Published in Mutat Res on May 21, 2010
A novel computational framework for simultaneous integration of multiple types of genomic data to identify microRNA-gene regulatory modules. Bioinformatics (2011) 1.68
miR-506 regulates epithelial mesenchymal transition in breast cancer cell lines. PLoS One (2013) 1.31
Potentiality of a triple microRNA classifier: miR-193a-3p, miR-23a and miR-338-5p for early detection of colorectal cancer. BMC Cancer (2013) 1.28
Differential expression of miR-144* as a novel fecal-based diagnostic marker for colorectal cancer. J Gastroenterol (2011) 1.16
MicroRNAs as potential biomarkers in cancer: opportunities and challenges. Biomed Res Int (2015) 1.12
Identifying multi-layer gene regulatory modules from multi-dimensional genomic data. Bioinformatics (2012) 1.11
The role of miRNA in the direct and indirect effects of ionizing radiation. Radiat Environ Biophys (2011) 1.08
MicroRNA-320c inhibits tumorous behaviors of bladder cancer by targeting Cyclin-dependent kinase 6. J Exp Clin Cancer Res (2014) 0.97
Integrating sequence, expression and interaction data to determine condition-specific miRNA regulation. Bioinformatics (2013) 0.97
Crucial role for early growth response-1 in the transcriptional regulation of miR-20b in breast cancer. Oncotarget (2013) 0.94
Learning regulatory programs by threshold SVD regression. Proc Natl Acad Sci U S A (2014) 0.92
Deep sequencing identifies circulating mouse miRNAs that are functionally implicated in manifestations of aging and responsive to calorie restriction. Aging (Albany NY) (2013) 0.90
Circadian disruption-induced microRNAome deregulation in rat mammary gland tissues. Oncoscience (2015) 0.89
Circadian disruption and breast cancer: an epigenetic link? Oncotarget (2015) 0.89
Multiple tumor suppressor microRNAs regulate telomerase and TCF7, an important transcriptional regulator of the Wnt pathway. PLoS One (2014) 0.89
MicroRNA profiling of carcinogen-induced rat colon tumors and the influence of dietary spinach. Mol Nutr Food Res (2012) 0.87
Potential microRNA-mediated oncogenic intercellular communication revealed by pan-cancer analysis. Sci Rep (2014) 0.85
p53 Ser15 phosphorylation and histone modifications contribute to IR-induced miR-34a transcription in mammary epithelial cells. Cell Cycle (2013) 0.85
Medical genetics and epigenetics of telomerase. J Cell Mol Med (2011) 0.82
Comparison of Serum MicroRNA21 and Tumor Markers in Diagnosis of Early Non-Small Cell Lung Cancer. Dis Markers (2016) 0.81
Role of microRNA deregulation in the pathogenesis of diffuse large B-cell lymphoma (DLBCL). Leuk Res (2013) 0.80
microRNA expression profile of peripheral blood mononuclear cells of Klinefelter syndrome. Exp Ther Med (2012) 0.79
A suppressive role of ionizing radiation-responsive miR-29c in the development of liver carcinoma via targeting WIP1. Oncotarget (2015) 0.78
Identification of miRNA-mRNA regulatory modules by exploring collective group relationships. BMC Genomics (2016) 0.77
Role of microRNAs and DNA Methyltransferases in Transmitting Induced Genomic Instability between Cell Generations. Front Public Health (2014) 0.77
Non-coding RNAs including miRNAs, piRNAs, and tRNAs in human cancer. Oncotarget (2015) 0.76
Circadian-disruption-induced gene expression changes in rodent mammary tissues. Oncoscience (2016) 0.75
MicroRNAs Circulate in the Hemolymph of Drosophila and Accumulate Relative to Tissue microRNAs in an Age-Dependent Manner. Genomics Insights (2016) 0.75
Ameloblastoma RNA profiling uncovers a distinct non-coding RNA signature. Oncotarget (2016) 0.75
Identification of microRNA signature and potential pathway targets in prostate cancer. Exp Biol Med (Maywood) (2016) 0.75
MicroRNA-10a-5p and microRNA-34c-5p in laryngeal epithelial premalignant lesions: differential expression and clinicopathological correlation. Eur Arch Otorhinolaryngol (2014) 0.75
miR-98 functions as a tumor suppressor in salivary adenoid cystic carcinomas. Onco Targets Ther (2016) 0.75
Chemo brain: From discerning mechanisms to lifting the brain fog - An aging connection. Cell Cycle (2017) 0.75
