Published in Oncotarget on April 01, 2012
Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array. Epigenetics Chromatin (2013) 2.93
Global analysis of DNA methylation variation in adipose tissue from twins reveals links to disease-associated variants in distal regulatory elements. Am J Hum Genet (2013) 2.40
DNA methylome profiling of human tissues identifies global and tissue-specific methylation patterns. Genome Biol (2014) 2.02
Genome-wide DNA methylation analysis of human pancreatic islets from type 2 diabetic and non-diabetic donors identifies candidate genes that influence insulin secretion. PLoS Genet (2014) 1.94
Characterization of the cartilage DNA methylome in knee and hip osteoarthritis. Arthritis Rheumatol (2014) 1.77
Cigarette smoking and DNA methylation. Front Genet (2013) 1.48
The interaction of genetic variants and DNA methylation of the interleukin-4 receptor gene increase the risk of asthma at age 18 years. Clin Epigenetics (2013) 1.22
Long-range epigenetic regulation is conferred by genetic variation located at thousands of independent loci. Nat Commun (2015) 1.18
Flow-dependent epigenetic DNA methylation regulates endothelial gene expression and atherosclerosis. J Clin Invest (2014) 1.18
Differential DNA methylation in discrete developmental stages of the parasitic nematode Trichinella spiralis. Genome Biol (2012) 1.16
DNA methylation data analysis and its application to cancer research. Epigenomics (2013) 1.14
DNA methylation and transcriptional noise. Epigenetics Chromatin (2013) 1.09
Imputation and subset-based association analysis across different cancer types identifies multiple independent risk loci in the TERT-CLPTM1L region on chromosome 5p15.33. Hum Mol Genet (2014) 1.09
Genome-wide associations between genetic and epigenetic variation influence mRNA expression and insulin secretion in human pancreatic islets. PLoS Genet (2014) 1.06
Mapping the zebrafish brain methylome using reduced representation bisulfite sequencing. Epigenetics (2013) 1.02
Predominant intragenic methylation is associated with gene expression characteristics in a bivalve mollusc. PeerJ (2013) 1.02
Epigenetic mechanisms and models in the origins of asthma. Curr Opin Allergy Clin Immunol (2013) 1.02
Genome-wide bisulfite sequencing in zygotes identifies demethylation targets and maps the contribution of TET3 oxidation. Cell Rep (2014) 1.00
Epigenetics and the developmental origins of inflammatory bowel diseases. Can J Gastroenterol (2012) 0.97
Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects. Genome Biol Evol (2013) 0.96
DNMT inhibitors reverse a specific signature of aberrant promoter DNA methylation and associated gene silencing in AML. Genome Biol (2014) 0.95
Cross-species analysis of genic GC3 content and DNA methylation patterns. Genome Biol Evol (2013) 0.94
Genome-wide analysis of DNA methylation in bovine placentas. BMC Genomics (2014) 0.94
miR-26a and miR-214 down-regulate expression of the PTEN gene in chronic lymphocytic leukemia, but not PTEN mutation or promoter methylation. Oncotarget (2015) 0.93
Genome-wide DNA methylation profiles and their relationships with mRNA and the microRNA transcriptome in bovine muscle tissue (Bos taurine). Sci Rep (2014) 0.93
Leishmania donovani infection causes distinct epigenetic DNA methylation changes in host macrophages. PLoS Pathog (2014) 0.92
Epigenetic changes: a common theme in acute myelogenous leukemogenesis. J Hematol Oncol (2013) 0.92
Mammalian-wide interspersed repeat (MIR)-derived enhancers and the regulation of human gene expression. Mob DNA (2014) 0.91
GCK gene-body hypomethylation is associated with the risk of coronary heart disease. Biomed Res Int (2014) 0.89
