Published in BMC Genomics on September 05, 2012
Ankyrin domains across the Tree of Life. PeerJ (2014) 0.88
Isolation and characterization of Brachyspira spp. including "Brachyspira hampsonii" from lesser snow geese (Chen caerulescens caerulescens) in the Canadian Arctic. Microb Ecol (2013) 0.85
Brachyspira suanatina sp. nov., an enteropathogenic intestinal spirochaete isolated from pigs and mallards: genomic and phenotypic characteristics. BMC Microbiol (2015) 0.83
Analysis of Multiple Brachyspira hyodysenteriae Genomes Confirms That the Species Is Relatively Conserved but Has Potentially Important Strain Variation. PLoS One (2015) 0.82
The pathogenic intestinal spirochaete Brachyspira pilosicoli forms a diverse recombinant species demonstrating some local clustering of related strains and potential for zoonotic spread. Gut Pathog (2013) 0.82
Temperature and oxygen dependent metabolite utilization by Salmonella enterica serovars Derby and Mbandaka. PLoS One (2015) 0.81
Bacteroides isolated from four mammalian hosts lack host-specific 16S rRNA gene phylogeny and carbon and nitrogen utilization patterns. Microbiologyopen (2014) 0.76
Brachyspira pilosicoli-induced avian intestinal spirochaetosis. Microb Ecol Health Dis (2015) 0.75
The Exposed Proteomes of Brachyspira hyodysenteriae and B. pilosicoli. Front Microbiol (2016) 0.75
Brachyspira hyodysenteriae and B. pilosicoli Proteins Recognized by Sera of Challenged Pigs. Front Microbiol (2017) 0.75
Emergence of Brachyspira species and strains: reinforcing the need for surveillance. Porcine Health Manag (2015) 0.75
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol (2011) 220.97
Clustal W and Clustal X version 2.0. Bioinformatics (2007) 126.47
SOAP: short oligonucleotide alignment program. Bioinformatics (2008) 68.13
Genome sequence of Yersinia pestis, the causative agent of plague. Nature (2001) 14.36
Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica. Nat Genet (2003) 9.13
CRISPR--a widespread system that provides acquired resistance against phages in bacteria and archaea. Nat Rev Microbiol (2008) 8.91
Inoculation of pigs with Treponema hyodysenteriae (new species) and reproduction f the disease. Vet Med Small Anim Clin (1972) 6.45
Structure, function, and evolution of bacterial ATP-binding cassette systems. Microbiol Mol Biol Rev (2008) 5.97
Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps. Genome Biol (2010) 5.79
Multidrug-resistance efflux pumps - not just for resistance. Nat Rev Microbiol (2006) 5.18
Intestinal spirochaetosis. Br Med J (1967) 4.98
Phenotype microarrays for high-throughput phenotypic testing and assay of gene function. Genome Res (2001) 4.80
Reductive evolution of resident genomes. Trends Microbiol (1998) 4.38
AutoFACT: an automatic functional annotation and classification tool. BMC Bioinformatics (2005) 4.26
Iterative Correction of Reference Nucleotides (iCORN) using second generation sequencing technology. Bioinformatics (2010) 4.18
Nitrogen control in bacteria. Microbiol Rev (1995) 3.99
Ori-Finder: a web-based system for finding oriCs in unannotated bacterial genomes. BMC Bioinformatics (2008) 3.65
Genome rearrangement by replication-directed translocation. Nat Genet (2000) 3.45
Gene regulation of plasmid- and chromosome-determined inorganic ion transport in bacteria. Microbiol Rev (1992) 3.12
Diversity of microbial sialic acid metabolism. Microbiol Mol Biol Rev (2004) 3.11
Global phenotypic characterization of bacteria. FEMS Microbiol Rev (2008) 2.97
Genomic changes following host restriction in bacteria. Curr Opin Genet Dev (2004) 2.87
The phage abortive infection system, ToxIN, functions as a protein-RNA toxin-antitoxin pair. Proc Natl Acad Sci U S A (2009) 2.69
Biosynthesis of lipopolysaccharide O antigens. Trends Microbiol (1995) 2.65
