Published in PLoS Biol on July 27, 2010
Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny. Proc Biol Sci (2012) 2.68
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development. Genome Biol (2011) 2.18
Mesozoic retroposons reveal parrots as the closest living relatives of passerine birds. Nat Commun (2011) 1.47
The historical biogeography of Mammalia. Philos Trans R Soc Lond B Biol Sci (2011) 1.15
Rsx is a metatherian RNA with Xist-like properties in X-chromosome inactivation. Nature (2012) 1.08
A novel web-based TinT application and the chronology of the Primate Alu retroposon activity. BMC Evol Biol (2010) 1.01
Molecular cytogenetic and genomic insights into chromosomal evolution. Heredity (Edinb) (2011) 1.01
The Evolution of Brains from Early Mammals to Humans. Wiley Interdiscip Rev Cogn Sci (2012) 0.99
What can article-level metrics do for you? PLoS Biol (2013) 0.92
An Alu-based phylogeny of gibbons (hylobatidae). Mol Biol Evol (2012) 0.92
Estimating the rate of irreversibility in protein evolution. Genome Biol Evol (2012) 0.91
Retroviral envelope gene captures and syncytin exaptation for placentation in marsupials. Proc Natl Acad Sci U S A (2015) 0.88
The tammar wallaby major histocompatibility complex shows evidence of past genomic instability. BMC Genomics (2011) 0.88
Disentangling the relationship of the Australian marsupial orders using retrotransposon and evolutionary network analyses. Genome Biol Evol (2015) 0.85
Evolutionary histories of transposable elements in the genome of the largest living marsupial carnivore, the Tasmanian devil. Mol Biol Evol (2015) 0.82
Mammals from 'down under': a multi-gene species-level phylogeny of marsupial mammals (Mammalia, Metatheria). PeerJ (2015) 0.80
A comparative study of mammalian diversification pattern. Int J Biol Sci (2012) 0.80
Transposable elements: from DNA parasites to architects of metazoan evolution. Genes (Basel) (2012) 0.78
New insights into the evolution of the Trypanosoma cruzi clade provided by a new trypanosome species tightly linked to Neotropical Pteronotus bats and related to an Australian lineage of trypanosomes. Parasit Vectors (2015) 0.77
Evolution of mammalian sensorimotor cortex: thalamic projections to parietal cortical areas in Monodelphis domestica. Front Neuroanat (2015) 0.77
Isolation of Novel Trypanosomatid, Zelonia australiensis sp. nov. (Kinetoplastida: Trypanosomatidae) Provides Support for a Gondwanan Origin of Dixenous Parasitism in the Leishmaniinae. PLoS Negl Trop Dis (2017) 0.77
U6 snRNA Pseudogenes: Markers of Retrotransposition Dynamics in Mammals. Mol Biol Evol (2015) 0.77
Expansion of CORE-SINEs in the genome of the Tasmanian devil. BMC Genomics (2012) 0.76
Germline viral "fossils" guide in silico reconstruction of a mid-Cenozoic era marsupial adeno-associated virus. Sci Rep (2016) 0.75
Aerobic power, huddling and the efficiency of torpor in the South American marsupial, Dromiciops gliroides. Biol Open (2012) 0.75
The Transcriptomic Evolution of Mammalian Pregnancy: Gene Expression Innovations in Endometrial Stromal Fibroblasts. Genome Biol Evol (2016) 0.75
Jumping genes reveal kangaroos' origins. PLoS Biol (2010) 0.75
A retroposon-based view on the temporal differentiation of sex chromosomes. Mob Genet Elements (2012) 0.75
RUNX2 repeat variation does not drive craniofacial diversity in marsupials. BMC Evol Biol (2017) 0.75
Skeleton of an unusual, cat-sized marsupial relative (Metatheria: Marsupialiformes) from the middle Eocene (Lutetian: 44-43 million years ago) of Turkey. PLoS One (2017) 0.75
Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences. Nature (2007) 7.91
Genome analysis of the platypus reveals unique signatures of evolution. Nature (2008) 5.74
An Early Cretaceous tribosphenic mammal and metatherian evolution. Science (2003) 4.07
Retroposed elements as archives for the evolutionary history of placental mammals. PLoS Biol (2006) 3.42
Recent advances in South American mammalian paleontology. Trends Ecol Evol (1998) 2.67
A phylogenetic foundation for comparative mammalian genomics. Genome Inform (2001) 2.16
Nuclear gene sequences provide evidence for the monophyly of australidelphian marsupials. Mol Phylogenet Evol (2003) 2.04
The root of the mammalian tree inferred from whole mitochondrial genomes. Mol Phylogenet Evol (2003) 1.89
Marsupial relationships and a timeline for marsupial radiation in South Gondwana. Gene (2004) 1.81
Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica. Genome Res (2007) 1.79
SINEs of speciation: tracking lineages with retroposons. Trends Ecol Evol (2004) 1.64
Parsimony, likelihood, and the role of models in molecular phylogenetics. Mol Biol Evol (2000) 1.60
