PubRank

Amos Bairoch

Author PubWeight™ 391.62‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res 2003 52.80
2 UniProt: the Universal Protein knowledgebase. Nucleic Acids Res 2004 29.05
3 InterPro: the integrative protein signature database. Nucleic Acids Res 2008 25.07
4 The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res 2003 24.72
5 The Universal Protein Resource (UniProt): an expanding universe of protein information. Nucleic Acids Res 2006 22.70
6 InterPro, progress and status in 2005. Nucleic Acids Res 2005 17.53
7 ExPASy: The proteomics server for in-depth protein knowledge and analysis. Nucleic Acids Res 2003 17.39
8 IntAct: an open source molecular interaction database. Nucleic Acids Res 2004 15.02
9 The PROSITE database, its status in 2002. Nucleic Acids Res 2002 14.71
10 Automated annotation of microbial proteomes in SWISS-PROT. Comput Biol Chem 2003 13.44
11 New developments in the InterPro database. Nucleic Acids Res 2007 12.49
12 Recent improvements to the PROSITE database. Nucleic Acids Res 2004 11.89
13 Infrastructure for the life sciences: design and implementation of the UniProt website. BMC Bioinformatics 2009 8.87
14 PROSITE: a documented database using patterns and profiles as motif descriptors. Brief Bioinform 2002 8.77
15 The Swiss-Prot protein knowledgebase and ExPASy: providing the plant community with high quality proteomic data and tools. Plant Physiol Biochem 2004 8.59
16 The PROSITE database. Nucleic Acids Res 2006 8.11
17 PROSITE, a protein domain database for functional characterization and annotation. Nucleic Acids Res 2009 7.47
18 Calling on a million minds for community annotation in WikiProteins. Genome Biol 2008 7.11
19 UniProtKB/Swiss-Prot. Methods Mol Biol 2007 7.05
20 ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins. Nucleic Acids Res 2006 6.13
21 The 20 years of PROSITE. Nucleic Acids Res 2007 6.06
22 ScanProsite: a reference implementation of a PROSITE scanning tool. Appl Bioinformatics 2002 5.81
23 High-quality protein knowledge resource: SWISS-PROT and TrEMBL. Brief Bioinform 2002 4.95
24 IntEnz, the integrated relational enzyme database. Nucleic Acids Res 2004 4.65
25 A large-scale evaluation of computational protein function prediction. Nat Methods 2013 4.61
26 ProRule: a new database containing functional and structural information on PROSITE profiles. Bioinformatics 2005 3.41
27 HAMAP: a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot. Nucleic Acids Res 2008 3.29
28 Mass spectrometry in high-throughput proteomics: ready for the big time. Nat Methods 2010 2.91
29 InterPro: an integrated documentation resource for protein families, domains and functional sites. Brief Bioinform 2002 2.66
30 The Sulfinator: predicting tyrosine sulfation sites in protein sequences. Bioinformatics 2002 2.51
31 UniPathway: a resource for the exploration and annotation of metabolic pathways. Nucleic Acids Res 2011 2.45
32 Protein sequence databases. Curr Opin Chem Biol 2004 2.43
33 The human proteome project: current state and future direction. Mol Cell Proteomics 2011 2.34
34 The Chromosome-Centric Human Proteome Project for cataloging proteins encoded in the genome. Nat Biotechnol 2012 2.14
35 CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigens. Nucleic Acids Res 2008 2.14
36 The Swiss-Prot variant page and the ModSNP database: a resource for sequence and structure information on human protein variants. Hum Mutat 2004 1.97
37 Towards BioDBcore: a community-defined information specification for biological databases. Nucleic Acids Res 2010 1.97
38 FindPept, a tool to identify unmatched masses in peptide mass fingerprinting protein identification. Proteomics 2002 1.83
39 neXtProt: organizing protein knowledge in the context of human proteome projects. J Proteome Res 2012 1.80
40 neXtProt: a knowledge platform for human proteins. Nucleic Acids Res 2011 1.77
41 Metrics for the Human Proteome Project 2013-2014 and strategies for finding missing proteins. J Proteome Res 2013 1.76
42 Annotation of post-translational modifications in the Swiss-Prot knowledge base. Proteomics 2004 1.76
43 ViralZone: a knowledge resource to understand virus diversity. Nucleic Acids Res 2010 1.66
44 Protein variety and functional diversity: Swiss-Prot annotation in its biological context. C R Biol 2005 1.54
45 Annotating single amino acid polymorphisms in the UniProt/Swiss-Prot knowledgebase. Hum Mutat 2008 1.50
46 Tox-Prot, the toxin protein annotation program of the Swiss-Prot protein knowledgebase. Toxicon 2004 1.47
47 The UniProtKB/Swiss-Prot knowledgebase and its Plant Proteome Annotation Program. J Proteomics 2008 1.38
48 Towards BioDBcore: a community-defined information specification for biological databases. Database (Oxford) 2011 1.24
49 OpenFluDB, a database for human and animal influenza virus. Database (Oxford) 2010 1.20
50 Standard guidelines for the chromosome-centric human proteome project. J Proteome Res 2012 1.20
51 Plant protein annotation in the UniProt Knowledgebase. Plant Physiol 2005 1.15
52 Managing the data explosion. A report on the HUPO-PSI Workshop. August 2008, Amsterdam, The Netherlands. Proteomics 2009 1.04
53 A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17. J Proteome Res 2012 1.03
54 The human proteome project: Current state and future direction. Mol Cell Proteomics 2011 0.96
55 Industrial-scale proteomics: from liters of plasma to chemically synthesized proteins. Proteomics 2004 0.96
56 Human aldehyde dehydrogenase genes: alternatively spliced transcriptional variants and their suggested nomenclature. Pharmacogenet Genomics 2009 0.95
57 Functional identification of APIP as human mtnB, a key enzyme in the methionine salvage pathway. PLoS One 2012 0.91
58 A large-scale protein-function database. Nat Chem Biol 2010 0.86
59 Animal Toxins: How is Complexity Represented in Databases? Toxins (Basel) 2010 0.79
60 [From genome to proteome--aim of human proteomics]. Seikagaku 2004 0.77
61 Post-translational modifications: a challenge for proteomics and bioinformatics. Proteomics 2004 0.76
62 The application of bioinformatics to mass spectrometry. Proteomics 2002 0.75