Published in J Exp Bot on January 01, 2009
RefGenes: identification of reliable and condition specific reference genes for RT-qPCR data normalization. BMC Genomics (2011) 2.14
Stable internal reference genes for normalization of real-time RT-PCR in tobacco (Nicotiana tabacum) during development and abiotic stress. Mol Genet Genomics (2010) 1.83
Reference genes for accurate transcript normalization in citrus genotypes under different experimental conditions. PLoS One (2012) 1.77
Reference genes in real-time PCR. J Appl Genet (2013) 1.75
Selection of reference genes for quantitative gene expression normalization in flax (Linum usitatissimum L.). BMC Plant Biol (2010) 1.67
Identification of reference genes for quantitative expression analysis of microRNAs and mRNAs in barley under various stress conditions. PLoS One (2015) 1.49
Evaluation of candidate reference genes for gene expression normalization in Brassica juncea using real time quantitative RT-PCR. PLoS One (2012) 1.49
Reference genes selection and normalization of oxidative stress responsive genes upon different temperature stress conditions in Hypericum perforatum L. PLoS One (2014) 1.46
Evaluation of candidate reference genes for expression studies in Pisum sativum under different experimental conditions. Planta (2010) 1.45
Defining reference genes in Oryza sativa using organ, development, biotic and abiotic transcriptome datasets. BMC Plant Biol (2010) 1.41
The Tinkerbell (Tink) Mutation Identifies the Dual-Specificity MAPK Phosphatase INDOLE-3-BUTYRIC ACID-RESPONSE5 (IBR5) as a Novel Regulator of Organ Size in Arabidopsis. PLoS One (2015) 1.40
Identification of suitable reference genes for normalization of qPCR data in comparative transcriptomics analyses in the Triticeae. Planta (2010) 1.28
Reference gene selection for quantitative real-time PCR normalization in Caragana intermedia under different abiotic stress conditions. PLoS One (2013) 1.26
Validation of reference genes for gene expression studies in virus-infected Nicotiana benthamiana using quantitative real-time PCR. PLoS One (2012) 1.21
A guideline to family-wide comparative state-of-the-art quantitative RT-PCR analysis exemplified with a Brassicaceae cross-species seed germination case study. Plant Cell (2011) 1.15
Choreography of Transcriptomes and Lipidomes of Nannochloropsis Reveals the Mechanisms of Oil Synthesis in Microalgae. Plant Cell (2014) 1.14
Identification of suitable reference genes for gene expression normalization in qRT-PCR analysis in watermelon. PLoS One (2014) 1.14
Gene expression results in lipopolysaccharide-stimulated monocytes depend significantly on the choice of reference genes. BMC Immunol (2010) 1.11
Identification of superior reference genes for data normalisation of expression studies via quantitative PCR in hybrid roses (Rosa hybrida). BMC Res Notes (2011) 1.09
Assessing the performance capabilities of LRE-based assays for absolute quantitative real-time PCR. PLoS One (2010) 1.09
Selection of suitable reference genes for qPCR normalization under abiotic stresses and hormone stimuli in carrot leaves. PLoS One (2015) 1.07
Murine 3T3-L1 adipocyte cell differentiation model: validated reference genes for qPCR gene expression analysis. PLoS One (2012) 1.06
Reference gene selection for quantitative reverse transcription-polymerase chain reaction normalization during in vitro adventitious rooting in Eucalyptus globulus Labill. BMC Mol Biol (2010) 1.03
Comparison of predictive methods and biological validation for qPCR reference genes in sunflower leaf senescence transcript analysis. Plant Cell Rep (2010) 1.02
Evaluation of reference genes for accurate normalization of gene expression for real time-quantitative PCR in Pyrus pyrifolia using different tissue samples and seasonal conditions. PLoS One (2014) 1.02
Identification of reference genes suitable for qRT-PCR in grapevine and application for the study of the expression of genes involved in pterostilbene synthesis. Mol Genet Genomics (2011) 1.02
Selection of reliable reference genes for gene expression studies in the biofuel plant Jatropha curcas using real-time quantitative PCR. Int J Mol Sci (2013) 1.01
