PubRank

Cynthia M Sharma

Author PubWeight™ 64.56‹?›

Top papers

Rank Title Journal Year PubWeight™‹?›
1 CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III. Nature 2011 17.38
2 Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq. PLoS Genet 2008 5.23
3 Fast mapping of short sequences with mismatches, insertions and deletions using index structures. PLoS Comput Biol 2009 4.24
4 Small RNA binding to 5' mRNA coding region inhibits translational initiation. Mol Cell 2008 2.88
5 An experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803. Proc Natl Acad Sci U S A 2011 2.84
6 Deep sequencing-based discovery of the Chlamydia trachomatis transcriptome. Nucleic Acids Res 2009 2.20
7 An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs. EMBO J 2012 2.10
8 Identification of regulatory RNAs in Bacillus subtilis. Nucleic Acids Res 2010 1.99
9 Evidence for an autonomous 5' target recognition domain in an Hfq-associated small RNA. Proc Natl Acad Sci U S A 2010 1.69
10 High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates. PLoS Genet 2013 1.67
11 Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability. Proc Natl Acad Sci U S A 2009 1.66
12 Experimental discovery of small RNAs in Staphylococcus aureus reveals a riboregulator of central metabolism. Nucleic Acids Res 2010 1.49
13 The primary transcriptome of barley chloroplasts: numerous noncoding RNAs and the dominating role of the plastid-encoded RNA polymerase. Plant Cell 2012 1.47
14 Deep sequencing of Salmonella RNA associated with heterologous Hfq proteins in vivo reveals small RNAs as a major target class and identifies RNA processing phenotypes. RNA Biol 2009 1.42
15 Genome-wide transcriptome analysis of the plant pathogen Xanthomonas identifies sRNAs with putative virulence functions. Nucleic Acids Res 2011 1.25
16 Global regulatory functions of the Staphylococcus aureus endoribonuclease III in gene expression. PLoS Genet 2012 1.17
17 The transcriptional landscape of Chlamydia pneumoniae. Genome Biol 2011 1.16
18 Deep sequencing-based identification of small non-coding RNAs in Streptomyces coelicolor. RNA Biol 2011 1.15
19 Photooxidative stress-induced and abundant small RNAs in Rhodobacter sphaeroides. Mol Microbiol 2009 1.10
20 Deep sequencing uncovers numerous small RNAs on all four replicons of the plant pathogen Agrobacterium tumefaciens. RNA Biol 2012 1.08
21 Contribution of Hfq to photooxidative stress resistance and global regulation in Rhodobacter sphaeroides. Mol Microbiol 2011 1.05
22 Helicobacter pylori interferes with an embryonic stem cell micro RNA cluster to block cell cycle progression. Silence 2011 0.98
23 Functional characterization of the RNA chaperone Hfq in the opportunistic human pathogen Stenotrophomonas maltophilia. J Bacteriol 2012 0.95
24 In vivo and in vitro analysis of 6S RNA-templated short transcripts in Bacillus subtilis. RNA Biol 2011 0.94
25 An archaeal sRNA targeting cis- and trans-encoded mRNAs via two distinct domains. Nucleic Acids Res 2012 0.93
26 A variable homopolymeric G-repeat defines small RNA-mediated posttranscriptional regulation of a chemotaxis receptor in Helicobacter pylori. Proc Natl Acad Sci U S A 2014 0.92
27 Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis. BMC Genomics 2014 0.90
28 The architecture and ppGpp-dependent expression of the primary transcriptome of Salmonella Typhimurium during invasion gene expression. BMC Genomics 2012 0.90
29 Investigating CRISPR RNA Biogenesis and Function Using RNA-seq. Methods Mol Biol 2015 0.89
30 Target recognition, RNA methylation activity and transcriptional regulation of the Dictyostelium discoideum Dnmt2-homologue (DnmA). Nucleic Acids Res 2013 0.87
31 Transcriptome complexity and riboregulation in the human pathogen Helicobacter pylori. Front Cell Infect Microbiol 2012 0.86
32 Small RNAs of the Bradyrhizobium/Rhodopseudomonas lineage and their analysis. RNA Biol 2012 0.81
33 In vivo mapping of RNA-RNA interactions in Staphylococcus aureus using the endoribonuclease III. Methods 2013 0.78
34 Small RNAs in Bacterial Virulence and Communication. Microbiol Spectr 2016 0.77