PubRank

Bauke W Dijkstra

Author PubWeight™ 80.06‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 Structure of human chitotriosidase. Implications for specific inhibitor design and function of mammalian chitinase-like lectins. J Biol Chem 2002 1.71
2 Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations. J Mol Biol 2003 1.59
3 Crystal structure and carbohydrate-binding properties of the human cartilage glycoprotein-39. J Biol Chem 2003 1.56
4 Crystal structure of Agaricus bisporus mushroom tyrosinase: identity of the tetramer subunits and interaction with tropolone. Biochemistry 2011 1.49
5 Formation of the productive ATP-Mg2+-bound dimer of GlcV, an ABC-ATPase from Sulfolobus solfataricus. J Mol Biol 2003 1.28
6 Crystal structure of the copper-containing quercetin 2,3-dioxygenase from Aspergillus japonicus. Structure 2002 1.22
7 Anaerobic enzyme.substrate structures provide insight into the reaction mechanism of the copper-dependent quercetin 2,3-dioxygenase. Proc Natl Acad Sci U S A 2002 1.18
8 The X-ray structure of trans-3-chloroacrylic acid dehalogenase reveals a novel hydration mechanism in the tautomerase superfamily. J Biol Chem 2003 1.15
9 Crystal structure of a 117 kDa glucansucrase fragment provides insight into evolution and product specificity of GH70 enzymes. Proc Natl Acad Sci U S A 2010 1.12
10 Crystal structures of native and inactivated cis-3-chloroacrylic acid dehalogenase. Structural basis for substrate specificity and inactivation by (R)-oxirane-2-carboxylate. J Biol Chem 2006 1.12
11 Three-way stabilization of the covalent intermediate in amylomaltase, an alpha-amylase-like transglycosylase. J Biol Chem 2007 1.12
12 Glucansucrases: three-dimensional structures, reactions, mechanism, α-glucan analysis and their implications in biotechnology and food applications. J Biotechnol 2012 1.10
13 Structure and mechanism of bacterial dehalogenases: different ways to cleave a carbon-halogen bond. Curr Opin Struct Biol 2003 1.08
14 EPR characterization of the mononuclear Cu-containing Aspergillus japonicus quercetin 2,3-dioxygenase reveals dramatic changes upon anaerobic binding of substrates. Eur J Biochem 2002 1.07
15 Functional analysis of the copper-dependent quercetin 2,3-dioxygenase. 1. Ligand-induced coordination changes probed by X-ray crystallography: inhibition, ordering effect, and mechanistic insights. Biochemistry 2002 1.07
16 Expression and characterization of active site mutants of hevamine, a chitinase from the rubber tree Hevea brasiliensis. Eur J Biochem 2002 1.07
17 A crystallographic study of Cys69Ala flavodoxin II from Azotobacter vinelandii: structural determinants of redox potential. Protein Sci 2005 1.06
18 Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage. J Biol Chem 2007 1.05
19 The sequence and crystal structure of the alpha-amino acid ester hydrolase from Xanthomonas citri define a new family of beta-lactam antibiotic acylases. J Biol Chem 2003 1.04
20 Structure of Spa15, a type III secretion chaperone from Shigella flexneri with broad specificity. EMBO Rep 2004 1.03
21 Crystal structure of MltA from Escherichia coli reveals a unique lytic transglycosylase fold. J Mol Biol 2005 1.02
22 The quorum-quenching N-acyl homoserine lactone acylase PvdQ is an Ntn-hydrolase with an unusual substrate-binding pocket. Proc Natl Acad Sci U S A 2009 1.02
23 Two major archaeal pseudomurein endoisopeptidases: PeiW and PeiP. Archaea 2010 0.98
24 Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger. FEBS Lett 2003 0.97
25 Mutations converting cyclodextrin glycosyltransferase from a transglycosylase into a starch hydrolase. FEBS Lett 2002 0.97
