Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea.

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Published in PLoS Genet on August 18, 2011

Authors

Joelle Amselem1, Christina A Cuomo, Jan A L van Kan, Muriel Viaud, Ernesto P Benito, Arnaud Couloux, Pedro M Coutinho, Ronald P de Vries, Paul S Dyer, Sabine Fillinger, Elisabeth Fournier, Lilian Gout, Matthias Hahn, Linda Kohn, Nicolas Lapalu, Kim M Plummer, Jean-Marc Pradier, Emmanuel Quévillon, Amir Sharon, Adeline Simon, Arjen ten Have, Bettina Tudzynski, Paul Tudzynski, Patrick Wincker, Marion Andrew, Véronique Anthouard, Ross E Beever, Rolland Beffa, Isabelle Benoit, Ourdia Bouzid, Baptiste Brault, Zehua Chen, Mathias Choquer, Jérome Collémare, Pascale Cotton, Etienne G Danchin, Corinne Da Silva, Angélique Gautier, Corinne Giraud, Tatiana Giraud, Celedonio Gonzalez, Sandrine Grossetete, Ulrich Güldener, Bernard Henrissat, Barbara J Howlett, Chinnappa Kodira, Matthias Kretschmer, Anne Lappartient, Michaela Leroch, Caroline Levis, Evan Mauceli, Cécile Neuvéglise, Birgitt Oeser, Matthew Pearson, Julie Poulain, Nathalie Poussereau, Hadi Quesneville, Christine Rascle, Julia Schumacher, Béatrice Ségurens, Adrienne Sexton, Evelyn Silva, Catherine Sirven, Darren M Soanes, Nicholas J Talbot, Matt Templeton, Chandri Yandava, Oded Yarden, Qiandong Zeng, Jeffrey A Rollins, Marc-Henri Lebrun, Marty Dickman

Author Affiliations

1: Unité de Recherche Génomique - Info, UR1164, INRA, Versailles, France. joelle.amselem@versailles.inra.fr

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Annotating genomes with massive-scale RNA sequencing. Genome Biol (2008) 7.73

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The genome sequence of the rice blast fungus Magnaporthe grisea. Nature (2005) 6.95

An evolving hierarchical family classification for glycosyltransferases. J Mol Biol (2003) 6.48

Metabolic reconstruction for metagenomic data and its application to the human microbiome. PLoS Comput Biol (2012) 6.27

Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88. Nat Biotechnol (2007) 6.21

Comparative functional genomics of the fission yeasts. Science (2011) 6.00

Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Nature (2009) 5.90

Phylogenomics revives traditional views on deep animal relationships. Curr Biol (2009) 5.89

The amsterdam declaration on fungal nomenclature. IMA Fungus (2011) 5.86

The genome of woodland strawberry (Fragaria vesca). Nat Genet (2010) 5.86

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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature (2010) 5.79

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Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis. Nature (2006) 5.52

Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina). Nat Biotechnol (2008) 5.38

The genomic basis of adaptive evolution in threespine sticklebacks. Nature (2012) 5.20

Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita. Nat Biotechnol (2008) 5.19

Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Nature (2006) 5.06

The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature (2011) 4.94

The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science (2012) 4.93

Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78. Nat Biotechnol (2004) 4.85