Selection and validation of reference genes for quantitative RT-PCR expression studies of the non-model crop Musa. Mol Breed (2012) 1.01
Identification and testing of reference genes for Sesame gene expression analysis by quantitative real-time PCR. Planta (2012) 1.01
Selection and validation of endogenous reference genes for qRT-PCR analysis in leafy spurge (Euphorbia esula). PLoS One (2012) 1.00
Validation of suitable reference genes for gene expression analysis in the halophyte Salicornia europaea by real-time quantitative PCR. Front Plant Sci (2015) 0.99
Evaluation of reference genes for RT-qPCR expression studies in hop (Humulus lupulus L.) during infection with vascular pathogen verticillium albo-atrum. PLoS One (2013) 0.98
Reliable gene expression analysis by reverse transcription-quantitative PCR: reporting and minimizing the uncertainty in data accuracy. Plant Cell (2014) 0.98
Selection of suitable reference genes for qRT-PCR normalization during leaf development and hormonal stimuli in tea plant (Camellia sinensis). Sci Rep (2016) 0.98
Selection of suitable reference genes for assessing gene expression in pearl millet under different abiotic stresses and their combinations. Sci Rep (2016) 0.97
Identification and validation of reference genes for transcript normalization in strawberry (Fragaria × ananassa) defense responses. PLoS One (2013) 0.97
Reference genes for quantitative reverse transcription-polymerase chain reaction expression studies in wild and cultivated peanut. BMC Res Notes (2011) 0.97
Validation of housekeeping genes for gene expression studies in an ice alga Chlamydomonas during freezing acclimation. Extremophiles (2012) 0.96
Superior cross-species reference genes: a blueberry case study. PLoS One (2013) 0.96
SASqPCR: robust and rapid analysis of RT-qPCR data in SAS. PLoS One (2012) 0.96
Selection of reference genes for quantitative reverse-transcription polymerase chain reaction normalization in Brassica napus under various stress conditions. Mol Genet Genomics (2014) 0.95
How to perform RT-qPCR accurately in plant species? A case study on flower colour gene expression in an azalea (Rhododendron simsii hybrids) mapping population. BMC Mol Biol (2013) 0.94
Validation of housekeeping gene and impact on normalized gene expression in clear cell renal cell carcinoma: critical reassessment of YBX3/ZONAB/CSDA expression. BMC Mol Biol (2014) 0.93
High throughput screening for small molecule enhancers of the interferon signaling pathway to drive next-generation antiviral drug discovery. PLoS One (2012) 0.93
Getting real with real-time qPCR: a case study of reference gene selection for morphological variation in Drosophila melanogaster wings. Dev Genes Evol (2011) 0.92
Reference gene selection for normalization of RT-qPCR gene expression data from Actinidia deliciosa leaves infected with Pseudomonas syringae pv. actinidiae. Sci Rep (2015) 0.91
Microarray-based uncovering reference genes for quantitative real time PCR in grapevine under abiotic stress. BMC Res Notes (2012) 0.90
Assessing reference genes for accurate transcript normalization using quantitative real-time PCR in pearl millet [Pennisetum glaucum (L.) R. Br]. PLoS One (2014) 0.89
Validation of the β-amy1 transcription profiling assay and selection of reference genes suited for a RT-qPCR assay in developing barley caryopsis. PLoS One (2012) 0.88
Identification of two putative reference genes from grapevine suitable for gene expression analysis in berry and related tissues derived from RNA-Seq data. BMC Genomics (2013) 0.88
Evaluation of qPCR reference genes in two genotypes of Populus for use in photoperiod and low-temperature studies. BMC Res Notes (2012) 0.87
TqPCR: A Touchdown qPCR Assay with Significantly Improved Detection Sensitivity and Amplification Efficiency of SYBR Green qPCR. PLoS One (2015) 0.87
A method for combining RNAscope in situ hybridization with immunohistochemistry in thick free-floating brain sections and primary neuronal cultures. PLoS One (2015) 0.86
Selection of suitable reference genes for normalization of quantitative real-time polymerase chain reaction in human cartilage endplate of the lumbar spine. PLoS One (2014) 0.86
