Published in PLoS One on February 08, 2011
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Trait correlated expression combined with expression QTL analysis reveals biological pathways and candidate genes affecting water holding capacity of muscle. BMC Genomics (2008) 1.17
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Identification of expression QTL (eQTL) of genes expressed in porcine M. longissimus dorsi and associated with meat quality traits. BMC Genomics (2010) 0.99
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Systems-wide chicken DNA microarrays, gene expression profiling, and discovery of functional genes. Poult Sci (2003) 0.92
Genetical genomics: combining gene expression with marker genotypes in poultry. Poult Sci (2007) 0.87
Elevation of AKR7A2 (succinic semialdehyde reductase) in neurodegenerative disease. Brain Res (2001) 0.86
Isolation and characterization of a novel human thioredoxin-like gene hTLP19 encoding a secretory protein. Gene (2003) 0.85
Expression quantitative trait loci analysis of genes in porcine muscle by quantitative real-time RT-PCR compared to microarray data. Heredity (Edinb) (2010) 0.83
Genetical genomics in livestock: potentials and pitfalls. Anim Genet (2006) 0.81
Selective transcriptional profiling and data analysis strategies for expression quantitative trait loci mapping in outbred F2 populations. Genetics (2008) 0.79
Participation of the endoplasmic reticulum protein chaperone thio-oxidoreductase in gonadotropin-releasing hormone receptor expression at the plasma membrane. Braz J Med Biol Res (2009) 0.77
Semi-parametric genomic-enabled prediction of genetic values using reproducing kernel Hilbert spaces methods. Genet Res (Camb) (2010) 2.96
Nonparametric methods for incorporating genomic information into genetic evaluations: an application to mortality in broilers. Genetics (2008) 2.32
The transcriptome of human oocytes. Proc Natl Acad Sci U S A (2006) 1.70
Estimation of linkage disequilibrium in four US pig breeds. BMC Genomics (2012) 1.50
A Bayesian antedependence model for whole genome prediction. Genetics (2011) 1.45
Radial basis function regression methods for predicting quantitative traits using SNP markers. Genet Res (Camb) (2010) 1.28
Sexual differentiation of the zebra finch song system: potential roles for sex chromosome genes. BMC Neurosci (2009) 1.23
A powerful and flexible linear mixed model framework for the analysis of relative quantification RT-PCR data. Genomics (2009) 1.22
A comprehensive genetic approach for improving prediction of skin cancer risk in humans. Genetics (2012) 1.20
One hundred years of statistical developments in animal breeding. Annu Rev Anim Biosci (2014) 1.18
Exploring biological relationships between calving traits in primiparous cattle with a Bayesian recursive model. Genetics (2008) 1.13
A cDNA microarray from the telencephalon of juvenile male and female zebra finches. J Neurosci Methods (2004) 1.08
An ensemble-based approach to imputation of moderate-density genotypes for genomic selection with application to Angus cattle. Genet Res (Camb) (2012) 1.07
Evidence for a novel gene expression program in peripheral blood mononuclear cells from Mycobacterium avium subsp. paratuberculosis-infected cattle. Infect Immun (2003) 1.05
A general approach to mixed effects modeling of residual variances in generalized linear mixed models. Genet Sel Evol (2004) 1.05
Searching for recursive causal structures in multivariate quantitative genetics mixed models. Genetics (2010) 1.03
Reassessing design and analysis of two-colour microarray experiments using mixed effects models. Comp Funct Genomics (2005) 1.02
Marker-assisted prediction of non-additive genetic values. Genetica (2011) 1.02
Modeling relationships between calving traits: a comparison between standard and recursive mixed models. Genet Sel Evol (2010) 1.02
How do consumers deal with stoichiometric constraints? Lessons from functional genomics using Daphnia pulex. Mol Ecol (2011) 1.00
A large-scale study of differential gene expression in monocyte-derived macrophages infected with several strains of Mycobacterium avium subspecies paratuberculosis. Brief Funct Genomics (2010) 0.99
Enhanced gene expression in the forebrain of hatchling and juvenile male zebra finches. J Neurobiol (2005) 0.99
Application of support vector regression to genome-assisted prediction of quantitative traits. Theor Appl Genet (2011) 0.97
Genotype imputation accuracy in a F2 pig population using high density and low density SNP panels. BMC Genet (2013) 0.96
A primer on high-throughput computing for genomic selection. Front Genet (2011) 0.94
Design of microarray experiments for genetical genomics studies. Genetics (2006) 0.94
Predicting complex traits using a diffusion kernel on genetic markers with an application to dairy cattle and wheat data. Genet Sel Evol (2013) 0.94
Bovine mammary gene expression profiling using a cDNA microarray enhanced for mammary-specific transcripts. Physiol Genomics (2003) 0.94
Methods of tagSNP selection and other variables affecting imputation accuracy in swine. BMC Genet (2013) 0.93
Suppressing Aedes albopictus, an emerging vector of dengue and chikungunya viruses, by a novel combination of a monomolecular film and an insect-growth regulator. Am J Trop Med Hyg (2010) 0.93
Inferring quantitative trait pathways associated with bull fertility from a genome-wide association study. Front Genet (2013) 0.92
Identification of small molecules from human embryonic stem cells using metabolomics. Stem Cells Dev (2007) 0.91
Accuracy of Genome-Enabled Prediction in a Dairy Cattle Population using Different Cross-Validation Layouts. Front Genet (2012) 0.90
