Published in Nucleic Acids Res on April 30, 2009
miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res (2010) 25.85
MicroRNA dysregulation in cancer: diagnostics, monitoring and therapeutics. A comprehensive review. EMBO Mol Med (2012) 5.46
Accurate microRNA target prediction correlates with protein repression levels. BMC Bioinformatics (2009) 3.21
Muscle stem cell behavior is modified by microRNA-27 regulation of Pax3 expression. Proc Natl Acad Sci U S A (2009) 2.28
Regulation of angiogenesis and choroidal neovascularization by members of microRNA-23~27~24 clusters. Proc Natl Acad Sci U S A (2011) 2.10
MicroRNA-221/222 confers breast cancer fulvestrant resistance by regulating multiple signaling pathways. Oncogene (2010) 1.97
A single-base substitution in the seed region of miR-184 causes EDICT syndrome. Invest Ophthalmol Vis Sci (2012) 1.95
MiRNA-miRNA synergistic network: construction via co-regulating functional modules and disease miRNA topological features. Nucleic Acids Res (2010) 1.94
NAViGaTing the micronome--using multiple microRNA prediction databases to identify signalling pathway-associated microRNAs. PLoS One (2011) 1.80
Canonical and alternate functions of the microRNA biogenesis machinery. Genes Dev (2010) 1.67
Circulating MiR-125b as a marker predicting chemoresistance in breast cancer. PLoS One (2012) 1.67
The microRNA cluster miR-106b~25 regulates adult neural stem/progenitor cell proliferation and neuronal differentiation. Aging (Albany NY) (2011) 1.65
A survey of small RNAs in human sperm. Hum Reprod (2011) 1.62
Editing of Epstein-Barr virus-encoded BART6 microRNAs controls their dicer targeting and consequently affects viral latency. J Biol Chem (2010) 1.59
MAGIA, a web-based tool for miRNA and Genes Integrated Analysis. Nucleic Acids Res (2010) 1.58
miRSystem: an integrated system for characterizing enriched functions and pathways of microRNA targets. PLoS One (2012) 1.54
A dictionary on microRNAs and their putative target pathways. Nucleic Acids Res (2010) 1.54
Differential expression of microRNAs during melanoma progression: miR-200c, miR-205 and miR-211 are downregulated in melanoma and act as tumour suppressors. Br J Cancer (2012) 1.54
DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association. Nucleic Acids Res (2011) 1.51
Identification of microRNA-regulated gene networks by expression analysis of target genes. Genome Res (2012) 1.51
MicroSNiPer: a web tool for prediction of SNP effects on putative microRNA targets. Hum Mutat (2010) 1.51
TAM: a method for enrichment and depletion analysis of a microRNA category in a list of microRNAs. BMC Bioinformatics (2010) 1.49
Got target? Computational methods for microRNA target prediction and their extension. Exp Mol Med (2010) 1.49
The DIANA-mirExTra web server: from gene expression data to microRNA function. PLoS One (2010) 1.44
TargetSpy: a supervised machine learning approach for microRNA target prediction. BMC Bioinformatics (2010) 1.43
MicroRNA expression profiles of human blood monocyte-derived dendritic cells and macrophages reveal miR-511 as putative positive regulator of Toll-like receptor 4. J Biol Chem (2011) 1.40
A human herpesvirus miRNA attenuates interferon signaling and contributes to maintenance of viral latency by targeting IKKε. Cell Res (2011) 1.40
Tissue elasticity regulated tumor gene expression: implication for diagnostic biomarkers of primitive neuroectodermal tumor. PLoS One (2015) 1.38
Downregulation of the mitochondrial calcium uniporter by cancer-related miR-25. Curr Biol (2012) 1.31
miRTar: an integrated system for identifying miRNA-target interactions in human. BMC Bioinformatics (2011) 1.30
The pro-apoptotic protein Bim is a microRNA target in kidney progenitors. J Am Soc Nephrol (2011) 1.27
MicroRNAs in ovarian carcinomas. Endocr Relat Cancer (2010) 1.25
MicroRNAs in common human diseases. Genomics Proteomics Bioinformatics (2012) 1.25
Stability, delivery and functions of human sperm RNAs at fertilization. Nucleic Acids Res (2013) 1.20
Androgen receptor splice variant AR3 promotes prostate cancer via modulating expression of autocrine/paracrine factors. J Biol Chem (2013) 1.18
Infection of Epstein-Barr virus in a gastric carcinoma cell line induces anchorage independence and global changes in gene expression. Proc Natl Acad Sci U S A (2012) 1.18