26 Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution. Biochem J 2008 0.96
27 Acetobacter turbidans alpha-amino acid ester hydrolase: how a single mutation improves an antibiotic-producing enzyme. J Biol Chem 2005 0.93
28 Functional and structural characterization of α-(1->2) branching sucrase derived from DSR-E glucansucrase. J Biol Chem 2012 0.93
29 Structural and mutational characterization of the catalytic A-module of the mannuronan C-5-epimerase AlgE4 from Azotobacter vinelandii. J Biol Chem 2008 0.92
30 Structure of the α-1,6/α-1,4-specific glucansucrase GTFA from Lactobacillus reuteri 121. Acta Crystallogr Sect F Struct Biol Cryst Commun 2012 0.92
31 Murein and pseudomurein cell wall binding domains of bacteria and archaea--a comparative view. Appl Microbiol Biotechnol 2011 0.91
32 Crystal structure of quinohemoprotein alcohol dehydrogenase from Comamonas testosteroni: structural basis for substrate oxidation and electron transfer. J Biol Chem 2001 0.90
33 Escherichia coli MltA: MAD phasing and refinement of a tetartohedrally twinned protein crystal structure. Acta Crystallogr D Biol Crystallogr 2005 0.89
34 Identification of acceptor substrate binding subsites +2 and +3 in the amylomaltase from Thermus thermophilus HB8. Biochemistry 2007 0.89
35 Acetobacter turbidans alpha-amino acid ester hydrolase: merohedral twinning in P21 obscured by pseudo-translational NCS. Acta Crystallogr D Biol Crystallogr 2003 0.89
36 Structures of an isopenicillin N converting Ntn-hydrolase reveal different catalytic roles for the active site residues of precursor and mature enzyme. Structure 2010 0.88
37 AcmD, a homolog of the major autolysin AcmA of Lactococcus lactis, binds to the cell wall and contributes to cell separation and autolysis. PLoS One 2013 0.88
38 Improved catalytic properties of halohydrin dehalogenase by modification of the halide-binding site. Biochemistry 2005 0.88
39 The remote substrate binding subsite -6 in cyclodextrin-glycosyltransferase controls the transferase activity of the enzyme via an induced-fit mechanism. J Biol Chem 2001 0.87
40 Conversion of cyclodextrin glycosyltransferase into a starch hydrolase by directed evolution: the role of alanine 230 in acceptor subsite +1. Biochemistry 2003 0.87
41 Structural mimicry for vinculin activation by IpaA, a virulence factor of Shigella flexneri. EMBO Rep 2006 0.86
42 Functional analysis of the copper-dependent quercetin 2,3-dioxygenase. 2. X-ray absorption studies of native enzyme and anaerobic complexes with the substrates quercetin and myricetin. Biochemistry 2002 0.86
43 Crystal structure and biochemical properties of a novel thermostable esterase containing an immunoglobulin-like domain. J Mol Biol 2008 0.86
44 The X-ray structure of the haloalcohol dehalogenase HheA from Arthrobacter sp. strain AD2: insight into enantioselectivity and halide binding in the haloalcohol dehalogenase family. J Bacteriol 2006 0.86
45 Structural basis of phospholipase activity of Staphylococcus hyicus lipase. J Mol Biol 2007 0.86
46 Fortuitous structure determination of 'as-isolated' Escherichia coli bacterioferritin in a novel crystal form. Acta Crystallogr Sect F Struct Biol Cryst Commun 2006 0.86
47 Engineering cyclodextrin glycosyltransferase into a starch hydrolase with a high exo-specificity. J Biotechnol 2003 0.85
48 Improved thermostability of bacillus circulans cyclodextrin glycosyltransferase by the introduction of a salt bridge. Proteins 2004 0.85
49 The fully conserved Asp residue in conserved sequence region I of the alpha-amylase family is crucial for the catalytic site architecture and activity. FEBS Lett 2003 0.84
