Published in J Mol Biol on August 09, 2008
Engineering microbes to sense and eradicate Pseudomonas aeruginosa, a human pathogen. Mol Syst Biol (2011) 2.59
Engineering multicellular systems by cell-cell communication. Curr Opin Biotechnol (2009) 0.92
A modular positive feedback-based gene amplifier. J Biol Eng (2010) 0.91
Stochastic simulations of a synthetic bacteria-yeast ecosystem. BMC Syst Biol (2012) 0.84
Quorum sensing in bacteria. Annu Rev Microbiol (2001) 14.41
Quorum sensing: cell-to-cell communication in bacteria. Annu Rev Cell Dev Biol (2005) 13.88
Census and consensus in bacterial ecosystems: the LuxR-LuxI family of quorum-sensing transcriptional regulators. Annu Rev Microbiol (1996) 10.26
Kinetic proofreading: a new mechanism for reducing errors in biosynthetic processes requiring high specificity. Proc Natl Acad Sci U S A (1974) 9.17
Regulation of gene expression by cell-to-cell communication: acyl-homoserine lactone quorum sensing. Annu Rev Genet (2001) 7.63
A synthetic multicellular system for programmed pattern formation. Nature (2005) 6.93
Kinetic proofreading in T-cell receptor signal transduction. Proc Natl Acad Sci U S A (1995) 5.01
Kinetic amplification of enzyme discrimination. Biochimie (1975) 4.95
Programmable cells: interfacing natural and engineered gene networks. Proc Natl Acad Sci U S A (2004) 4.72
Long-term monitoring of bacteria undergoing programmed population control in a microchemostat. Science (2005) 3.54
A synthetic Escherichia coli predator-prey ecosystem. Mol Syst Biol (2008) 2.92
The quorum-sensing transcriptional regulator TraR requires its cognate signaling ligand for protein folding, protease resistance, and dimerization. Proc Natl Acad Sci U S A (2001) 2.88
Autoinducer binding by the quorum-sensing regulator TraR increases affinity for target promoters in vitro and decreases TraR turnover rates in whole cells. Proc Natl Acad Sci U S A (1999) 2.87
The C-terminal region of the Vibrio fischeri LuxR protein contains an inducer-independent lux gene activating domain. Proc Natl Acad Sci U S A (1991) 2.75
Promoter specificity in Pseudomonas aeruginosa quorum sensing revealed by DNA binding of purified LasR. Proc Natl Acad Sci U S A (2004) 2.69
SdiA of Salmonella enterica is a LuxR homolog that detects mixed microbial communities. J Bacteriol (2001) 2.23
Dual selection enhances the signaling specificity of a variant of the quorum-sensing transcriptional activator LuxR. Nat Biotechnol (2006) 2.17
Engineered bidirectional communication mediates a consensus in a microbial biofilm consortium. Proc Natl Acad Sci U S A (2007) 2.14
Reversible acyl-homoserine lactone binding to purified Vibrio fischeri LuxR protein. J Bacteriol (2004) 2.06
Carbapenem antibiotic production in Erwinia carotovora is regulated by CarR, a homologue of the LuxR transcriptional activator. Microbiology (1995) 1.98
N-acyl homoserine lactone binding to the CarR receptor determines quorum-sensing specificity in Erwinia. EMBO J (2000) 1.92
Molecular insights into quorum sensing in the human pathogen Pseudomonas aeruginosa from the structure of the virulence regulator LasR bound to its autoinducer. J Biol Chem (2007) 1.89
Quorum-sensing signal binding results in dimerization of TraR and its release from membranes into the cytoplasm. EMBO J (2000) 1.83
Structure of the Escherichia coli quorum sensing protein SdiA: activation of the folding switch by acyl homoserine lactones. J Mol Biol (2005) 1.74
The evolutionary history of quorum-sensing systems in bacteria. Mol Biol Evol (2004) 1.70
Nonlinear protein degradation and the function of genetic circuits. Proc Natl Acad Sci U S A (2005) 1.65
A kinetic proofreading mechanism for disentanglement of DNA by topoisomerases. Nature (1999) 1.50
Directed evolution of Vibrio fischeri LuxR for increased sensitivity to a broad spectrum of acyl-homoserine lactones. Mol Microbiol (2005) 1.43
Detection of other microbial species by Salmonella: expression of the SdiA regulon. J Bacteriol (2003) 1.42
The role of proofreading in signal transduction specificity. Biophys J (2002) 1.34
Mechanism of Pseudomonas aeruginosa RhlR transcriptional regulation of the rhlAB promoter. J Bacteriol (2003) 1.22
Synthesis of N-acyl homoserine lactone analogues reveals strong activators of SdiA, the Salmonella enterica serovar Typhimurium LuxR homologue. Appl Environ Microbiol (2006) 1.14
