mol Cell Biol (2010) 1.09
Contrasting dynamics of radial O2-loss barrier induction and aerenchyma formation in rice roots of two lengths. Ann Bot (2010) 1.09
The TLR3/TICAM-1 pathway is mandatory for innate immune responses to poliovirus infection. J Immunol (2011) 1.08
Cytochrome P450 CYP710A encodes the sterol C-22 desaturase in Arabidopsis and tomato. Plant Cell (2006) 1.07
Brachiocephalic vein thrombus of papillary thyroid cancer: report of a case. Surg Today (2002) 1.07
Tetracycline residues and tetracycline resistance genes in groundwater impacted by swine production facilities. Anim Biotechnol (2006) 1.06
Distinctive features of plant organs characterized by global analysis of gene expression in Arabidopsis. DNA Res (2004) 1.06
Induction of granulocyte-macrophage colony-stimulating factor by a new cytokine, ML-1 (IL-17F), via Raf I-MEK-ERK pathway. J Allergy Clin Immunol (2004) 1.05
Functional analysis of isoforms of NADPH: protochlorophyllide oxidoreductase (POR), PORB and PORC, in Arabidopsis thaliana. Plant Cell Physiol (2003) 1.05
Ethylene advances the transition from vegetative growth to flowering in Arabidopsis thaliana. J Plant Physiol (2003) 1.05
Molecular microbial ecology of the gastrointestinal tract: from phylogeny to function. Curr Issues Intest Microbiol (2004) 1.04
Natural variation of Arabidopsis thaliana reveals that aluminum resistance and proton resistance are controlled by different genetic factors. Theor Appl Genet (2007) 1.04
Isolation of a new dual-functional caffeine synthase gene encoding an enzyme for the conversion of 7-methylxanthine to caffeine from coffee (Coffea arabica L.). FEBS Lett (2003) 1.03
Comparative analysis of expressed sequence tags in resistant and susceptible ecotypes of Arabidopsis thaliana infected with cucumber mosaic virus. Plant Cell Physiol (2004) 1.02
Metabolic alterations in organic acids and gamma-aminobutyric acid in developing tomato (Solanum lycopersicum L.) fruits. Plant Cell Physiol (2010) 1.02
Metabolic profiling of flavonoids in Lotus japonicus using liquid chromatography Fourier transform ion cyclotron resonance mass spectrometry. Phytochemistry (2007) 1.02
Identification and characterization of ANAC042, a transcription factor family gene involved in the regulation of camalexin biosynthesis in Arabidopsis. Mol Plant Microbe Interact (2012) 1.02
Genome-wide identification and expression analysis of aquaporins in tomato. PLoS One (2013) 1.01
Genome-wide SNP genotyping to infer the effects on gene functions in tomato. DNA Res (2013) 1.01
A single recessive gene controls cadmium translocation in the cadmium hyperaccumulating rice cultivar Cho-Ko-Koku. Theor Appl Genet (2009) 1.01
A new MADS-box gene (IbMADS10) from sweet potato (Ipomoea batatas (L.) Lam) is involved in the accumulation of anthocyanin. Mol Genet Genomics (2005) 1.01
Leaf oil body functions as a subcellular factory for the production of a phytoalexin in Arabidopsis. Plant Physiol (2013) 1.00