50 Structural basis for the enantioselectivity of an epoxide ring opening reaction catalyzed by halo alcohol dehalogenase HheC. J Am Chem Soc 2005 0.84
51 Reducing virulence of the human pathogen Burkholderia by altering the substrate specificity of the quorum-quenching acylase PvdQ. Proc Natl Acad Sci U S A 2014 0.84
52 Crystallization and preliminary X-ray crystallographic analysis of tyrosinase from the mushroom Agaricus bisporus. Acta Crystallogr Sect F Struct Biol Cryst Commun 2011 0.83
53 A genetically engineered protein domain binding to bacterial murein, archaeal pseudomurein, and fungal chitin cell wall material. Appl Microbiol Biotechnol 2012 0.83
54 Mechanism-inspired engineering of phenylalanine aminomutase for enhanced β-regioselective asymmetric amination of cinnamates. Angew Chem Int Ed Engl 2011 0.83
55 A minimum of three motifs is essential for optimal binding of pseudomurein cell wall-binding domain of Methanothermobacter thermautotrophicus. PLoS One 2011 0.83
56 Thermus thermophilus glycoside hydrolase family 57 branching enzyme: crystal structure, mechanism of action, and products formed. J Biol Chem 2010 0.82
57 Biochemical and structural exploration of the catalytic capacity of Sulfolobus KDG aldolases. Biochem J 2007 0.82
58 Characterization of aptamer-protein complexes by X-ray crystallography and alternative approaches. Int J Mol Sci 2012 0.82
59 Directed evolution of Bacillus subtilis lipase A by use of enantiomeric phosphonate inhibitors: crystal structures and phage display selection. Chembiochem 2006 0.82
60 Thermoanaerobacterium thermosulfurigenes cyclodextrin glycosyltransferase. Eur J Biochem 2003 0.82
61 Crystal structure of the leucine aminopeptidase from Pseudomonas putida reveals the molecular basis for its enantioselectivity and broad substrate specificity. J Mol Biol 2010 0.81
62 Crystal structure of inulosucrase from Lactobacillus: insights into the substrate specificity and product specificity of GH68 fructansucrases. J Mol Biol 2011 0.81
63 Purification, crystallization and preliminary X-ray diffraction analysis of an archaeal ABC-ATPase. Acta Crystallogr D Biol Crystallogr 2002 0.80
64 Loop grafting of Bacillus subtilis lipase A: inversion of enantioselectivity. Chem Biol 2008 0.80
65 Biocatalytic and structural properties of a highly engineered halohydrin dehalogenase. Chembiochem 2013 0.80
66 Single-crystal EPR study at 95 GHz of the type 2 copper site of the inhibitor-bound quercetin 2,3-dioxygenase. Biophys J 2003 0.80
67 A novel genetic selection system for improved enantioselectivity of Bacillus subtilis lipase A. Chembiochem 2008 0.80
68 Structural and kinetic studies on ligand binding in wild-type and active-site mutants of penicillin acylase. Protein Eng Des Sel 2004 0.80
69 Purification, crystallization and preliminary X-ray crystallographic analysis of 3-ketosteroid Δ1-dehydrogenase from Rhodococcus erythropolis SQ1. Acta Crystallogr Sect F Struct Biol Cryst Commun 2012 0.79
70 Biophysical characterization of mutants of Bacillus subtilis lipase evolved for thermostability: factors contributing to increased activity retention. Protein Sci 2012 0.79
71 Purification, crystallization and preliminary X-ray analysis of a thermostable glycoside hydrolase family 43 beta-xylosidase from Geobacillus thermoleovorans IT-08. Acta Crystallogr Sect F Struct Biol Cryst Commun 2007 0.79
72 Structure and catalytic mechanism of 3-ketosteroid-Delta4-(5α)-dehydrogenase from Rhodococcus jostii RHA1 genome. J Biol Chem 2012 0.79