Maternal Diet during Pregnancy Induces Gene Expression and DNA Methylation Changes in Fetal Tissues in Sheep. Front Genet (2013) 0.87
DNA methylation functions as a critical regulator of Kir4.1 expression during CNS development. Glia (2014) 0.87
A novel reannotation strategy for dissecting DNA methylation patterns of human long intergenic non-coding RNAs in cancers. Nucleic Acids Res (2014) 0.87
DNA methylation and evolution of duplicate genes. Proc Natl Acad Sci U S A (2014) 0.85
Genome-wide DNA methylation profiling in rheumatoid arthritis identifies disease-associated methylation changes that are distinct to individual T- and B-lymphocyte populations. Epigenetics (2014) 0.84
High-density array analysis of DNA methylation in Tamoxifen-resistant breast cancer cell lines. Epigenetics (2013) 0.84
Simultaneous profiling of transcriptome and DNA methylome from a single cell. Genome Biol (2016) 0.84
Genome-wide DNA methylation map of human neutrophils reveals widespread inter-individual epigenetic variation. Sci Rep (2015) 0.84
Genetic and epigenetic variants contributing to clofarabine cytotoxicity. Hum Mol Genet (2013) 0.84
Analysis of DNA methylation patterns associated with the gastric cancer genome. Oncol Lett (2014) 0.84
Clinically relevant genes and regulatory pathways associated with NRASQ61 mutations in melanoma through an integrative genomics approach. Oncotarget (2015) 0.83
DNA demethylation by 5-aza-2'-deoxycytidine is imprinted, targeted to euchromatin, and has limited transcriptional consequences. Epigenetics Chromatin (2015) 0.83
DNA demethylation and invasive cancer: implications for therapeutics. Br J Pharmacol (2015) 0.83
The interplay of DNA methylation over time with Th2 pathway genetic variants on asthma risk and temporal asthma transition. Clin Epigenetics (2014) 0.83
Variable promoter methylation contributes to differential expression of key genes in human placenta-derived venous and arterial endothelial cells. BMC Genomics (2013) 0.82
Knockdown of CDKN1C (p57(kip2)) and PHLDA2 results in developmental changes in bovine pre-implantation embryos. PLoS One (2013) 0.81
Methylation and gene expression responses to ethanol feeding and betaine supplementation in the cystathionine beta synthase-deficient mouse. Alcohol Clin Exp Res (2014) 0.80
Developmental regulation and induction of cytochrome P450 2W1, an enzyme expressed in colon tumors. PLoS One (2015) 0.80
Evolutionary Transition of Promoter and Gene Body DNA Methylation across Invertebrate-Vertebrate Boundary. Mol Biol Evol (2015) 0.80
DNA co-methylation modules in postmortem prefrontal cortex tissues of European Australians with alcohol use disorders. Sci Rep (2016) 0.79
Genome-wide DNA methylation analyses in the brain reveal four differentially methylated regions between humans and non-human primates. BMC Evol Biol (2012) 0.79
Global DNA methylation changes and differential gene expression in Anaplasma phagocytophilum-infected human neutrophils. Clin Epigenetics (2015) 0.79
Epigenetics and Preeclampsia: Defining Functional Epimutations in the Preeclamptic Placenta Related to the TGF-β Pathway. PLoS One (2015) 0.79
Altered histone mark deposition and DNA methylation at homeobox genes in human oral squamous cell carcinoma. J Cell Physiol (2014) 0.79
Global DNA Methylation patterns on marsupial and devil facial tumour chromosomes. Mol Cytogenet (2015) 0.79
Pharmacokinetic and Pharmacodynamic Responses to Clopidogrel: Evidences and Perspectives. Int J Environ Res Public Health (2017) 0.78
SETD2: an epigenetic modifier with tumor suppressor functionality. Oncotarget (2016) 0.78
Towards understanding the breast cancer epigenome: a comparison of genome-wide DNA methylation and gene expression data. Oncotarget (2016) 0.78