SINEs of a nearly perfect character. Syst Biol (2006) 1.59
Mosaic retroposon insertion patterns in placental mammals. Genome Res (2009) 1.34
Combined mitochondrial and nuclear DNA sequences resolve the interrelations of the major Australasian marsupial radiations. Syst Biol (2006) 1.29
Waves of genomic hitchhikers shed light on the evolution of gamebirds (Aves: Galliformes). BMC Evol Biol (2007) 1.28
Australia's oldest marsupial fossils and their biogeographical implications. PLoS One (2008) 1.25
Resolution among major placental mammal interordinal relationships with genome data imply that speciation influenced their earliest radiations. BMC Evol Biol (2008) 1.25
Mammalian retroposons integrate at kinkable DNA sites. J Biomol Struct Dyn (1998) 1.17
Automated scanning for phylogenetically informative transposed elements in rodents. Syst Biol (2006) 1.06
Family-level relationships among the Australasian marsupial "herbivores" (Diprotodontia: Koala, wombats, kangaroos and possums). Mol Phylogenet Evol (2007) 1.01
Newly discovered young CORE-SINEs in marsupial genomes. Gene (2007) 0.91
The origin of the Australasian marsupial fauna and the phylogenetic affinities of the enigmatic monito del monte and marsupial mole. Proc Biol Sci (1998) 0.88
Molecular systematics of marsupials based on the rRNA 12S mitochondrial gene: the phylogeny of didelphimorphia and of the living fossil microbiotheriid Dromiciops gliroides thomas. Mol Phylogenet Evol (1999) 0.86
Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus. Proc Natl Acad Sci U S A (2002) 7.04
Genome analysis of the platypus reveals unique signatures of evolution. Nature (2008) 5.74
RNomics in Escherichia coli detects new sRNA species and indicates parallel transcriptional output in bacteria. Nucleic Acids Res (2003) 3.78
Retroposed elements as archives for the evolutionary history of placental mammals. PLoS Biol (2006) 3.42
Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea. Nucleic Acids Res (2003) 2.44
Evolutionary history of 7SL RNA-derived SINEs in Supraprimates. Trends Genet (2007) 2.00
RNomics: identification and function of small, non-messenger RNAs. Curr Opin Chem Biol (2002) 1.96
Retrocopy contributions to the evolution of the human genome. BMC Genomics (2008) 1.95
CD303 (BDCA-2) signals in plasmacytoid dendritic cells via a BCR-like signalosome involving Syk, Slp65 and PLCgamma2. Eur J Immunol (2007) 1.90
RNomics in Archaea reveals a further link between splicing of archaeal introns and rRNA processing. Nucleic Acids Res (2002) 1.89
Experimental RNomics: identification of 140 candidates for small non-messenger RNAs in the plant Arabidopsis thaliana. Curr Biol (2002) 1.85
Deletion of the MBII-85 snoRNA gene cluster in mice results in postnatal growth retardation. PLoS Genet (2007) 1.82
Alu-SINE exonization: en route to protein-coding function. Mol Biol Evol (2005) 1.81
Primate jumping genes elucidate strepsirrhine phylogeny. Proc Natl Acad Sci U S A (2004) 1.78
Multiple molecular evidences for a living mammalian fossil. Proc Natl Acad Sci U S A (2007) 1.74
Identification of small non-coding RNAs from mitochondria and chloroplasts. Nucleic Acids Res (2006) 1.69
RNomics in Drosophila melanogaster: identification of 66 candidates for novel non-messenger RNAs. Nucleic Acids Res (2003) 1.61
Evolution of small nucleolar RNAs in nematodes. Nucleic Acids Res (2006) 1.58
On BC1 RNA and the fragile X mental retardation protein. Proc Natl Acad Sci U S A (2008) 1.56
Mesozoic retroposons reveal parrots as the closest living relatives of passerine birds. Nat Commun (2011) 1.47
Plasmacytoid dendritic cells: from specific surface markers to specific cellular functions. Hum Immunol (2002) 1.46
The seroprevalence and seroincidence of enterovirus71 infection in infants and children in Ho Chi Minh City, Viet Nam. PLoS One (2011) 1.39
Functional persistence of exonized mammalian-wide interspersed repeat elements (MIRs). Genome Res (2007) 1.36
Mosaic retroposon insertion patterns in placental mammals. Genome Res (2009) 1.34
Identification of differentially expressed small non-protein-coding RNAs in Staphylococcus aureus displaying both the normal and the small-colony variant phenotype. J Mol Med (Berl) (2010) 1.32
From "junk" to gene: curriculum vitae of a primate receptor isoform gene. J Mol Biol (2004) 1.30
Inhibitory effect of naked neural BC1 RNA or BC200 RNA on eukaryotic in vitro translation systems is reversed by poly(A)-binding protein (PABP). J Mol Biol (2005) 1.29
Waves of genomic hitchhikers shed light on the evolution of gamebirds (Aves: Galliformes). BMC Evol Biol (2007) 1.28