73 Crystal structure and site-directed mutagenesis of 3-ketosteroid Δ1-dehydrogenase from Rhodococcus erythropolis SQ1 explain its catalytic mechanism. J Biol Chem 2013 0.78
74 The crystal structure of a hyperthermoactive exopolygalacturonase from Thermotoga maritima reveals a unique tetramer. FEBS Lett 2009 0.78
75 The role of conserved inulosucrase residues in the reaction and product specificity of Lactobacillus reuteri inulosucrase. FEBS J 2012 0.78
76 Crystal structure of α-1,4-glucan lyase, a unique glycoside hydrolase family member with a novel catalytic mechanism. J Biol Chem 2013 0.77
77 Flexibility of truncated and full-length glucansucrase GTF180 enzymes from Lactobacillus reuteri 180. FEBS J 2014 0.77
78 Biochemical properties and crystal structure of a β-phenylalanine aminotransferase from Variovorax paradoxus. Appl Environ Microbiol 2012 0.77
79 Structural investigations into the stereochemistry and activity of a phenylalanine-2,3-aminomutase from Taxus chinensis. Biochemistry 2014 0.76
80 Crystallization and preliminary X-ray analysis of an enantioselective halohydrin dehalogenase from Agrobacterium radiobacter AD1. Acta Crystallogr D Biol Crystallogr 2001 0.76
81 Structural investigation of the transmembrane C domain of the mannitol permease from Escherichia coli using 5-FTrp fluorescence spectroscopy. Biochim Biophys Acta 2011 0.76
82 Structural determinants of the β-selectivity of a bacterial aminotransferase. J Biol Chem 2012 0.76
83 Catalysis and regulation - from structure to function. Curr Opin Struct Biol 2003 0.76
84 Crystallization and preliminary crystallographic analysis of an esterase with a novel domain from the hyperthermophile Thermotoga maritima. Acta Crystallogr Sect F Struct Biol Cryst Commun 2007 0.76
85 Cloning, overexpression, purification, crystallization and preliminary X-ray analysis of 3-ketosteroid Δ(4)-(5α)-dehydrogenase from Rhodococcus jostii RHA1. Acta Crystallogr Sect F Struct Biol Cryst Commun 2011 0.76
86 Purification, crystallization and preliminary X-ray diffraction of Cys103Ala acyl coenzyme A: isopenicillin N acyltransferase from Penicillium chrysogenum. Acta Crystallogr D Biol Crystallogr 2002 0.76
87 An approach to prevent aggregation during the purification and crystallization of wild type acyl coenzyme A: isopenicillin N acyltransferase from Penicillium chrysogenum. Protein Expr Purif 2005 0.76
88 Functional importance of calcium binding sites in outer membrane phospholipase A. Biochim Biophys Acta 2002 0.75
89 Crystallization and preliminary X-ray analysis of carnein, a serine protease from Ipomoea carnea. Acta Crystallogr Sect F Struct Biol Cryst Commun 2009 0.75
90 Three-dimensional structures of enzymes useful for beta-lactam antibiotic production. Curr Opin Biotechnol 2004 0.75
91 Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis. FEBS J 2013 0.75
92 Enhancement of the enantioselectivity of carboxylesterase A by structure-based mutagenesis. J Biotechnol 2012 0.75
93 X-ray analysis of two antibiotic-synthesizing bacterial ester hydrolases: preliminary results. Acta Crystallogr D Biol Crystallogr 2002 0.75
94 X-ray crystallographic validation of structure predictions used in computational design for protein stabilization. Proteins 2015 0.75
95 Ironing out their differences: dissecting the structural determinants of a phenylalanine aminomutase and ammonia lyase. ACS Chem Biol 2015 0.75
96 Oils used in microbatch crystallization do not remove a detergent from the drops they cover. Acta Crystallogr D Biol Crystallogr 2003 0.75
97 Purification, crystallization and preliminary X-ray analysis of the lytic transglycosylase MltA from Escherichia coli. Acta Crystallogr D Biol Crystallogr 2004 0.75