Transcriptome of local innate and adaptive immunity during early phase of infectious bronchitis viral infection. Viral Immunol (2006) 0.89
Identification of a novel gene set in human cumulus cells predictive of an oocyte's pregnancy potential. Fertil Steril (2012) 0.88
Is structural equation modeling advantageous for the genetic improvement of multiple traits? Genetics (2013) 0.87
Characterizing differential individual response to porcine reproductive and respiratory syndrome virus infection through statistical and functional analysis of gene expression. Front Genet (2013) 0.86
Glucocorticoid modulation of Bcl-2 family members A1 and Bak during delayed spontaneous apoptosis of bovine blood neutrophils. Endocrinology (2006) 0.86
Bayesian inference on genetic merit under uncertain paternity. Genet Sel Evol (2003) 0.85
Cumulative t-link threshold models for the genetic analysis of calving ease scores. Genet Sel Evol (2003) 0.85
Development of an adjuvant-free cashew nut allergy mouse model. Int Arch Allergy Immunol (2009) 0.85
On reference designs for microarray experiments. Stat Appl Genet Mol Biol (2005) 0.85
Gene expression profiling of peripheral blood mononuclear cells (PBMC) from Mycobacterium bovis infected cattle after in vitro antigenic stimulation with purified protein derivative of tuberculin (PPD). Vet Immunol Immunopathol (2006) 0.85
L2-Boosting algorithm applied to high-dimensional problems in genomic selection. Genet Res (Camb) (2010) 0.85
Accuracy of estimation of genomic breeding values in pigs using low-density genotypes and imputation. G3 (Bethesda) (2014) 0.85
Generation of expressed sequence tags from a normalized porcine skeletal muscle cDNA library. Anim Biotechnol (2002) 0.84
Identification of Carcass and Meat Quality QTL in an F(2) Duroc × Pietrain Pig Resource Population Using Different Least-Squares Analysis Models. Front Genet (2011) 0.84
Predicting expected progeny difference for marbling score in Angus cattle using artificial neural networks and Bayesian regression models. Genet Sel Evol (2013) 0.83
Development and testing of a high-density cDNA microarray resource for cattle. Physiol Genomics (2003) 0.83
Pharmacological zinc and phytase supplementation enhance metallothionein mRNA abundance and protein concentration in newly weaned pigs. J Nutr (2004) 0.82
Gene expression profiling of peripheral mononuclear cells in lame dairy cows with foot lesions. Vet Immunol Immunopathol (2007) 0.82
Evaluation of QTL for carcass merit and meat quality traits in a US commercial Duroc population. Meat Sci (2012) 0.82
Hierarchical Bayesian modeling of random and residual variance-covariance matrices in bivariate mixed effects models. Biom J (2010) 0.80
Application of alternative models to identify QTL for growth traits in an F2 Duroc x Pietrain pig resource population. BMC Genet (2010) 0.80
Microarray analysis of gene expression in blood neutrophils of parturient cows. Physiol Genomics (2004) 0.79
Long-term impacts of genome-enabled selection. J Appl Genet (2011) 0.79
Rapid screening for phenotype-genotype associations by linear transformations of genomic evaluations. BMC Bioinformatics (2014) 0.79
Hierarchical Bayesian modeling of heterogeneous cluster- and subject-level associations between continuous and binary outcomes in dairy production. Biom J (2012) 0.79
Selective transcriptional profiling and data analysis strategies for expression quantitative trait loci mapping in outbred F2 populations. Genetics (2008) 0.79
Gene expression profiling in hepatic tissue of newly weaned pigs fed pharmacological zinc and phytase supplemented diets. BMC Genomics (2008) 0.79
Searching for phenotypic causal networks involving complex traits: an application to European quail. Genet Sel Evol (2011) 0.78
Comparison of classification methods for detecting associations between SNPs and chick mortality. Genet Sel Evol (2009) 0.78
Generation of a multi-locus chicken introgression line to study the effects of genetic interactions on metabolic phenotypes in chickens. Front Genet (2012) 0.78
Dabigatran compared with warfarin for stroke prevention in atrial fibrillation. Ann Intern Med (2011) 0.78
Monte Carlo simulation to analyze the cost-benefit of radioactive seed localization versus wire localization for breast-conserving surgery in fee-for-service health care systems compared with accountable care organizations. AJR Am J Roentgenol (2014) 0.77
Liver functional genomics in beef cows on grazing systems: novel genes and pathways revealed. Physiol Genomics (2013) 0.77
Transcriptional profiling identifies differentially expressed genes in developing turkey skeletal muscle. BMC Genomics (2011) 0.77
Upregulation of imprinted genes in mice: an insight into the intensity of gene expression and the evolution of genomic imprinting. Epigenetics (2010) 0.77
Exploring causal networks of bovine milk fatty acids in a multivariate mixed model context. Genet Sel Evol (2014) 0.76
Estradiol and progesterone exhibit similar patterns of hepatic gene expression regulation in the bovine model. PLoS One (2013) 0.76
Effect of nonpayment for hospital-acquired, catheter-associated urinary tract infection. Ann Intern Med (2013) 0.75
A chromosomal investigation of some European Leiodidae (Coleoptera), with particular focus on Spanish subterranean Leptodirini. Comp Cytogenet (2012) 0.75
Guidance to providers on ordering medications. Health Aff (Millwood) (2010) 0.75
Zero-inflated Poisson regression models for QTL mapping applied to tick-resistance in a Gyr × Holstein F2 population. Genet Mol Biol (2011) 0.75
Developmental changes in the fetal pig transcriptome. Physiol Genomics (2004) 0.75
Computer physician order entry. Ann Intern Med (2004) 0.75