Published in Chromosome Res on January 01, 2009
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Identification of shared single copy nuclear genes in Arabidopsis, Populus, Vitis and Oryza and their phylogenetic utility across various taxonomic levels. BMC Evol Biol (2010) 2.50
The collapse of gene complement following whole genome duplication. BMC Genomics (2010) 1.98
An atlas of over 90,000 conserved noncoding sequences provides insight into crucifer regulatory regions. Nat Genet (2013) 1.68
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Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity. Genome Biol Evol (2010) 1.53
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Understanding Brassicaceae evolution through ancestral genome reconstruction. Genome Biol (2015) 1.44
Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies. BMC Genomics (2012) 1.43
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Subcellular Relocalization and Positive Selection Play Key Roles in the Retention of Duplicate Genes of Populus Class III Peroxidase Family. Plant Cell (2014) 1.10
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Transcriptome-wide profiling and expression analysis of transcription factor families in a liverwort, Marchantia polymorpha. BMC Genomics (2013) 0.86
Comparative mapping between Coho Salmon (Oncorhynchus kisutch) and three other salmonids suggests a role for chromosomal rearrangements in the retention of duplicated regions following a whole genome duplication event. G3 (Bethesda) (2014) 0.85
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Gene Duplicability of Core Genes Is Highly Consistent across All Angiosperms. Plant Cell (2016) 0.84
Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean. Plant Cell (2015) 0.83
Nonrandom survival of gene conversions among yeast ribosomal proteins duplicated through genome doubling. Genome Biol Evol (2010) 0.83
Identification, characterization, and utilization of single copy genes in 29 angiosperm genomes. BMC Genomics (2014) 0.83
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Unusual tandem expansion and positive selection in subgroups of the plant GRAS transcription factor superfamily. BMC Plant Biol (2014) 0.82
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Functional innovations of three chronological mesohexaploid Brassica rapa genomes. BMC Genomics (2014) 0.81
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Rapid reorganization of the transcriptional regulatory network after genome duplication in yeast. Proc Biol Sci (2009) 0.81
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Large scale of human duplicate genes divergence. J Mol Evol (2012) 0.80
Evolution by gene duplication of Medicago truncatula PISTILLATA-like transcription factors. J Exp Bot (2016) 0.80
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Gene divergence of homeologous regions associated with a major seed protein content QTL in soybean. Front Plant Sci (2013) 0.79
Molecular evolution, characterization, and expression analysis of SnRK2 gene family in Pak-choi (Brassica rapa ssp. chinensis). Front Plant Sci (2015) 0.79
Evolution of herbivore-induced early defense signaling was shaped by genome-wide duplications in Nicotiana. Elife (2016) 0.79
argC Orthologs from Rhizobiales show diverse profiles of transcriptional efficiency and functionality in Sinorhizobium meliloti. J Bacteriol (2010) 0.78
Transcriptional robustness and protein interactions are associated in yeast. BMC Syst Biol (2011) 0.78
Large-Scale Evolutionary Analysis of Genes and Supergene Clusters from Terpenoid Modular Pathways Provides Insights into Metabolic Diversification in Flowering Plants. PLoS One (2015) 0.78
Comparative mapping, genomic structure, and expression analysis of eight pseudo-response regulator genes in Brassica rapa. Mol Genet Genomics (2012) 0.77
Key Role of Amino Acid Repeat Expansions in the Functional Diversification of Duplicated Transcription Factors. Mol Biol Evol (2015) 0.77
Molecular cloning, functional characterization, and evolutionary analysis of vitamin D receptors isolated from basal vertebrates. PLoS One (2015) 0.77
Elucidating the evolutionary history and expression patterns of nucleoside phosphorylase paralogs (vegetative storage proteins) in Populus and the plant kingdom. BMC Plant Biol (2013) 0.77
Transcription factors in microalgae: genome-wide prediction and comparative analysis. BMC Genomics (2016) 0.77
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Functional diversification of vitamin D receptor paralogs in teleost fish after a whole genome duplication event. Endocrinology (2014) 0.77
Patterns of Gene Conversion in Duplicated Yeast Histones Suggest Strong Selection on a Coadapted Macromolecular Complex. Genome Biol Evol (2015) 0.77
Patterns of evolutionary conservation of ascorbic acid-related genes following whole-genome triplication in Brassica rapa. Genome Biol Evol (2014) 0.77
The Y-segment of novel cold dehydrin genes is conserved and codons in the PR-10 genes are under positive selection in Oxytropis (Fabaceae) from contrasting climates. Mol Genet Genomics (2011) 0.76
Phylogenetic and Evolutionary Analyses of the Frizzled Gene Family in Common Carp (Cyprinus carpio) Provide Insights into Gene Expansion from Whole-Genome Duplications. PLoS One (2015) 0.76
Gene duplication and the environmental regulation of physiology and development. Ecol Evol (2014) 0.76
Conserved Non-Coding Sequences are Associated with Rates of mRNA Decay in Arabidopsis. Front Plant Sci (2013) 0.76
The house spider genome reveals an ancient whole-genome duplication during arachnid evolution. BMC Biol (2017) 0.76
Conservation and Expression Patterns Divergence of Ascorbic Acid d-mannose/l-galactose Pathway Genes in Brassica rapa. Front Plant Sci (2016) 0.75
Both mechanism and age of duplications contribute to biased gene retention patterns in plants. BMC Genomics (2017) 0.75
A Recent Whole-Genome Duplication Divides Populations of a Globally Distributed Microsporidian. Mol Biol Evol (2016) 0.75
De novo hybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species. Sci Rep (2017) 0.75
Genomic, Molecular Evolution, and Expression Analysis of Genes Encoding Putative Classical AGPs, Lysine-Rich AGPs, and AG Peptides in Brassica rapa. Front Plant Sci (2017) 0.75
Evolutionary Fates and Dynamic Functionalization of Young Duplicate Genes in Arabidopsis Genomes. Plant Physiol (2016) 0.75
Comprehensive Analysis of the CDPK-SnRK Superfamily Genes in Chinese Cabbage and Its Evolutionary Implications in Plants. Front Plant Sci (2017) 0.75
Compensatory Drift and the Evolutionary Dynamics of Dosage-Sensitive Duplicate Genes. Genetics (2015) 0.75
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Evolution history of duplicated smad3 genes in teleost: insights from Japanese flounder, Paralichthys olivaceus. PeerJ (2016) 0.75
Comparative genomic analysis of duplicated homoeologous regions involved in the resistance of Brassica napus to stem canker. Front Plant Sci (2015) 0.75
Evaluating and Characterizing Ancient Whole-Genome Duplications in Plants with Gene Count Data. Genome Biol Evol (2016) 0.75
Retention, Molecular Evolution, and Expression Divergence of the Auxin/Indole Acetic Acid and Auxin Response Factor Gene Families in Brassica Rapa Shed Light on Their Evolution Patterns in Plants. Genome Biol Evol (2015) 0.75
MicroRNA and Transcription Factor: Key Players in Plant Regulatory Network. Front Plant Sci (2017) 0.75
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