Noise reduction by diffusional dissipation in a minimal quorum sensing motif. PLoS Comput Biol (2008) 1.12
Integration of the quorum-sensing system in the regulatory networks controlling virulence factor synthesis in Erwinia chrysanthemi. Mol Microbiol (1998) 1.12
Direct binding of the quorum sensing regulator CepR of Burkholderia cenocepacia to two target promoters in vitro. Mol Microbiol (2005) 1.09
Quorum sensing and bacterial cross-talk in biotechnology. Curr Opin Biotechnol (2004) 1.09
Direct evidence for the modulation of the activity of the Erwinia chrysanthemi quorum-sensing regulator ExpR by acylhomoserine lactone pheromone. J Biol Chem (2006) 1.04
Site-directed mutagenesis of a LuxR-type quorum-sensing transcription factor: alteration of autoinducer specificity. Mol Microbiol (2004) 1.03
Dimerization of the quorum sensing regulator RhlR: development of a method using EGFP fluorescence anisotropy. Mol Microbiol (2003) 1.03
Sensing and integration of Erk and PI3K signals by Myc. PLoS Comput Biol (2008) 1.03
Reducing intrinsic biochemical noise in cells and its thermodynamic limit. J Mol Biol (2006) 0.94
Amino-terminal protein fusions to the TraR quorum-sensing transcription factor enhance protein stability and autoinducer-independent activity. J Bacteriol (2005) 0.87
Evolving sensitivity. ACS Chem Biol (2006) 0.80
Long-term monitoring of bacteria undergoing programmed population control in a microchemostat. Science (2005) 3.54
Engineering microbial consortia: a new frontier in synthetic biology. Trends Biotechnol (2008) 3.26
MicroRNA Mirn140 modulates Pdgf signaling during palatogenesis. Nat Genet (2008) 3.01
A synthetic Escherichia coli predator-prey ecosystem. Mol Syst Biol (2008) 2.92
A bistable Rb-E2F switch underlies the restriction point. Nat Cell Biol (2008) 2.91
Emergent bistability by a growth-modulating positive feedback circuit. Nat Chem Biol (2009) 2.86
Structures and receptor binding of hemagglutinins from human-infecting H7N9 influenza viruses. Science (2013) 2.34
Image segmentation and dynamic lineage analysis in single-cell fluorescence microscopy. Cytometry A (2010) 1.75
Factors that influence general internists' and surgeons' performance on maintenance of certification exams. Acad Med (2011) 1.43
Biology by design: reduction and synthesis of cellular components and behaviour. J R Soc Interface (2007) 1.33
Origin of bistability underlying mammalian cell cycle entry. Mol Syst Biol (2011) 1.32
Optimality and robustness in quorum sensing (QS)-mediated regulation of a costly public good enzyme. Proc Natl Acad Sci U S A (2012) 1.27
Network calisthenics: control of E2F dynamics in cell cycle entry. Cell Cycle (2011) 1.25
3D graphene foam as a monolithic and macroporous carbon electrode for electrochemical sensing. ACS Appl Mater Interfaces (2012) 1.17
A synthetic biology challenge: making cells compute. Mol Biosyst (2007) 1.14
Noise reduction by diffusional dissipation in a minimal quorum sensing motif. PLoS Comput Biol (2008) 1.12
Optimal tuning of bacterial sensing potential. Mol Syst Biol (2009) 1.12
Temporal control of self-organized pattern formation without morphogen gradients in bacteria. Mol Syst Biol (2013) 1.11
Biomimetic approach to perophoramidine and communesin via an intramolecular cyclopropanation reaction. Org Lett (2006) 1.09
Spatiotemporal modulation of biodiversity in a synthetic chemical-mediated ecosystem. Nat Chem Biol (2009) 1.05
Viral-mediated noisy gene expression reveals biphasic E2f1 response to MYC. Mol Cell (2011) 1.03
Programming stress-induced altruistic death in engineered bacteria. Mol Syst Biol (2012) 1.03
Stochastic E2F activation and reconciliation of phenomenological cell-cycle models. PLoS Biol (2010) 1.03
Sensing and integration of Erk and PI3K signals by Myc. PLoS Comput Biol (2008) 1.03
Oscillations by minimal bacterial suicide circuits reveal hidden facets of host-circuit physiology. PLoS One (2010) 1.02
Total synthesis of (+/-)-marinopyrrole A and its library as potential antibiotic and anticancer agents. J Comb Chem (2010) 1.01
Metabolome profiling reveals metabolic cooperation between Bacillus megaterium and Ketogulonicigenium vulgare during induced swarm motility. Appl Environ Microbiol (2011) 1.01
A programmable microenvironment for cellular studies via microfluidics-generated double emulsions. Biomaterials (2013) 0.99
Noise-limited frequency signal transmission in gene circuits. Biophys J (2007) 0.99