DNA Methylation Levels of Melanoma Risk Genes Are Associated with Clinical Characteristics of Melanoma Patients. Biomed Res Int (2015) 0.77
Genome-wide DNA methylome variation in two genetically distinct chicken lines using MethylC-seq. BMC Genomics (2015) 0.77
Paternal heat exposure causes DNA methylation and gene expression changes of Stat3 in Wild guinea pig sons. Ecol Evol (2016) 0.77
Methylome-wide Sequencing Detects DNA Hypermethylation Distinguishing Indolent from Aggressive Prostate Cancer. Cell Rep (2015) 0.77
Flow-Dependent Epigenetic DNA Methylation in Endothelial Gene Expression and Atherosclerosis. Arterioscler Thromb Vasc Biol (2015) 0.77
Impacts of Chromatin States and Long-Range Genomic Segments on Aging and DNA Methylation. PLoS One (2015) 0.77
The role of epigenetics in the endothelial cell shear stress response and atherosclerosis. Int J Biochem Cell Biol (2015) 0.77
Potential of adipose-derived stem cells in muscular regenerative therapies. Front Aging Neurosci (2015) 0.77
Damage-inducible intragenic demethylation of the human TP53 tumor suppressor gene is associated with transcription from an alternative intronic promoter. Mol Carcinog (2015) 0.77
Dietary restriction protects from age-associated DNA methylation and induces epigenetic reprogramming of lipid metabolism. Genome Biol (2017) 0.76
Hidden among the crowd: differential DNA methylation-expression correlations in cancer occur at important oncogenic pathways. Front Genet (2015) 0.76
Association of 5-hydroxymethylation and 5-methylation of DNA cytosine with tissue-specific gene expression. Epigenetics (2016) 0.76
Decreased expression and DNA methylation levels of GATAD1 in preeclamptic placentas. Cell Signal (2014) 0.76
Mapping Human Pluripotent-to-Cardiomyocyte Differentiation: Methylomes, Transcriptomes, and Exon DNA Methylation "Memories". EBioMedicine (2016) 0.76
Genome-wide DNA methylation identifies trophoblast invasion-related genes: Claudin-4 and Fucosyltransferase IV control mobility via altering matrix metalloproteinase activity. Mol Hum Reprod (2015) 0.76
Potential roles of DNA methylation in the initiation and establishment of replicative senescence revealed by array-based methylome and transcriptome analyses. PLoS One (2017) 0.75
Influences of the Gut Microbiota on DNA Methylation and Histone Modification. Dig Dis Sci (2017) 0.75
Layered genetic control of DNA methylation and gene expression: a locus of multiple sclerosis in healthy individuals. Hum Mol Genet (2015) 0.75
DNA methylation regulates hypothalamic gene expression linking parental diet during pregnancy to the offspring's risk of obesity in Psammomys obesus. Int J Obes (Lond) (2016) 0.75
Multiregional analysis of global 5-methylcytosine and 5-hydroxymethylcytosine throughout the progression of Alzheimer's disease. J Neurochem (2016) 0.75
Divergent DNA Methylation Provides Insights into the Evolution of Duplicate Genes in Zebrafish. G3 (Bethesda) (2016) 0.75
Genome-wide DNA methylation reprogramming in response to inorganic arsenic links inhibition of CTCF binding, DNMT expression and cellular transformation. Sci Rep (2017) 0.75
Identifying Reproducible Molecular Biomarkers for Gastric Cancer Metastasis with the Aid of Recurrence Information. Sci Rep (2016) 0.75
Proximal methylation features associated with nonrandom changes in gene body methylation. Genome Biol (2017) 0.75
Evolutionary Consequences of DNA Methylation in a Basal Metazoan. Mol Biol Evol (2016) 0.75
Body-hypomethylated human genes harbor extensive intragenic transcriptional activity and are prone to cancer-associated dysregulation. Nucleic Acids Res (2017) 0.75
Uncovering Driver DNA Methylation Events in Nonsmoking Early Stage Lung Adenocarcinoma. Biomed Res Int (2016) 0.75