MicroRNA-24 regulates XIAP to reduce the apoptosis threshold in cancer cells. Oncogene (2012) 1.17
Coordinated regulation of extracellular matrix synthesis by the microRNA-29 family in the trabecular meshwork. Invest Ophthalmol Vis Sci (2011) 1.15
Insect microRNAs: biogenesis, expression profiling and biological functions. Insect Biochem Mol Biol (2012) 1.15
Comparative mRNA and microRNA expression profiling of three genitourinary cancers reveals common hallmarks and cancer-specific molecular events. PLoS One (2011) 1.15
p53-responsive miR-194 inhibits thrombospondin-1 and promotes angiogenesis in colon cancers. Cancer Res (2011) 1.14
Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs. RNA (2012) 1.13
Next Generation Sequencing of miRNAs - Strategies, Resources and Methods. Genes (Basel) (2010) 1.12
Comprehensive analysis of the functional microRNA-mRNA regulatory network identifies miRNA signatures associated with glioma malignant progression. Nucleic Acids Res (2013) 1.11
Integrated microRNA and mRNA expression profiling in a rat colon carcinogenesis model: effect of a chemo-protective diet. Physiol Genomics (2011) 1.10
Small RNA sequencing reveals microRNAs that modulate angiotensin II effects in vascular smooth muscle cells. J Biol Chem (2012) 1.09
Gene regulation mediated by microRNAs in response to green tea polyphenol EGCG in mouse lung cancer. BMC Genomics (2014) 1.08
MicroRNA regulation of the synaptic plasticity-related gene Arc. PLoS One (2012) 1.07
Regulation of cancer aggressive features in melanoma cells by microRNAs. PLoS One (2011) 1.07
Differential expression of microRNA-675, microRNA-139-3p and microRNA-335 in benign and malignant adrenocortical tumours. J Clin Pathol (2011) 1.07
MicroRNA binding site polymorphisms as biomarkers of cancer risk. Expert Rev Mol Diagn (2010) 1.06
Increased serum levels of circulating exosomal microRNA-373 in receptor-negative breast cancer patients. Oncotarget (2014) 1.05
A systems genetic analysis of alcohol drinking by mice, rats and men: influence of brain GABAergic transmission. Neuropharmacology (2010) 1.05
A miR-200b/200c/429-binding site polymorphism in the 3' untranslated region of the AP-2α gene is associated with cisplatin resistance. PLoS One (2011) 1.05
The expression levels of microRNA-361-5p and its target VEGFA are inversely correlated in human cutaneous squamous cell carcinoma. PLoS One (2012) 1.04
MicroRNA-153 physiologically inhibits expression of amyloid-β precursor protein in cultured human fetal brain cells and is dysregulated in a subset of Alzheimer disease patients. J Biol Chem (2012) 1.03
MicroRNAs as Haematopoiesis Regulators. Adv Hematol (2013) 1.03
Systems biology approach to identify transcriptome reprogramming and candidate microRNA targets during the progression of polycystic kidney disease. BMC Syst Biol (2011) 1.02
Changes in hypothalamic expression of the Lin28/let-7 system and related microRNAs during postnatal maturation and after experimental manipulations of puberty. Endocrinology (2013) 1.02
Bioinformatic tools for microRNA dissection. Nucleic Acids Res (2015) 1.02
14q32-encoded microRNAs mediate an oligometastatic phenotype. Oncotarget (2015) 1.02
Expression of miR-34c induces G2/M cell cycle arrest in breast cancer cells. BMC Cancer (2014) 1.01
An Oct4-Sall4-Nanog network controls developmental progression in the pre-implantation mouse embryo. Mol Syst Biol (2013) 1.01
Walking the interactome to identify human miRNA-disease associations through the functional link between miRNA targets and disease genes. BMC Syst Biol (2013) 1.01
Retracted A cardiac-enriched microRNA, miR-378, blocks cardiac hypertrophy by targeting Ras signaling. J Biol Chem (2013) 1.00
A genome-wide miRNA screen revealed miR-603 as a MGMT-regulating miRNA in glioblastomas. Oncotarget (2014) 0.99
Advances in microRNA experimental approaches to study physiological regulation of gene products implicated in CNS disorders. Exp Neurol (2012) 0.99
Dysregulation of miR-34a links neuronal development to genetic risk factors for bipolar disorder. Mol Psychiatry (2015) 0.99
A novel FADS1 isoform potentiates FADS2-mediated production of eicosanoid precursor fatty acids. J Lipid Res (2012) 0.97
Advances in the techniques for the prediction of microRNA targets. Int J Mol Sci (2013) 0.97
