Published in Mol Biol Evol on January 28, 2010
Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Genome Biol (2016) 1.44
Relaxed selection is a precursor to the evolution of phenotypic plasticity. Proc Natl Acad Sci U S A (2011) 1.38
Transcriptome analyses of primitively eusocial wasps reveal novel insights into the evolution of sociality and the origin of alternative phenotypes. Genome Biol (2013) 1.18
Population genomics of the honey bee reveals strong signatures of positive selection on worker traits. Proc Natl Acad Sci U S A (2014) 1.17
Molecular evolutionary analyses of insect societies. Proc Natl Acad Sci U S A (2011) 1.10
Taxonomically restricted genes are associated with the evolution of sociality in the honey bee. BMC Genomics (2011) 1.06
The sociobiology of molecular systems. Nat Rev Genet (2011) 1.00
Genes associated with ant social behavior show distinct transcriptional and evolutionary patterns. Elife (2015) 0.92
Relaxed genetic constraint is ancestral to the evolution of phenotypic plasticity. Integr Comp Biol (2012) 0.91
Genome composition, caste, and molecular evolution in eusocial insects. Proc Natl Acad Sci U S A (2013) 0.90
Detecting the molecular signature of social conflict: theory and a test with bacterial quorum sensing genes. Am Nat (2012) 0.87
Accelerated evolution of morph-biased genes in pea aphids. Mol Biol Evol (2014) 0.85
Kin selection, genomics and caste-antagonistic pleiotropy. Biol Lett (2013) 0.85
Neutral and adaptive explanations for an association between caste-biased gene expression and rate of sequence evolution. Front Genet (2014) 0.78
Epigenetics as an answer to Darwin's "special difficulty," Part 2: natural selection of metastable epialleles in honeybee castes. Front Genet (2015) 0.77
Accelerated Evolution of Developmentally Biased Genes in the Tetraphenic Ant Cardiocondyla obscurior. Mol Biol Evol (2017) 0.75
Trends in genome dynamics among major orders of insects revealed through variations in protein families. BMC Genomics (2015) 0.75
Genomic signature of kin selection in an ant with obligately sterile workers. Mol Biol Evol (2017) 0.75
Reply to Hunt et al.: Worker-biased genes have high guanine–cytosine content and rates of nucleotide diversity in the honey bee. Proc Natl Acad Sci U S A (2013) 0.75
Caste-biased gene expression in a facultatively eusocial bee suggests a role for genetic accommodation in the evolution of eusociality. Proc Biol Sci (2017) 0.75
Migration control: a distance compensation strategy in ants. Naturwissenschaften (2016) 0.75
Initial sequencing and comparative analysis of the mouse genome. Nature (2002) 96.15
The genome sequence of the malaria mosquito Anopheles gambiae. Science (2002) 20.36
Genome sequence of Aedes aegypti, a major arbovirus vector. Science (2007) 9.19
The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science (2009) 8.23
The ecoresponsive genome of Daphnia pulex. Science (2011) 6.55
The genome of the model beetle and pest Tribolium castaneum. Nature (2008) 6.50
The Newick utilities: high-throughput phylogenetic tree processing in the UNIX shell. Bioinformatics (2010) 6.42
How many species are infected with Wolbachia?--A statistical analysis of current data. FEMS Microbiol Lett (2008) 5.63
Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Science (2010) 5.56
Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes. Science (2007) 4.65
Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes. Science (2007) 4.03
Integration of microRNA miR-122 in hepatic circadian gene expression. Genes Dev (2009) 3.64
Multilocus sequence typing system for the endosymbiont Wolbachia pipientis. Appl Environ Microbiol (2006) 3.45
The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature (2011) 3.29
Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics. Science (2010) 3.18
VectorBase: a home for invertebrate vectors of human pathogens. Nucleic Acids Res (2006) 2.94
DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera. Proc Natl Acad Sci U S A (2009) 2.77
Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle. Proc Natl Acad Sci U S A (2010) 2.76
The genome of the fire ant Solenopsis invicta. Proc Natl Acad Sci U S A (2011) 2.74
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs. Nucleic Acids Res (2012) 2.68
Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects. Genome Res (2006) 2.42
Inclusive fitness theory and eusociality. Nature (2011) 2.31
Comparative architectures of mammalian and chicken genomes reveal highly variable rates of genomic rearrangements across different lineages. Genome Res (2004) 2.17
On the presence and role of human gene-body DNA methylation. Oncotarget (2012) 2.10
Genome evolution reveals biochemical networks and functional modules. Proc Natl Acad Sci U S A (2003) 2.08
Evolution and diversity of Rickettsia bacteria. BMC Biol (2009) 2.04
OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011. Nucleic Acids Res (2010) 2.02
New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features. BMC Genomics (2007) 1.97
OrthoDB: the hierarchical catalog of eukaryotic orthologs. Nucleic Acids Res (2007) 1.91
