Analyses of the functional regions of DEAD-box RNA "helicases" with deletion and chimera constructs tested in vivo and in vitro.

PubWeight™: 0.89‹?›

🔗 View Article (PMID 21884706)

Published in J Mol Biol on August 23, 2011

Authors

Josette Banroques1, Olivier Cordin, Monique Doère, Patrick Linder, N Kyle Tanner

Author Affiliations

1: Institut de Biologie Physico-chimique, CNRS UPR9073, Paris 75005, France.

Articles citing this

Chloroplast RH3 DEAD box RNA helicases in maize and Arabidopsis function in splicing of specific group II introns and affect chloroplast ribosome biogenesis. Plant Physiol (2012) 0.98

The DEAD-box helicase eIF4A: paradigm or the odd one out? RNA Biol (2012) 0.95

The DEAD-box RNA helicase Dbp2 connects RNA quality control with repression of aberrant transcription. J Biol Chem (2012) 0.94

Rarely at rest: RNA helicases and their busy contributions to RNA degradation, regulation and quality control. RNA Biol (2012) 0.86

The DEAD-box helicase Ded1 from yeast is an mRNP cap-associated protein that shuttles between the cytoplasm and nucleus. Nucleic Acids Res (2014) 0.85

Autoinhibitory Interdomain Interactions and Subfamily-specific Extensions Redefine the Catalytic Core of the Human DEAD-box Protein DDX3. J Biol Chem (2015) 0.81

Formation of a Trimeric Xpo1-Ran[GTP]-Ded1 Exportin Complex Modulates ATPase and Helicase Activities of Ded1. PLoS One (2015) 0.78

Subsite-specific association of DEAD box RNA helicase DDX60 with the development and prognosis of oral squamous cell carcinoma. Oncotarget (2016) 0.78

Mechanism of BRG1 silencing in primary cancers. Oncotarget (2016) 0.78

Putative SF2 helicases of the early-branching eukaryote Giardia lamblia are involved in antigenic variation and parasite differentiation into cysts. BMC Microbiol (2012) 0.76

The Q Motif Is Involved in DNA Binding but Not ATP Binding in ChlR1 Helicase. PLoS One (2015) 0.76

Coupling between the DEAD-box RNA helicases Ded1p and eIF4A. Elife (2016) 0.75

Characterization of the mammalian DEAD-box protein DDX5 reveals functional conservation with S. cerevisiae ortholog Dbp2 in transcriptional control and glucose metabolism. RNA (2017) 0.75

Articles by these authors

The DEAD-box protein family of RNA helicases. Gene (2005) 6.10

DEAD-box proteins: the driving forces behind RNA metabolism. Nat Rev Mol Cell Biol (2004) 4.87

The Q motif: a newly identified motif in DEAD box helicases may regulate ATP binding and hydrolysis. Mol Cell (2003) 2.51

The newly discovered Q motif of DEAD-box RNA helicases regulates RNA-binding and helicase activity. EMBO J (2004) 1.78

Crystal structure of the human ATP-dependent splicing and export factor UAP56. Proc Natl Acad Sci U S A (2004) 1.54

Cartography of methicillin-resistant S. aureus transcripts: detection, orientation and temporal expression during growth phase and stress conditions. PLoS One (2010) 1.46

Belle is a Drosophila DEAD-box protein required for viability and in the germ line. Dev Biol (2005) 1.45

A type III-like restriction endonuclease functions as a major barrier to horizontal gene transfer in clinical Staphylococcus aureus strains. Proc Natl Acad Sci U S A (2010) 1.40

Has1p, a member of the DEAD-box family, is required for 40S ribosomal subunit biogenesis in Saccharomyces cerevisiae. Mol Microbiol (2004) 1.38

A type IV modification-dependent restriction enzyme SauUSI from Staphylococcus aureus subsp. aureus USA300. Nucleic Acids Res (2011) 1.31

The CodY pleiotropic repressor controls virulence in gram-positive pathogens. FEMS Immunol Med Microbiol (2011) 1.20

Unwinding single RNA molecules using helicases involved in eukaryotic translation initiation. J Mol Biol (2006) 1.17

A conserved phenylalanine of motif IV in superfamily 2 helicases is required for cooperative, ATP-dependent binding of RNA substrates in DEAD-box proteins. Mol Cell Biol (2008) 1.10

Characterization of the ATPase and unwinding activities of the yeast DEAD-box protein Has1p and the analysis of the roles of the conserved motifs. Nucleic Acids Res (2005) 1.09

Linear ubiquitin fusion to Rps31 and its subsequent cleavage are required for the efficient production and functional integrity of 40S ribosomal subunits. Mol Microbiol (2009) 1.07

Motif III in superfamily 2 "helicases" helps convert the binding energy of ATP into a high-affinity RNA binding site in the yeast DEAD-box protein Ded1. J Mol Biol (2009) 1.05

The CshA DEAD-box RNA helicase is important for quorum sensing control in Staphylococcus aureus. RNA Biol (2012) 1.05

A membrane transport defect leads to a rapid attenuation of translation initiation in Saccharomyces cerevisiae. Mol Cell (2004) 1.00

New range of vectors with a stringent 5-fluoroorotic acid-based counterselection system for generating mutants by allelic replacement in Staphylococcus aureus. Appl Environ Microbiol (2012) 0.96

The C-terminal region of the RNA helicase CshA is required for the interaction with the degradosome and turnover of bulk RNA in the opportunistic pathogen Staphylococcus aureus. RNA Biol (2015) 0.91

Membrane stress is coupled to a rapid translational control of gene expression in chlorpromazine-treated cells. Curr Genet (2007) 0.90

The putative RNA helicase Dbp6p functionally interacts with Rpl3p, Nop8p and the novel trans-acting Factor Rsa3p during biogenesis of 60S ribosomal subunits in Saccharomyces cerevisiae. Genetics (2004) 0.89

Sen34p depletion blocks tRNA splicing in vivo and delays rRNA processing. Biochem Biophys Res Commun (2005) 0.88

Power of yeast for analysis of eukaryotic translation initiation. J Biol Chem (2010) 0.86

Impact of oleic acid (cis-9-octadecenoic acid) on bacterial viability and biofilm production in Staphylococcus aureus. FEMS Microbiol Lett (2008) 0.86

Bioinformatics and biochemical methods to study the structural and functional elements of DEAD-box RNA helicases. Methods Mol Biol (2015) 0.81

DEAD-box RNA helicases in gram-positive RNA decay. Methods Enzymol (2012) 0.81

Leishmania infantum LeIF protein is an ATP-dependent RNA helicase and an eIF4A-like factor that inhibits translation in yeast. FEBS J (2006) 0.79

The biology of RNA helicases- modulation for life. Preface. Biochim Biophys Acta (2013) 0.77

Correction: Decay-Initiating Endoribonucleolytic Cleavage by RNase Y Is Kept under Tight Control via Sequence Preference and Sub-cellular Localisation. PLoS Genet (2016) 0.75