A least angle regression model for the prediction of canonical and non-canonical miRNA-mRNA interactions. PLoS One (2012) 0.97
Molecular basis of differential target regulation by miR-96 and miR-182: the Glypican-3 as a model. Nucleic Acids Res (2011) 0.97
Computational prediction of intronic microRNA targets using host gene expression reveals novel regulatory mechanisms. PLoS One (2011) 0.96
Major regulators of microRNAs biogenesis Dicer and Drosha are down-regulated in endometrial cancer. Tumour Biol (2011) 0.96
Computational methods for the identification of microRNA targets. Open Access Bioinformatics (2010) 0.96
Identification of microRNAs involved in the host response to enterovirus 71 infection by a deep sequencing approach. J Biomed Biotechnol (2010) 0.96
Gene autoregulation via intronic microRNAs and its functions. BMC Syst Biol (2012) 0.96
miR-210: fine-tuning the hypoxic response. Adv Exp Med Biol (2014) 0.95
A study of miRNAs targets prediction and experimental validation. Protein Cell (2010) 0.95
Identification of microRNA activity by Targets' Reverse EXpression. Bioinformatics (2009) 0.95
MicroRNA-339-5p down-regulates protein expression of β-site amyloid precursor protein-cleaving enzyme 1 (BACE1) in human primary brain cultures and is reduced in brain tissue specimens of Alzheimer disease subjects. J Biol Chem (2013) 0.93
The proto-oncogene KRAS is targeted by miR-200c. Oncotarget (2014) 0.93
mrSNP: software to detect SNP effects on microRNA binding. BMC Bioinformatics (2014) 0.92
MiR-338-3p inhibits hepatocarcinoma cells and sensitizes these cells to sorafenib by targeting hypoxia-induced factor 1α. PLoS One (2014) 0.92
Interplay between the oxidoreductase PDIA6 and microRNA-322 controls the response to disrupted endoplasmic reticulum calcium homeostasis. Sci Signal (2014) 0.91
Genome-wide identification of translationally inhibited and degraded miR-155 targets using RNA-interacting protein-IP. RNA Biol (2013) 0.91
Bone morphogenetic protein signalling activity distinguishes histological subsets of paediatric germ cell tumours. Int J Androl (2011) 0.91
Alternative polyadenylation and miR-34 family members regulate tau expression. J Neurochem (2013) 0.91
MultiMiTar: a novel multi objective optimization based miRNA-target prediction method. PLoS One (2011) 0.91
A systematic analysis on DNA methylation and the expression of both mRNA and microRNA in bladder cancer. PLoS One (2011) 0.91
Identification of microRNAs inhibiting TGF-β-induced IL-11 production in bone metastatic breast cancer cells. PLoS One (2012) 0.91
Systematic identification of transcriptional and post-transcriptional regulations in human respiratory epithelial cells during influenza A virus infection. BMC Bioinformatics (2014) 0.91
Toward a combinatorial nature of microRNA regulation in human cells. Nucleic Acids Res (2012) 0.90
Looking at Kaposi's Sarcoma-Associated Herpesvirus-Host Interactions from a microRNA Viewpoint. Front Microbiol (2012) 0.90
Mechanical stress induces pre-B-cell colony-enhancing factor/NAMPT expression via epigenetic regulation by miR-374a and miR-568 in human lung endothelium. Am J Respir Cell Mol Biol (2014) 0.90
Integrated miRNA and mRNA expression profiling to identify mRNA targets of dysregulated miRNAs in non-obstructive azoospermia. Sci Rep (2015) 0.89
miRNA expression profile analysis in kidney of different porcine breeds. PLoS One (2013) 0.89
Aberrant plasma levels of circulating miR-16, miR-107, miR-130a and miR-146a are associated with lymph node metastasis and receptor status of breast cancer patients. Oncotarget (2015) 0.89
miR-221 affects multiple cancer pathways by modulating the level of hundreds messenger RNAs. Front Genet (2013) 0.89
A Bayesian decision fusion approach for microRNA target prediction. BMC Genomics (2012) 0.88
MicroRNAs: genomics, biogenesis, mechanism, and function. Cell (2004) 198.59
KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res (2000) 117.00
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell (2005) 96.87
The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell (1993) 64.62
MicroRNA targeting specificity in mammals: determinants beyond seed pairing. Mol Cell (2007) 38.42
Widespread changes in protein synthesis induced by microRNAs. Nature (2008) 31.44
Principles of microRNA-target recognition. PLoS Biol (2005) 23.70