DNA methylation profiling of the fibrinogen gene landscape in human cells and during mouse and zebrafish development. PLoS One (2013) 0.75
Reporter Gene Silencing in Targeted Mouse Mutants Is Associated with Promoter CpG Island Methylation. PLoS One (2015) 0.75
Decoding the Regulatory Landscape of Ageing in Musculoskeletal Engineered Tissues Using Genome-Wide DNA Methylation and RNASeq. PLoS One (2016) 0.75
H2B monoubiquitination: t'ub or not t'ub for inducible enhancers. Transcription (2017) 0.75
Mitochondrial DNA Hypomethylation Is a Biomarker Associated with Induced Senescence in Human Fetal Heart Mesenchymal Stem Cells. Stem Cells Int (2017) 0.75
The elephant shark methylome reveals conservation of epigenetic regulation across jawed vertebrates. F1000Res (2017) 0.75
Type 3 iodothyronine deiodinase in neonatal goats: molecular cloning, expression, localization, and methylation signature. Funct Integr Genomics (2016) 0.75
A complex association between DNA methylation and gene expression in human placenta at first and third trimesters. PLoS One (2017) 0.75
High-resolution profiling of histone methylations in the human genome. Cell (2007) 85.74
Genome-wide mapping of in vivo protein-DNA interactions. Science (2007) 64.92
Model-based analysis of ChIP-Seq (MACS). Genome Biol (2008) 51.63
Human DNA methylomes at base resolution show widespread epigenomic differences. Nature (2009) 34.27
The UCSC Table Browser data retrieval tool. Nucleic Acids Res (2004) 25.12
Genome-wide analysis of mammalian promoter architecture and evolution. Nat Genet (2006) 17.19
The UCSC Genome Browser database: update 2010. Nucleic Acids Res (2009) 16.58
Eukaryotic cytosine methyltransferases. Annu Rev Biochem (2005) 15.45
The history of cancer epigenetics. Nat Rev Cancer (2004) 14.38
Genomic DNA methylation: the mark and its mediators. Trends Biochem Sci (2006) 13.32
Role for DNA methylation in genomic imprinting. Nature (1993) 12.65
DNA methylation and human disease. Nat Rev Genet (2005) 12.00
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nat Genet (2006) 11.88
Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data. Nat Methods (2008) 11.61
Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells. Nat Biotechnol (2009) 11.18
A genome-wide analysis of CpG dinucleotides in the human genome distinguishes two distinct classes of promoters. Proc Natl Acad Sci U S A (2006) 10.63
Conserved role of intragenic DNA methylation in regulating alternative promoters. Nature (2010) 9.81
Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis. Nucleic Acids Res (2005) 8.69
Genome-wide evolutionary analysis of eukaryotic DNA methylation. Science (2010) 8.46
Dynamic changes in the human methylome during differentiation. Genome Res (2010) 7.96
Transcription of IAP endogenous retroviruses is constrained by cytosine methylation. Nat Genet (1998) 7.49
Gardening the genome: DNA methylation in Arabidopsis thaliana. Nat Rev Genet (2005) 6.39
Gene body-specific methylation on the active X chromosome. Science (2007) 6.33
Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array. BMC Genomics (2006) 5.59
CAGE: cap analysis of gene expression. Nat Methods (2006) 5.04
A human B cell methylome at 100-base pair resolution. Proc Natl Acad Sci U S A (2009) 4.72
High-efficiency full-length cDNA cloning by biotinylated CAP trapper. Genomics (1996) 4.41
The DNA methylation paradox. Trends Genet (1999) 4.40
Intragenic DNA methylation alters chromatin structure and elongation efficiency in mammalian cells. Nat Struct Mol Biol (2004) 4.00
Discovery of functional noncoding elements by digital analysis of chromatin structure. Proc Natl Acad Sci U S A (2004) 3.59
The ENCODE Project at UC Santa Cruz. Nucleic Acids Res (2006) 3.57
X-chromosome inactivation in mammals. Annu Rev Genet (1997) 3.50