Downregulation of miR-122 in the rodent and human hepatocellular carcinomas. J Cell Biochem (2006) 4.15
Alterations of microRNAs and their targets are associated with acquired resistance of MCF-7 breast cancer cells to cisplatin. Int J Cancer (2010) 2.10
Transgenerational changes in the genome stability and methylation in pathogen-infected plants: (virus-induced plant genome instability). Nucleic Acids Res (2007) 1.93
DNA double-strand breaks form in bystander cells after microbeam irradiation of three-dimensional human tissue models. Cancer Res (2007) 1.79
Pathogen-induced systemic plant signal triggers DNA rearrangements. Nature (2003) 1.77
Germ-line mutations, DNA damage, and global hypermethylation in mice exposed to particulate air pollution in an urban/industrial location. Proc Natl Acad Sci U S A (2008) 1.62
Heat-killed bacteria induce genome instability in mouse small intestine, liver and spleen tissues. Cell Cycle (2009) 1.43
Vesicular stomatitis virus oncolysis is potentiated by impairing mTORC1-dependent type I IFN production. Proc Natl Acad Sci U S A (2010) 1.39
Induction of microRNAome deregulation in rat liver by long-term tamoxifen exposure. Mutat Res (2007) 1.34
Neutrophils recruited to sites of infection protect from virus challenge by releasing neutrophil extracellular traps. Cell Host Microbe (2013) 1.33
Role of epigenetic effectors in maintenance of the long-term persistent bystander effect in spleen in vivo. Carcinogenesis (2007) 1.26
Radiation-induced bystander effects in vivo are epigenetically regulated in a tissue-specific manner. Environ Mol Mutagen (2009) 1.24
Role of ferritin alterations in human breast cancer cells. Breast Cancer Res Treat (2011) 1.22
Loss of DNA methylation and histone H4 lysine 20 trimethylation in human breast cancer cells is associated with aberrant expression of DNA methyltransferase 1, Suv4-20h2 histone methyltransferase and methyl-binding proteins. Cancer Biol Ther (2006) 1.22
Dose-dependence, sex- and tissue-specificity, and persistence of radiation-induced genomic DNA methylation changes. Biochem Biophys Res Commun (2004) 1.16
In vivo bystander effect: cranial X-irradiation leads to elevated DNA damage, altered cellular proliferation and apoptosis, and increased p53 levels in shielded spleen. Int J Radiat Oncol Biol Phys (2008) 1.16
Epigenetic profiling of multidrug-resistant human MCF-7 breast adenocarcinoma cells reveals novel hyper- and hypomethylated targets. Mol Cancer Ther (2007) 1.13
Fractionated low-dose radiation exposure leads to accumulation of DNA damage and profound alterations in DNA and histone methylation in the murine thymus. Mol Cancer Res (2005) 1.13
Genome hypermethylation in Pinus silvestris of Chernobyl--a mechanism for radiation adaptation? Mutat Res (2003) 1.09
Molecular aspects of plant adaptation to life in the Chernobyl zone. Plant Physiol (2004) 1.09
The role of miRNA in the direct and indirect effects of ionizing radiation. Radiat Environ Biophys (2011) 1.08
Sex-specific microRNAome deregulation in the shielded bystander spleen of cranially exposed mice. Cell Cycle (2008) 1.08
Myxoma virus virotherapy for glioma in immunocompetent animal models: optimizing administration routes and synergy with rapamycin. Cancer Res (2010) 1.08
Non-targeted radiation effects-an epigenetic connection. Mutat Res (2011) 1.07
DNA damage-induced upregulation of miR-709 in the germline downregulates BORIS to counteract aberrant DNA hypomethylation. Cell Cycle (2008) 1.05
Epigenetic changes in patients with multiple sclerosis. Nat Rev Neurol (2012) 1.05
Sex-specific radiation-induced microRNAome responses in the hippocampus, cerebellum and frontal cortex in a mouse model. Mutat Res (2010) 1.04
Genome stability of vtc1, tt4, and tt5 Arabidopsis thaliana mutants impaired in protection against oxidative stress. Plant J (2004) 1.03
Effect of long-term tamoxifen exposure on genotoxic and epigenetic changes in rat liver: implications for tamoxifen-induced hepatocarcinogenesis. Carcinogenesis (2006) 1.03