Poly(A)-binding protein is associated with neuronal BC1 and BC200 ribonucleoprotein particles. J Mol Biol (2002) 1.26
Plasmacytoid dendritic cells accumulate in spleens from chronically HIV-infected patients but barely participate in interferon-alpha expression. Blood (2009) 1.24
Exonization of transposed elements: A challenge and opportunity for evolution. Biochimie (2011) 1.23
Rodent evolution: back to the root. Mol Biol Evol (2010) 1.19
Application of housekeeping npcRNAs for quantitative expression analysis of human transcriptome by real-time PCR. RNA (2009) 1.17
A novel class of mammalian-specific tailless retropseudogenes. Genome Res (2004) 1.13
CD141+ dendritic cells produce prominent amounts of IFN-α after dsRNA recognition and can be targeted via DEC-205 in humanized mice. Blood (2013) 1.12
Retroposed SNOfall--a mammalian-wide comparison of platypus snoRNAs. Genome Res (2008) 1.11
Spatial codes in dendritic BC1 RNA. J Cell Biol (2006) 1.08
Identification of an evolutionarily divergent U11 small nuclear ribonucleoprotein particle in Drosophila. Proc Natl Acad Sci U S A (2004) 1.07
Automated scanning for phylogenetically informative transposed elements in rodents. Syst Biol (2006) 1.06
Experimental identification and characterization of 97 novel npcRNA candidates in Salmonella enterica serovar Typhi. Nucleic Acids Res (2010) 1.06
Molecular cladistic markers in New World monkey phylogeny (Platyrrhini, Primates). Mol Phylogenet Evol (2003) 1.05
Neuronal untranslated BC1 RNA: targeted gene elimination in mice. Mol Cell Biol (2003) 1.03
Combined experimental and computational approach to identify non-protein-coding RNAs in the deep-branching eukaryote Giardia intestinalis. Nucleic Acids Res (2007) 1.03
Retroposed elements and their flanking regions resolve the evolutionary history of xenarthran mammals (armadillos, anteaters, and sloths). Mol Biol Evol (2007) 1.02
A novel web-based TinT application and the chronology of the Primate Alu retroposon activity. BMC Evol Biol (2010) 1.01
Two primate-specific small non-protein-coding RNAs in transgenic mice: neuronal expression, subcellular localization and binding partners. Nucleic Acids Res (2006) 0.96
Retroposon insertions and the chronology of avian sex chromosome evolution. Mol Biol Evol (2011) 0.96
An anthropoid-specific segmental duplication on human chromosome 1q22. Genomics (2006) 0.93
The genome of a Mesozoic paleovirus reveals the evolution of hepatitis B viruses. Nat Commun (2013) 0.93
Retroposon insertion patterns of neoavian birds: strong evidence for an extensive incomplete lineage sorting era. Mol Biol Evol (2012) 0.92
Beyond DNA: RNA editing and steps toward Alu exonization in primates. J Mol Biol (2008) 0.92
BDCA-2 signaling inhibits TLR-9-agonist-induced plasmacytoid dendritic cell activation and antigen presentation. Cell Immunol (2010) 0.91
A novel abundant family of retroposed elements (DAS-SINEs) in the nine-banded armadillo (Dasypus novemcinctus). Mol Biol Evol (2004) 0.90
A small RNA in testis and brain: implications for male germ cell development. J Cell Sci (2002) 0.89
Isolation and posttranscriptional modification analysis of native BC1 RNA from mouse brain. RNA Biol (2007) 0.89
A universal method for the study of CR1 retroposons in nonmodel bird genomes. Mol Biol Evol (2012) 0.89
The syndermatan phylogeny and the evolution of acanthocephalan endoparasitism as inferred from 18S rDNA sequences. Mol Phylogenet Evol (2003) 0.89
Neuronal MAP2 mRNA: species-dependent differential dendritic targeting competence. J Mol Biol (2004) 0.86
Isolation and characterization of living primary astroglial cells using the new GLAST-specific monoclonal antibody ACSA-1. Glia (2012) 0.85
Anti-inflammatory effects of Saccharomyces boulardii mediated by myeloid dendritic cells from patients with Crohn's disease and ulcerative colitis. Am J Physiol Gastrointest Liver Physiol (2011) 0.85
Origin and subset distribution of peripheral blood dendritic cells in patients with chronic graft-versus-host disease. Transplantation (2003) 0.84
Genomic impact of eukaryotic transposable elements. Mob DNA (2012) 0.84
Reply to Bagni: On BC1 RNA and the fragile X mental retardation protein. Proc Natl Acad Sci U S A (2008) 0.84
Frequent detection of thyroid peroxidase-specific IgG+ memory B cells in blood of patients with autoimmune thyroid disease. Eur J Immunol (2002) 0.84
Can ID repetitive elements serve as cis-acting dendritic targeting elements? An in vivo study. PLoS One (2007) 0.83
Retroposon insertions provide insights into deep lagomorph evolution. Mol Biol Evol (2010) 0.81
CpG motifs are efficient adjuvants for DNA cancer vaccines. J Invest Dermatol (2004) 0.81