Epigenetics and human disease. Annu Rev Genomics Hum Genet (2004) 2.78
Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE. Genome Res (2008) 2.60
CpG methylation is targeted to transcription units in an invertebrate genome. Genome Res (2007) 2.47
Replication timing-related and gene body-specific methylation of active human genes. Hum Mol Genet (2010) 1.92
Processive methylation of hemimethylated CpG sites by mouse Dnmt1 DNA methyltransferase. J Biol Chem (2004) 1.77
Gene expression and isoform variation analysis using Affymetrix Exon Arrays. BMC Genomics (2008) 1.76
Hyperphosphorylated C-terminal repeat domain-associating proteins in the nuclear proteome link transcription to DNA/chromatin modification and RNA processing. Mol Cell Proteomics (2002) 1.41
A Gibbs sampling strategy applied to the mapping of ambiguous short-sequence tags. Bioinformatics (2010) 1.15
DNA methylation and genome evolution in honeybee: gene length, expression, functional enrichment covary with the evolutionary signature of DNA methylation. Genome Biol Evol (2010) 0.97
Studies of DNA methylation in animals. J Cell Sci Suppl (1995) 0.95
Twists and turns of DNA methylation. Proc Natl Acad Sci U S A (2011) 0.91
Molecular biology. Site-seeing by sequencing. Science (2007) 0.87
A topoisomerase IIbeta-mediated dsDNA break required for regulated transcription. Science (2006) 6.71
Sensors and signals: a coactivator/corepressor/epigenetic code for integrating signal-dependent programs of transcriptional response. Genes Dev (2006) 6.32
Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Science (2010) 5.56
The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature (2011) 3.29
Inhibition of activated pericentromeric SINE/Alu repeat transcription in senescent human adult stem cells reinstates self-renewal. Cell Cycle (2011) 3.11
DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera. Proc Natl Acad Sci U S A (2009) 2.77
The genome of the fire ant Solenopsis invicta. Proc Natl Acad Sci U S A (2011) 2.74
A family of human microRNA genes from miniature inverted-repeat transposable elements. PLoS One (2007) 2.63
A computational genomics pipeline for prokaryotic sequencing projects. Bioinformatics (2010) 2.63
Origin and evolution of human microRNAs from transposable elements. Genetics (2007) 2.39
Dual coding of siRNAs and miRNAs by plant transposable elements. RNA (2008) 1.76
Purifying and directional selection in overlapping prokaryotic genes. Trends Genet (2002) 1.74
Variable molecular clocks in hominoids. Proc Natl Acad Sci U S A (2006) 1.66
Retrotransposons and their recognition of pol II promoters: a comprehensive survey of the transposable elements from the complete genome sequence of Schizosaccharomyces pombe. Genome Res (2003) 1.63
An induced Ets repressor complex regulates growth arrest during terminal macrophage differentiation. Cell (2002) 1.63
Understanding relationship between sequence and functional evolution in yeast proteins. Genetica (2006) 1.60
Heterogeneous genomic molecular clocks in primates. PLoS Genet (2006) 1.55
The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes. Genome Biol (2013) 1.52
Comparative analysis reveals signatures of differentiation amid genomic polymorphism in Lake Malawi cichlids. Genome Biol (2008) 1.49
DNA methylation and structural and functional bimodality of vertebrate promoters. Mol Biol Evol (2008) 1.49
APOBEC4, a new member of the AID/APOBEC family of polynucleotide (deoxy)cytidine deaminases predicted by computational analysis. Cell Cycle (2005) 1.49
Relaxed selection is a precursor to the evolution of phenotypic plasticity. Proc Natl Acad Sci U S A (2011) 1.38
Mutations of different molecular origins exhibit contrasting patterns of regional substitution rate variation. PLoS Comput Biol (2008) 1.35