Stable internal reference genes for the normalization of real-time PCR in different sweetpotato cultivars subjected to abiotic stress conditions. PLoS One (2012) 0.85
Genome-Wide Identification and Validation of Reference Genes in Infected Tomato Leaves for Quantitative RT-PCR Analyses. PLoS One (2015) 0.85
Identification of condition-specific reference genes from microarray data for locusts exposed to hypobaric hypoxia. FEBS Open Bio (2012) 0.85
Reference gene selection for qPCR in Ammopiptanthus mongolicus under abiotic stresses and expression analysis of seven ROS-scavenging enzyme genes. Plant Cell Rep (2012) 0.85
Validation of reference genes aiming accurate normalization of qRT-PCR data in Dendrocalamus latiflorus Munro. PLoS One (2014) 0.84
Suitable housekeeping genes for normalization of transcript abundance analysis by real-time RT-PCR in cultured bovine granulosa cells during hypoxia and differential cell plating density. Reprod Biol Endocrinol (2014) 0.83
Validation of Suitable Reference Genes for Quantitative Gene Expression Analysis in Panax ginseng. Front Plant Sci (2016) 0.83
Interferon response and respiratory virus control are preserved in bronchial epithelial cells in asthma. J Allergy Clin Immunol (2014) 0.83
Molecular genomic research designs. Annu Rev Nurs Res (2011) 0.83
Identification and validation of suitable housekeeping genes for normalizing quantitative real-time PCR assays in injured peripheral nerves. PLoS One (2014) 0.83
Comprehensive selection of reference genes for quantitative gene expression analysis during seed development in Brassica napus. Plant Cell Rep (2015) 0.83
Developmental and cell type characterization of bundle sheath and mesophyll chloroplast transcript abundance in maize. Curr Genet (2010) 0.82
Selection and validation of reference genes for quantitative gene expression studies in Erythroxylum coca. F1000Res (2013) 0.82
Selection of reference genes for quantitative real time PCR (qPCR) assays in tissue from human ascending aorta. PLoS One (2014) 0.82
Reference genes selection for transcript normalization in kenaf (Hibiscus cannabinus L.) under salinity and drought stress. PeerJ (2015) 0.81
Identification and validation of reference genes for expression studies in human keratinocyte cell lines treated with and without interferon-γ - a method for qRT-PCR reference gene determination. Exp Dermatol (2012) 0.81
The Genetic Architecture of Natural Variation in Recombination Rate in Drosophila melanogaster. PLoS Genet (2016) 0.81
Identification of reference genes for qRT-PCR analysis in Yesso scallop Patinopecten yessoensis. PLoS One (2013) 0.81
Evaluation of Appropriate Reference Genes for Gene Expression Normalization during Watermelon Fruit Development. PLoS One (2015) 0.81
Identification of Suitable Reference Genes for Gene Expression Normalization in the Quantitative Real-Time PCR Analysis of Sweet Osmanthus (Osmanthus fragrans Lour.). PLoS One (2015) 0.81
Gene silencing by cell-penetrating, sequence-selective and nucleic-acid hydrolyzing antibodies. Nucleic Acids Res (2009) 0.80
High-throughput screening normalized to biological response: application to antiviral drug discovery. J Biomol Screen (2013) 0.80
Alfalfa Cellulose synthase gene expression under abiotic stress: a Hitchhiker's guide to RT-qPCR normalization. PLoS One (2014) 0.80
qRT-PCR: a method and its difficulties. Naunyn Schmiedebergs Arch Pharmacol (2012) 0.80
Validation of endogenous reference genes in Buglossoides arvensis for normalizing RT-qPCR-based gene expression data. Springerplus (2015) 0.79
Selection of reference genes for transcriptional analysis of edible tubers of potato (Solanum tuberosum L.). PLoS One (2015) 0.79
The LuWD40-1 gene encoding WD repeat protein regulates growth and pollen viability in flax (Linum Usitatissimum L.). PLoS One (2013) 0.79
Normalization using ploidy and genomic DNA copy number allows absolute quantification of transcripts, proteins and metabolites in cells. Plant Methods (2010) 0.79
Chlamydomonas Flavodiiron Proteins Facilitate Acclimation to Anoxia During Sulfur Deprivation. Plant Cell Physiol (2015) 0.79