Epigenetic dysregulation underlies radiation-induced transgenerational genome instability in vivo. Int J Radiat Oncol Biol Phys (2006) 1.03
Maternal stress induces epigenetic signatures of psychiatric and neurological diseases in the offspring. PLoS One (2013) 1.00
microRNAome changes in bystander three-dimensional human tissue models suggest priming of apoptotic pathways. Carcinogenesis (2010) 0.99
Ancestral exposure to stress epigenetically programs preterm birth risk and adverse maternal and newborn outcomes. BMC Med (2014) 0.99
Altered microRNA expression patterns in irradiated hematopoietic tissues suggest a sex-specific protective mechanism. Biochem Biophys Res Commun (2008) 0.99
Hypomethylation and genome instability in the germline of exposed parents and their progeny is associated with altered miRNA expression. Carcinogenesis (2009) 0.98
Sex- and tissue-specific expression of maintenance and de novo DNA methyltransferases upon low dose X-irradiation in mice. Biochem Biophys Res Commun (2004) 0.98
Systemic plant signal triggers genome instability. Plant J (2004) 0.97
Selective brain responses to acute and chronic low-dose X-ray irradiation in males and females. Biochem Biophys Res Commun (2004) 0.96
Stable loss of global DNA methylation in the radiation-target tissue--a possible mechanism contributing to radiation carcinogenesis? Biochem Biophys Res Commun (2005) 0.96
Paternal cranial irradiation induces distant bystander DNA damage in the germline and leads to epigenetic alterations in the offspring. Cell Cycle (2008) 0.95
Crucial role for early growth response-1 in the transcriptional regulation of miR-20b in breast cancer. Oncotarget (2013) 0.94
Transcriptome profiling reveals similarities and differences in plant responses to cadmium and lead. Mutat Res (2005) 0.94
Methylation changes in muscle and liver tissues of male and female mice exposed to acute and chronic low-dose X-ray-irradiation. Mutat Res (2004) 0.93
Transcriptome analysis reveals fundamental differences in plant response to acute and chronic exposure to ionizing radiation. Mutat Res (2007) 0.93
Betaine rescue of an animal model with methylenetetrahydrofolate reductase deficiency. Biochem J (2004) 0.92
Parental enrichment and offspring development: modifications to brain, behavior and the epigenome. Behav Brain Res (2011) 0.92
Multiplex PCR for simultaneous detection of 677 C-->T and 1298 A-->C polymorphisms in methylenetetrahydrofolate reductase gene for population studies of cancer risk. Cancer Lett (2002) 0.91
UV-C-irradiated Arabidopsis and tobacco emit volatiles that trigger genomic instability in neighboring plants. Plant Cell (2011) 0.91
Micronuclei in genotoxicity assessment: from genetics to epigenetics and beyond. Front Genet (2013) 0.90
Intense THz pulses cause H2AX phosphorylation and activate DNA damage response in human skin tissue. Biomed Opt Express (2013) 0.90
Induction and persistence of radiation-induced DNA damage is more pronounced in young animals than in old animals. Aging (Albany NY) (2011) 0.90
Prior exposure to oxidized low-density lipoprotein limits apoptosis in subsequent generations of endothelial cells by altering promoter methylation. Am J Physiol Heart Circ Physiol (2011) 0.90
Radiation-induced bystander effects in vivo are sex specific. Mutat Res (2008) 0.90
Impact of Dnmt1 deficiency, with and without low folate diets, on tumor numbers and DNA methylation in Min mice. Carcinogenesis (2003) 0.89
Prenatal bystander stress alters brain, behavior, and the epigenome of developing rat offspring. Dev Neurosci (2011) 0.89
Radiation-induced molecular changes in rat mammary tissue: possible implications for radiation-induced carcinogenesis. Int J Radiat Biol (2006) 0.89
Intense THz pulses down-regulate genes associated with skin cancer and psoriasis: a new therapeutic avenue? Sci Rep (2013) 0.88
Novel retinoblastoma binding protein RBBP9 modulates sex-specific radiation responses in vivo. Carcinogenesis (2005) 0.88