Human cis natural antisense transcripts initiated by transposable elements. Trends Genet (2008) 1.35
Sociality is linked to rates of protein evolution in a highly social insect. Mol Biol Evol (2010) 1.34
Global similarity and local divergence in human and mouse gene co-expression networks. BMC Evol Biol (2006) 1.32
Divergent whole-genome methylation maps of human and chimpanzee brains reveal epigenetic basis of human regulatory evolution. Am J Hum Genet (2012) 1.31
Correlated asymmetry of sequence and functional divergence between duplicate proteins of Saccharomyces cerevisiae. Mol Biol Evol (2006) 1.28
Dasheng and RIRE2. A nonautonomous long terminal repeat element and its putative autonomous partner in the rice genome. Plant Physiol (2002) 1.24
Functional conservation of DNA methylation in the pea aphid and the honeybee. Genome Biol Evol (2010) 1.21
Comparative analyses of DNA methylation and sequence evolution using Nasonia genomes. Mol Biol Evol (2011) 1.20
Flow-dependent epigenetic DNA methylation regulates endothelial gene expression and atherosclerosis. J Clin Invest (2014) 1.18
The evolution of invertebrate gene body methylation. Mol Biol Evol (2012) 1.18
Epigenetics: judge, jury and executioner of stem cell fate. Epigenetics (2012) 1.17
Genome sequences for six Rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capabilities. J Bacteriol (2012) 1.16
A Gibbs sampling strategy applied to the mapping of ambiguous short-sequence tags. Bioinformatics (2010) 1.15
No rest for REST: REST/NRSF regulation of neurogenesis. Cell (2005) 1.14
Doubts about complex speciation between humans and chimpanzees. Trends Ecol Evol (2009) 1.10
Retroviral promoters in the human genome. Bioinformatics (2008) 1.10
DNA methylation and transcriptional noise. Epigenetics Chromatin (2013) 1.09
Evaluating the protein coding potential of exonized transposable element sequences. Biol Direct (2007) 1.05
Transposable element derived DNaseI-hypersensitive sites in the human genome. Biol Direct (2006) 1.04
Genome sequences for five strains of the emerging pathogen Haemophilus haemolyticus. J Bacteriol (2011) 1.04
Epigenetic histone modifications of human transposable elements: genome defense versus exaptation. Mob DNA (2010) 1.04
Evolution of microRNAs and the diversification of species. Genome Biol Evol (2010) 1.02
Evolutionary rates and patterns for human transcription factor binding sites derived from repetitive DNA. BMC Genomics (2008) 1.02
Multiple independent evolutionary solutions to core histone gene regulation. Genome Biol (2006) 1.00
Transposable elements and the evolution of eukaryotic complexity. Curr Issues Mol Biol (2002) 0.99
Functional relevance of CpG island length for regulation of gene expression. Genetics (2011) 0.99
BroadPeak: a novel algorithm for identifying broad peaks in diffuse ChIP-seq datasets. Bioinformatics (2013) 0.98
Epigenetic regulation of transposable element derived human gene promoters. Gene (2011) 0.98
Genome sequence of the Mycobacterium colombiense type strain, CECT 3035. J Bacteriol (2011) 0.98
Evolutionary rate variation in Old World monkeys. Biol Lett (2009) 0.97
DNA methylation and genome evolution in honeybee: gene length, expression, functional enrichment covary with the evolutionary signature of DNA methylation. Genome Biol Evol (2010) 0.97
Repetitive DNA elements, nucleosome binding and human gene expression. Gene (2009) 0.96
Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects. Genome Biol Evol (2013) 0.96
What are the determinants of gene expression levels and breadths in the human genome? Hum Mol Genet (2011) 0.96
Genome-wide prediction and analysis of human chromatin boundary elements. Nucleic Acids Res (2011) 0.93