Validation of novel reference genes for reverse transcription quantitative real-time PCR in drought-stressed sugarcane. ScientificWorldJournal (2014) 0.79
Rice leaf angle and grain size are affected by the OsBUL1 transcriptional activator complex. Plant Physiol (2016) 0.78
Quantitative analysis of BDNF/TrkB protein and mRNA in cortical and striatal neurons using α-tubulin as a normalization factor. Cytometry A (2012) 0.78
Identification of suitable qPCR reference genes in leaves of Brassica oleracea under abiotic stresses. Ecotoxicology (2014) 0.78
Validation of RPS13 as a reference gene for absolute quantification of SIV RNA in tissue of rhesus macaques. J Virol Methods (2016) 0.78
Identification and validation of superior reference gene for gene expression normalization via RT-qPCR in staminate and pistillate flowers of Jatropha curcas - A biodiesel plant. PLoS One (2017) 0.78
Validation of reference genes from Eucalyptus spp. under different stress conditions. BMC Res Notes (2012) 0.77
Identification and Evaluation of Reference Genes for Accurate Transcription Normalization in Safflower under Different Experimental Conditions. PLoS One (2015) 0.77
Identification and characterization of re-citrate synthase in Syntrophus aciditrophicus. J Bacteriol (2013) 0.77
Expression of drug transporters in human kidney: impact of sex, age, and ethnicity. Biol Sex Differ (2015) 0.77
Validation of Suitable Reference Genes for RT-qPCR Data in Achyranthes bidentata Blume under Different Experimental Conditions. Front Plant Sci (2017) 0.77
Identification of Optimal Reference Genes for Normalization of qPCR Analysis during Pepper Fruit Development. Front Plant Sci (2017) 0.77
Reference Gene Selection for qRT-PCR Normalization Analysis in kenaf (Hibiscus cannabinus L.) under Abiotic Stress and Hormonal Stimuli. Front Plant Sci (2017) 0.76
Selection of reference genes for expression analysis in the entomophthoralean fungus Pandora neoaphidis. Braz J Microbiol (2016) 0.76
Assessment of Suitable Reference Genes for Quantitative Gene Expression Studies in Melon Fruits. Front Plant Sci (2016) 0.76
Identification and Evaluation of Reference Genes for Quantitative Analysis of Brazilian Pine (Araucaria angustifolia Bertol. Kuntze) Gene Expression. PLoS One (2015) 0.76
Calcium at the crossroads of signaling. Plant Cell (2002) 4.48
The lack of a systematic validation of reference genes: a serious pitfall undervalued in reverse transcription-polymerase chain reaction (RT-PCR) analysis in plants. Plant Biotechnol J (2008) 3.81
The vacuolar Ca2+-activated channel TPC1 regulates germination and stomatal movement. Nature (2005) 2.67
Towards a systematic validation of references in real-time rt-PCR. Plant Cell (2008) 2.37
Auxin and light control of adventitious rooting in Arabidopsis require ARGONAUTE1. Plant Cell (2005) 1.99
Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance. Plant Cell (2009) 1.98
The Arabidopsis TONNEAU2 gene encodes a putative novel protein phosphatase 2A regulatory subunit essential for the control of the cortical cytoskeleton. Plant Cell (2002) 1.80
Combined networks regulating seed maturation. Trends Plant Sci (2007) 1.79
Auxin controls Arabidopsis adventitious root initiation by regulating jasmonic acid homeostasis. Plant Cell (2012) 1.31
Interactions between sterol biosynthesis genes in embryonic development of Arabidopsis. Plant J (2002) 1.27
A collection of INDEL markers for map-based cloning in seven Arabidopsis accessions. J Exp Bot (2012) 1.26
A role for pectin de-methylesterification in a developmentally regulated growth acceleration in dark-grown Arabidopsis hypocotyls. New Phytol (2010) 1.23
Comprehensive screening of Arabidopsis mutants suggests the lysine histidine transporter 1 to be involved in plant uptake of amino acids. Plant Physiol (2007) 1.20
gurke and pasticcino3 mutants affected in embryo development are impaired in acetyl-CoA carboxylase. EMBO Rep (2004) 1.15
Pasticcino2 is a protein tyrosine phosphatase-like involved in cell proliferation and differentiation in Arabidopsis. Plant J (2002) 1.13
Proteomic analysis of different mutant genotypes of Arabidopsis led to the identification of 11 proteins correlating with adventitious root development. Plant Physiol (2005) 1.08