The role of site accessibility in microRNA target recognition. Nat Genet (2007) 18.52
A genome-wide map of conserved microRNA targets in C. elegans. Curr Biol (2006) 10.14
Potent effect of target structure on microRNA function. Nat Struct Mol Biol (2007) 8.92
Redirection of silencing targets by adenosine-to-inosine editing of miRNAs. Science (2007) 7.15
A guide through present computational approaches for the identification of mammalian microRNA targets. Nat Methods (2006) 7.00
Inference of miRNA targets using evolutionary conservation and pathway analysis. BMC Bioinformatics (2007) 6.21
The database of experimentally supported targets: a functional update of TarBase. Nucleic Acids Res (2008) 5.65
Eukaryotic promoter recognition. Genome Res (1997) 3.85
Retracted Anti-apoptotic function of a microRNA encoded by the HSV-1 latency-associated transcript. Nature (2006) 3.47
DIANA-mirPath: Integrating human and mouse microRNAs in pathways. Bioinformatics (2009) 3.05
DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows. Nucleic Acids Res (2013) 2.32
Bacterial start site prediction. Nucleic Acids Res (1999) 1.87
Experience with infliximab (anti-TNF alpha monoclonal antibody) as monotherapy for giant cell arteritis. Ann Rheum Dis (2003) 1.56
Safety of myocardial flash-contrast echocardiography in combination with dobutamine stress testing for the detection of ischaemia in 5250 studies. Heart (2008) 1.49
DIANA-EST: a statistical analysis. Bioinformatics (2001) 1.21
CLimate Impacts on Myocardial infarction deaths in the Athens TErritory: the CLIMATE study. Heart (2006) 1.20
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Variations in the levels of cytoplasmic glucocorticoid receptors in lungs of various species at different developmental stages. Endocrinology (1974) 0.97
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Cortisol receptors in rabbit fetal lung. Biochem Biophys Res Commun (1972) 0.94
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Phytosterols supplementation decreases plasma small and dense LDL levels in metabolic syndrome patients on a westernized type diet. Nutr Metab Cardiovasc Dis (2011) 0.92
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Corticosteroid levels in the mother and fetus of the rabbit during gestation. Endocrinology (1973) 0.87
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Glucocorticoid receptors in fetal and adult rabbit tissues. J Biol Chem (1974) 0.83
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Hormonal regulation of beta-adrenergic receptors in fetal rabbit lung in organ culture. Life Sci (1982) 0.83
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Unoccupied and occupied estrogen receptors in myometrial cytosol and nuclei from nonpregnant and pregnant women. J Clin Endocrinol Metab (1980) 0.83
Glucocorticoid receptors in lung. I. Specific binding of glucocorticoids to cytoplasmic components of rabbit fetal lung. J Biol Chem (1973) 0.82
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Anti-apoptotic function of a microRNA encoded by the HSV-1 latency-associated transcript. Nature (2008) 0.81
Complex stenosis morphology and vasomotor responses to inhibition of nitric oxide synthesis. Heart (2000) 0.81
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Septic myositis in a chronic dialysis patient. Clin Nephrol (2001) 0.80
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Gene expression profiles of breast cancer obtained from core cut biopsies before neoadjuvant docetaxel, adriamycin, and cyclophoshamide chemotherapy correlate with routine prognostic markers and could be used to identify predictive signatures. Zentralbl Gynakol (2006) 0.78
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Cytoplasmic and nuclear progestin receptors in human myometrium during the menstrual cycle and in pregnancy at term. J Clin Endocrinol Metab (1979) 0.76
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Uptake and metabolism of cortisone and cortisol by the fetal rabbit lung. Steroids (1974) 0.75
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Binding of glucocorticoids to liver nuclei and chromatin of fetal, immature and adult rats. Steroids (1977) 0.75
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Binding of testosterone to cytoplasmic components of the immature rat uterus. Biochem Biophys Res Commun (1971) 0.75