Epigenetic regulation of human cis-natural antisense transcripts. Nucleic Acids Res (2012) 0.91
Identification of a tumor-suppressive human-specific microRNA within the FHIT tumor-suppressor gene. Cancer Res (2014) 0.90
A fully resolved genus level phylogeny of neotropical primates (Platyrrhini). Mol Phylogenet Evol (2009) 0.90
Endogenous retroviruses of the chicken genome. Biol Direct (2008) 0.89
Primate phylogenomics: developing numerous nuclear non-coding, non-repetitive markers for ecological and phylogenetic applications and analysis of evolutionary rate variation. BMC Genomics (2009) 0.89
Chromatin signature discovery via histone modification profile alignments. Nucleic Acids Res (2012) 0.89
Neisseria Base: a comparative genomics database for Neisseria meningitidis. Database (Oxford) (2011) 0.88
The function of intragenic DNA methylation: insights from insect epigenomes. Integr Comp Biol (2013) 0.88
Prediction of transposable element derived enhancers using chromatin modification profiles. PLoS One (2011) 0.88
Co-evolutionary rates of functionally related yeast genes. Evol Bioinform Online (2006) 0.88
Transcription factor binding sites are highly enriched within microRNA precursor sequences. Biol Direct (2011) 0.88
Obligate mutualism within a host drives the extreme specialization of a fig wasp genome. Genome Biol (2013) 0.87
Inactivation of mismatch repair increases the diversity of Vibrio parahaemolyticus. Environ Microbiol (2009) 0.87
Meningococcus genome informatics platform: a system for analyzing multilocus sequence typing data. Nucleic Acids Res (2009) 0.86
Epigenetic regulation of Mammalian genomes by transposable elements. Ann N Y Acad Sci (2009) 0.86
Predicted functional RNAs within coding regions constrain evolutionary rates of yeast proteins. PLoS One (2008) 0.86
Benchmarking computational tools for polymorphic transposable element detection. Brief Bioinform (2016) 0.85
Kin selection, genomics and caste-antagonistic pleiotropy. Biol Lett (2013) 0.85
A c-Myc regulatory subnetwork from human transposable element sequences. Mol Biosyst (2009) 0.85
DNA methylation and evolution of duplicate genes. Proc Natl Acad Sci U S A (2014) 0.85
Epigenetic inheritance and genome regulation: is DNA methylation linked to ploidy in haplodiploid insects? Proc Biol Sci (2014) 0.84
A method for visualization of "omic" datasets for sphingolipid metabolism to predict potentially interesting differences. J Lipid Res (2011) 0.84
Lineage-specific variation in slow- and fast-X evolution in primates. Evolution (2012) 0.83
Depletion of nuclear histone H2A variants is associated with chronic DNA damage signaling upon drug-evoked senescence of human somatic cells. Aging (Albany NY) (2012) 0.83
Path lengths in protein-protein interaction networks and biological complexity. Proteomics (2011) 0.82
Effect of the transposable element environment of human genes on gene length and expression. Genome Biol Evol (2011) 0.82
Mammalian nonsynonymous sites are not overdispersed: comparative genomic analysis of index of dispersion of mammalian proteins. Mol Biol Evol (2007) 0.82
Highly conserved regimes of neighbor-base-dependent mutation generated the background primary-structural heterogeneities along vertebrate chromosomes. PLoS One (2008) 0.82
Relating the disease mutation spectrum to the evolution of the cystic fibrosis transmembrane conductance regulator (CFTR). PLoS One (2012) 0.81
Adult stem cells: simply a tool for regenerative medicine or an additional piece in the puzzle of human aging? Cell Cycle (2011) 0.81
Protein interactions with piALU RNA indicates putative participation of retroRNA in the cell cycle, DNA repair and chromatin assembly. Mob Genet Elements (2012) 0.81