Comprehensive expression profiling of the pectin methylesterase gene family during silique development in Arabidopsis thaliana. Planta (2006) 1.08
Leaf fructose content is controlled by the vacuolar transporter SWEET17 in Arabidopsis. Curr Biol (2013) 1.05
Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray. BMC Genomics (2010) 1.04
The transcription factor BELLRINGER modulates phyllotaxis by regulating the expression of a pectin methylesterase in Arabidopsis. Development (2011) 1.02
Hormonal control of cell proliferation requires PASTICCINO genes. Plant Physiol (2003) 1.00
Leaf senescence is accompanied by an early disruption of the microtubule network in Arabidopsis. Plant Physiol (2010) 0.98
Identification of pectin methylesterase 3 as a basic pectin methylesterase isoform involved in adventitious rooting in Arabidopsis thaliana. New Phytol (2011) 0.97
Overexpression of the vacuolar sugar carrier AtSWEET16 modifies germination, growth, and stress tolerance in Arabidopsis. Plant Physiol (2013) 0.96
Auxin is a central player in the hormone cross-talks that control adventitious rooting. Physiol Plant (2014) 0.94
Major changes in the cell wall during silique development in Arabidopsis thaliana. Phytochemistry (2010) 0.93
Cell wall compositional modifications of Miscanthus ecotypes in response to cold acclimation. Phytochemistry (2012) 0.93
The AINTEGUMENTA LIKE1 homeotic transcription factor PtAIL1 controls the formation of adventitious root primordia in poplar. Plant Physiol (2012) 0.92
Symplastic connection is required for bud outgrowth following dormancy in potato (Solanum tuberosum L.) tubers. Plant Cell Environ (2007) 0.92
The plant-specific dof transcription factors family: new players involved in vascular system development and functioning in Arabidopsis. Front Plant Sci (2013) 0.91
Identification of new adventitious rooting mutants amongst suppressors of the Arabidopsis thaliana superroot2 mutation. J Exp Bot (2014) 0.88
The auxin-signaling pathway is required for the lateral root response of Arabidopsis to the rhizobacterium Phyllobacterium brassicacearum. Planta (2010) 0.88
Down-regulation of a single auxin efflux transport protein in tomato induces precocious fruit development. J Exp Bot (2012) 0.86
ABCG9, ABCG11 and ABCG14 ABC transporters are required for vascular development in Arabidopsis. Plant J (2013) 0.84
Identification of new gene expression regulators specifically expressed during plant seed maturation. J Exp Bot (2006) 0.84
Analysis of LuPME3, a pectin methylesterase from Linum usitatissimum, revealed a variability in PME proteolytic maturation. Plant Signal Behav (2012) 0.84
Gibberellins inhibit adventitious rooting in hybrid aspen and Arabidopsis by affecting auxin transport. Plant J (2014) 0.83
The non-DNA-binding bHLH transcription factor PRE3/bHLH135/ATBS1/TMO7 is involved in the regulation of light signaling pathway in Arabidopsis. Physiol Plant (2012) 0.83
PT-Flax (phenotyping and TILLinG of flax): development of a flax (Linum usitatissimum L.) mutant population and TILLinG platform for forward and reverse genetics. BMC Plant Biol (2013) 0.83
Unexpected effects of chitinases on the peach-potato aphid (Myzus persicae Sulzer) when delivered via transgenic potato plants (Solanum tuberosum Linné) and in vitro. Transgenic Res (2005) 0.82
Gene expression profiling: keys for investigating phloem functions. Trends Plant Sci (2008) 0.79
Chemical and histochemical analysis of 'Quatre Saisons Blanc Mousseux', a Moss Rose of the Rosa x damascena group. Ann Bot (2005) 0.78
Abscisic acid regulates pinoresinol-lariciresinol reductase gene expression and secoisolariciresinol accumulation in developing flax (Linum usitatissimum L.) seeds. Planta (2011) 0.76
Activity of a flax pectin methylesterase promoter in transgenic tobacco pollen. J Plant Physiol (2003) 0.76
Transgenic hybrid aspen trees with increased gibberellin (GA) concentrations suggest that GA acts in parallel with FLOWERING LOCUS T2 to control shoot elongation. New Phytol (2014) 0.75
Arabidopsis PME17 Activity can be Controlled by Pectin Methylesterase Inhibitor4. Plant Signal Behav (2015) 0.75