Widespread recombination throughout Wolbachia genomes. Mol Biol Evol (2005) 1.83
The bovine lactation genome: insights into the evolution of mammalian milk. Genome Biol (2009) 1.77
Variable molecular clocks in hominoids. Proc Natl Acad Sci U S A (2006) 1.66
The distribution of Wolbachia in fig wasps: correlations with host phylogeny, ecology and population structure. Proc Biol Sci (2002) 1.60
Understanding relationship between sequence and functional evolution in yeast proteins. Genetica (2006) 1.60
miROrtho: computational survey of microRNA genes. Nucleic Acids Res (2008) 1.60
AnoEST: toward A. gambiae functional genomics. Genome Res (2005) 1.58
Pathogenomics of Culex quinquefasciatus and meta-analysis of infection responses to diverse pathogens. Science (2010) 1.58
Heterogeneous genomic molecular clocks in primates. PLoS Genet (2006) 1.55
Rapidly evolving mitochondrial genome and directional selection in mitochondrial genes in the parasitic wasp nasonia (hymenoptera: pteromalidae). Mol Biol Evol (2008) 1.55
The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes. Genome Biol (2013) 1.52
DNA methylation in insects: on the brink of the epigenomic era. Insect Mol Biol (2011) 1.51
Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids. Genome Biol (2008) 1.49
DNA methylation and structural and functional bimodality of vertebrate promoters. Mol Biol Evol (2008) 1.49
Finding the missing honey bee genes: lessons learned from a genome upgrade. BMC Genomics (2014) 1.46
Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality. Genome Res (2013) 1.45
Revisiting Wolbachia supergroup typing based on WSP: spurious lineages and discordance with MLST. Curr Microbiol (2007) 1.44
Mosaic nature of the wolbachia surface protein. J Bacteriol (2005) 1.44
Non-coding changes cause sex-specific wing size differences between closely related species of Nasonia. PLoS Genet (2010) 1.41
Modes of acquisition of Wolbachia: horizontal transfer, hybrid introgression, and codivergence in the Nasonia species complex. Evolution (2008) 1.40
Relaxed selection is a precursor to the evolution of phenotypic plasticity. Proc Natl Acad Sci U S A (2011) 1.38
Sertoli cell Dicer is essential for spermatogenesis in mice. Dev Biol (2008) 1.37
Mutations of different molecular origins exhibit contrasting patterns of regional substitution rate variation. PLoS Comput Biol (2008) 1.35
Specialization and geographic isolation among Wolbachia symbionts from ants and lycaenid butterflies. Evolution (2008) 1.32
Recombination and its impact on the genome of the haplodiploid parasitoid wasp Nasonia. PLoS One (2010) 1.31
Divergent whole-genome methylation maps of human and chimpanzee brains reveal epigenetic basis of human regulatory evolution. Am J Hum Genet (2012) 1.31
Quantification of ortholog losses in insects and vertebrates. Genome Biol (2007) 1.29
Correlated asymmetry of sequence and functional divergence between duplicate proteins of Saccharomyces cerevisiae. Mol Biol Evol (2006) 1.28
MiRmap: comprehensive prediction of microRNA target repression strength. Nucleic Acids Res (2012) 1.27
Insight into the routes of Wolbachia invasion: high levels of horizontal transfer in the spider genus Agelenopsis revealed by Wolbachia strain and mitochondrial DNA diversity. Mol Ecol (2007) 1.26
Influence of antibiotic treatment and Wolbachia curing on sexual isolation among Drosophila melanogaster cage populations. Evolution (2006) 1.25
Toward a Wolbachia multilocus sequence typing system: discrimination of Wolbachia strains present in Drosophila species. Curr Microbiol (2006) 1.24
Functional conservation of DNA methylation in the pea aphid and the honeybee. Genome Biol Evol (2010) 1.21
The cis-acting replication elements define human enterovirus and rhinovirus species. RNA (2008) 1.21
Rhinovirus genome evolution during experimental human infection. PLoS One (2010) 1.21
Comparative analyses of DNA methylation and sequence evolution using Nasonia genomes. Mol Biol Evol (2011) 1.20
Evolution of shape by multiple regulatory changes to a growth gene. Science (2012) 1.19
The effect of Wolbachia versus genetic incompatibilities on reinforcement and speciation. Evolution (2005) 1.18
The evolution of invertebrate gene body methylation. Mol Biol Evol (2012) 1.18
Silencing of c-Fos expression by microRNA-155 is critical for dendritic cell maturation and function. Blood (2011) 1.16
Computational and transcriptional evidence for microRNAs in the honey bee genome. Genome Biol (2007) 1.15
Function and evolution of DNA methylation in Nasonia vitripennis. PLoS Genet (2013) 1.14
Parasitism and mutualism in Wolbachia: what the phylogenomic trees can and cannot say. Mol Biol Evol (2008) 1.14
Doubts about complex speciation between humans and chimpanzees. Trends Ecol Evol (2009) 1.10
DNA methylation and transcriptional noise. Epigenetics Chromatin (2013) 1.09
Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi. Genome Biol Evol (2010) 1.07
Computational approaches for understanding the evolution of DNA methylation in animals. Epigenetics (2009) 1.04
Gene expression and the evolution of phenotypic diversity in social wasps. BMC Biol (2007) 1.04