Engineering microbial systems to explore ecological and evolutionary dynamics. Curr Opin Biotechnol (2012) 0.99
Macroporous and monolithic anode based on polyaniline hybridized three-dimensional graphene for high-performance microbial fuel cells. ACS Nano (2012) 0.97
The inoculum effect and band-pass bacterial response to periodic antibiotic treatment. Mol Syst Biol (2012) 0.96
Engineering multicellular systems by cell-cell communication. Curr Opin Biotechnol (2009) 0.92
Total synthesis of indoline alkaloids: A cyclopropanation strategy. Acc Chem Res (2011) 0.92
Engineering global transcription factor cyclic AMP receptor protein of Escherichia coli for improved 1-butanol tolerance. Appl Microbiol Biotechnol (2012) 0.92
Upregulation of survivin by leptin/STAT3 signaling in MCF-7 cells. Biochem Biophys Res Commun (2007) 0.91
Enhancement of 2-keto-gulonic acid yield by serial subcultivation of co-cultures of Bacillus cereus and Ketogulonicigenium vulgare. Bioresour Technol (2012) 0.90
Decoding biological principles using gene circuits. Mol Biosyst (2009) 0.90
Engineering PQS biosynthesis pathway for enhancement of bioelectricity production in pseudomonas aeruginosa microbial fuel cells. PLoS One (2013) 0.89
Programmed Allee effect in bacteria causes a tradeoff between population spread and survival. Proc Natl Acad Sci U S A (2014) 0.89
Programmed cell death in bacteria and implications for antibiotic therapy. Trends Microbiol (2013) 0.89
Enhanced expression of genes involved in initial xylose metabolism and the oxidative pentose phosphate pathway in the improved xylose-utilizing Saccharomyces cerevisiae through evolutionary engineering. J Ind Microbiol Biotechnol (2013) 0.88
FOXO transcription factors control E2F1 transcriptional specificity and apoptotic function. Cancer Res (2013) 0.87
A synthetic biology approach to understanding cellular information processing. ACS Synth Biol (2012) 0.87
Combinational expression of sorbose/sorbosone dehydrogenases and cofactor pyrroloquinoline quinone increases 2-keto-L-gulonic acid production in Ketogulonigenium vulgare-Bacillus cereus consortium. Metab Eng (2013) 0.86
Computation of steady-state probability distributions in stochastic models of cellular networks. PLoS Comput Biol (2011) 0.86
Proliferation behavior of E. coli in a three-dimensional in vitro tumor model. Integr Biol (Camb) (2011) 0.86
Increase of riboflavin biosynthesis underlies enhancement of extracellular electron transfer of Shewanella in alkaline microbial fuel cells. Bioresour Technol (2012) 0.86
Identification of nucleolar and coiled-body phosphoprotein 1 (NOLC1) minimal promoter regulated by NF-κB and CREB. BMB Rep (2011) 0.85
Marinopyrrole derivatives as potential antibiotic agents against methicillin-resistant Staphylococcus aureus (II). Mar Drugs (2013) 0.85
Enhancing E. coli isobutanol tolerance through engineering its global transcription factor cAMP receptor protein (CRP). Biotechnol Bioeng (2013) 0.85
Improving ethanol tolerance of Escherichia coli by rewiring its global regulator cAMP receptor protein (CRP). PLoS One (2013) 0.85
Synthetic biology: Division of logic labour. Nature (2011) 0.85
Graphene/carbon cloth anode for high-performance mediatorless microbial fuel cells. Bioresour Technol (2012) 0.84
Inhibition of hepatocellular carcinoma growth using immunoliposomes for co-delivery of adriamycin and ribonucleotide reductase M2 siRNA. Biomaterials (2013) 0.83
Optimization of CDT-1 and XYL1 expression for balanced co-production of ethanol and xylitol from cellobiose and xylose by engineered Saccharomyces cerevisiae. PLoS One (2013) 0.82
Improving acetate tolerance of Escherichia coli by rewiring its global regulator cAMP receptor protein (CRP). PLoS One (2013) 0.82
Influence of outer membrane c-type cytochromes on particle size and activity of extracellular nanoparticles produced by Shewanella oneidensis. Biotechnol Bioeng (2013) 0.82
Template-free pseudomorphic synthesis of tungsten carbide nanorods. Small (2012) 0.82
Tension and robustness in multitasking cellular networks. PLoS Comput Biol (2012) 0.82
The biosynthesis of palladium nanoparticles by antioxidants in Gardenia jasminoides Ellis: long lifetime nanocatalysts for p-nitrotoluene hydrogenation. Nanotechnology (2009) 0.81
Bayesian learning from marginal data in bionetwork models. Stat Appl Genet Mol Biol (2011) 0.81
Highly active bidirectional electron transfer by a self-assembled electroactive reduced-graphene-oxide-hybridized biofilm. Angew Chem Int Ed Engl (2014) 0.80