A systematic experimental evaluation of microRNA markers of human bladder cancer. Front Genet (2013) 0.86
Myxoma virus infection promotes NK lysis of malignant gliomas in vitro and in vivo. PLoS One (2013) 0.85
Epigenetics in radiation biology: a new research frontier. Front Genet (2013) 0.85
Sex and tissue-specific differences in low-dose radiation-induced oncogenic signaling. Int J Radiat Biol (2005) 0.85
Tandem repeat mutation, global DNA methylation, and regulation of DNA methyltransferases in cultured mouse embryonic fibroblast cells chronically exposed to chemicals with different modes of action. Environ Mol Mutagen (2008) 0.85
Epigenetic reprogramming of liver cells in tamoxifen-induced rat hepatocarcinogenesis. Mol Carcinog (2007) 0.85
p53 Ser15 phosphorylation and histone modifications contribute to IR-induced miR-34a transcription in mammary epithelial cells. Cell Cycle (2013) 0.85
Modulation of DNA methylation levels sensitizes doxorubicin-resistant breast adenocarcinoma cells to radiation-induced apoptosis. Biochem Biophys Res Commun (2009) 0.82
Role of DNA damage and epigenetic DNA methylation changes in radiation-induced genomic instability and bystander effects in germline in vivo. Curr Mol Pharmacol (2011) 0.82
Genotoxicity of 2,4-D and dicamba revealed by transgenic Arabidopsis thaliana plants harboring recombination and point mutation markers. Mutat Res (2003) 0.81
H2AX phosphorylation in response to DNA double-strand break formation during bystander signalling: effect of microRNA knockdown. Radiat Prot Dosimetry (2010) 0.81
Reversibility of pre-malignant estrogen-induced epigenetic changes. Cell Cycle (2010) 0.81
Epigenetics and miRNAs in the diagnosis and treatment of multiple sclerosis. Trends Mol Med (2012) 0.81
The increased expression of proteins involved in proliferation, DNA repair and DNA methylation in spleen of mice exposed to E. coli O157:H7 lipopolysaccharide. Environ Mol Mutagen (2013) 0.80
Immunosenescence is associated with altered gene expression and epigenetic regulation in primary and secondary immune organs. Front Genet (2013) 0.79
Identification of differentially methylated sites within unmethylated DNA domains in normal and cancer cells. Anal Biochem (2006) 0.79
Gene expression profiling reveals underlying molecular mechanisms of the early stages of tamoxifen-induced rat hepatocarcinogenesis. Toxicol Appl Pharmacol (2007) 0.79
High frequency of nucleotide misincorporations upon the processing of double-strand breaks. DNA Repair (Amst) (2004) 0.79
Development-dependent expression of DNA repair genes and epigenetic regulators in Arabidopsis plants exposed to ionizing radiation. Radiat Res (2015) 0.79
Monte Carlo-based dose reconstruction in a rat model for scattered ionizing radiation investigations. Int J Radiat Biol (2013) 0.79
Molecular mechanisms of radiation resistance in doxorubicin-resistant breast adenocarcinoma cells. Int J Oncol (2013) 0.79
Atrazine induces homologous recombination but not point mutation in the transgenic plant-based biomonitoring assay. Arch Environ Contam Toxicol (2004) 0.78
Exposure to estrogen and ionizing radiation causes epigenetic dysregulation, activation of mitogen-activated protein kinase pathways, and genome instability in the mammary gland of ACI rats. Cancer Biol Ther (2013) 0.77
Imbalance between apoptosis and cell proliferation during early stages of mammary gland carcinogenesis in ACI rats. Mutat Res (2010) 0.77
Genomic instability in liver cells caused by an LPS-induced bystander-like effect. PLoS One (2013) 0.76
Opportunities to integrate new approaches in genetic toxicology: an ILSI-HESI workshop report. Environ Mol Mutagen (2014) 0.76
Epigenetic bystander-like effects of stroke in somatic organs. Aging (Albany NY) (2012) 0.76
Age-dependent changes in DNA repair in radiation-exposed mice. Radiat Res (2014) 0.76
A new use for transgenic plants--environmental biomonitors. Biotechnol Genet Eng Rev (2003) 0.76
Genetics and women's health issues--the commitment of EMS to women scientists and gender-associated disease topics. Environ Mol Mutagen (2010) 0.75