Evolving sensitivity. ACS Chem Biol (2006) 0.80
Engineered cell-cell communication and its applications. Adv Biochem Eng Biotechnol (2014) 0.80
Programming microbial population dynamics by engineered cell-cell communication. Biotechnol J (2011) 0.80
A brave new synthetic world. A report of the first meeting on 'Frontiers in Synthetic Biology', Boston, USA, 1-2 December 2008. Genome Biol (2009) 0.80
Disc positions and condylar changes induced by different stretching forces in the model for anterior disc displacement of temporomandibular joint. J Craniofac Surg (2014) 0.79
Enhancement of extracellular electron transfer and bioelectricity output by synthetic porin. Biotechnol Bioeng (2012) 0.79
Generic metric to quantify quorum sensing activation dynamics. ACS Synth Biol (2013) 0.79
Bladder management of patients with spinal cord injuries sustained in the 2008 Wenchuan earthquake. Kaohsiung J Med Sci (2012) 0.79
Bioelectricity enhancement via overexpression of quorum sensing system in Pseudomonas aeruginosa-inoculated microbial fuel cells. Biosens Bioelectron (2011) 0.78
Fertility in older women following removal of long-term intrauterine devices in the wake of a natural disaster. Contraception (2012) 0.78
Cell biology. Cells listen to their inner voice. Science (2014) 0.78
Relationship between COMLEX-USA scores and performance on the American Osteopathic Board of Emergency Medicine Part I certifying examination. J Am Osteopath Assoc (2014) 0.78
An improved risk of malignancy index in diagnosis of adnexal mass. Chin Med J (Engl) (2012) 0.78
Addressing biological uncertainties in engineering gene circuits. Integr Biol (Camb) (2015) 0.77
HtrA1 expression associated with the occurrence and development of esophageal cancer. World J Surg Oncol (2012) 0.77
CD20 Antibody-Conjugated Immunoliposomes for Targeted Chemotherapy of Melanoma Cancer Initiating Cells. J Biomed Nanotechnol (2015) 0.77
An in silico erythropoiesis model rationalizing synergism between stem cell factor and erythropoietin. Bioprocess Biosyst Eng (2013) 0.77
Preparation of fluorescent mesoporous hollow silica-fullerene nanoparticles via selective etching for combined chemotherapy and photodynamic therapy. Nanoscale (2015) 0.77
Deletion of D-ribulose-5-phosphate 3-epimerase (RPE1) induces simultaneous utilization of xylose and glucose in xylose-utilizing Saccharomyces cerevisiae. Biotechnol Lett (2014) 0.77
Conductive artificial biofilm dramatically enhances bioelectricity production in Shewanella-inoculated microbial fuel cells. Chem Commun (Camb) (2011) 0.77
Programming the quorum sensing-based AND gate in Shewanella oneidensis for logic gated-microbial fuel cells. Chem Commun (Camb) (2015) 0.77
Effects of the Herbicide Imazethapyr on Photosynthesis in PGR5- and NDH-Deficient Arabidopsis thaliana at the Biochemical, Transcriptomic, and Proteomic Levels. J Agric Food Chem (2016) 0.77
Characterization of porcine P58IPK gene and its up-regulation after H1N1 or H3N2 influenza virus infection. J Clin Virol (2013) 0.76
A whole more than the sum of its synthetic parts. ACS Chem Biol (2008) 0.76
Functional analysis of BRCA1 missense variants of uncertain significance in Japanese breast cancer families. J Hum Genet (2013) 0.76
The influence of surface trapping and dark states on the fluorescence emission efficiency and lifetime of CdSe and CdSe/ZnS quantum dots. J Fluoresc (2007) 0.76
Quantitative analysis of the spatiotemporal dynamics of a synthetic predator-prey ecosystem. Methods Mol Biol (2012) 0.76
Correction: An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism. PLoS Pathog (2016) 0.75
Metabolic changes in normal appearing white matter in multiple sclerosis patients using multivoxel magnetic resonance spectroscopy imaging. Medicine (Baltimore) (2017) 0.75
Crystal structures of the two membrane-proximal Ig-like domains (D3D4) of LILRB1/B2: alternative models for their involvement in peptide-HLA binding. Protein Cell (2013) 0.75
Visualization and quantitation of fetal movements by real-time three-dimensional ultrasound with live xPlane imaging in the first trimester of pregnancy. Croat Med J (2016) 0.75
Reversal of multidrug resistance in vitro and in vivo by 5-N-formylardeemin, a new ardeemin derivative. Apoptosis (2014) 0.75
Antibody-targeted immunoliposomes for cancer treatment. Mini Rev Med Chem (2013) 0.75