Intestinal spirochetosis: morphological characterization and cultivation of the spirochete Brachyspira aalborgi gen. nov., sp. nov. J Clin Microbiol (1982) 2.50
Reduced virulence of group A streptococcal Tn916 mutants that do not produce streptolysin S. Infect Immun (1998) 2.44
Serpulina pilosicoli sp. nov., the agent of porcine intestinal spirochetosis. Int J Syst Bacteriol (1996) 2.14
Iron acquisition and virulence in Helicobacter pylori: a major role for FeoB, a high-affinity ferrous iron transporter. Mol Microbiol (2000) 2.08
The OmpA-like protein Loa22 is essential for leptospiral virulence. PLoS Pathog (2007) 1.93
Autoclaved liquid medium for propagation of Treponema hyodysenteriae. J Clin Microbiol (1986) 1.89
Cloning, expression, and sequencing of a cell surface antigen containing a leucine-rich repeat motif from Bacteroides forsythus ATCC 43037. Infect Immun (1998) 1.79
Protozoan predation, diversifying selection, and the evolution of antigenic diversity in Salmonella. Proc Natl Acad Sci U S A (2004) 1.66
Bacterial neuraminidase facilitates mucosal infection by participating in biofilm production. J Clin Invest (2006) 1.54
Major role for FeoB in Campylobacter jejuni ferrous iron acquisition, gut colonization, and intracellular survival. Infect Immun (2006) 1.52
Aspartate-specific peptidases in Salmonella typhimurium: mutants deficient in peptidase E. J Bacteriol (1984) 1.42
Genome sequence of the pathogenic intestinal spirochete brachyspira hyodysenteriae reveals adaptations to its lifestyle in the porcine large intestine. PLoS One (2009) 1.41
Experimental infection of newly weaned pigs with human and porcine strains of Serpulina pilosicoli. Infect Immun (1996) 1.39
Intestinal spirochaetes colonizing aborigines from communities in the remote north of Western Australia. Epidemiol Infect (1992) 1.37
Mechanism and Function of the Outer Membrane Channel TolC in Multidrug Resistance and Physiology of Enterobacteria. Front Microbiol (2011) 1.35
The early stage of bacterial genome-reductive evolution in the host. PLoS Pathog (2010) 1.35
Characterization of the Batl (Bacteroides aerotolerance) operon in Bacteroides fragilis: isolation of a B. fragilis mutant with reduced aerotolerance and impaired growth in in vivo model systems. Mol Microbiol (1999) 1.35
Pathogenicity of human and porcine intestinal spirochetes in one-day-old specific-pathogen-free chicks: an animal model of intestinal spirochetosis. Infect Immun (1995) 1.34
Cytotoxic effects of streptolysin o and streptolysin s enhance the virulence of poorly encapsulated group a streptococci. Infect Immun (2003) 1.34
Isolation of Serpulina pilosicoli from rectal biopsy specimens showing evidence of intestinal spirochetosis. J Clin Microbiol (1998) 1.33
Phenotypical characterisation of intestinal spirochaetes isolated from pigs. Res Vet Sci (1995) 1.31
Human intestinal spirochetosis--a review. Ger Med Sci (2010) 1.25
Molecular analysis of the 3,6-dideoxyhexose pathway genes of Yersinia pseudotuberculosis serogroup IIA. J Bacteriol (1993) 1.25
Identification of a Treponema denticola OppA homologue that binds host proteins present in the subgingival environment. Infect Immun (2000) 1.23
Crystal structures of bacterial lipoprotein localization factors, LolA and LolB. EMBO J (2003) 1.21
The prevalence of Serpulina pilosicoli in humans and domestic animals in the Eastern Highlands of Papua New Guinea. Epidemiol Infect (1997) 1.19
Involvement of Streptococcus gordonii beta-glucoside metabolism systems in adhesion, biofilm formation, and in vivo gene expression. J Bacteriol (2004) 1.19
TonB is required for intracellular growth and virulence of Shigella dysenteriae. Infect Immun (2000) 1.18
Mycobacterium tuberculosis with disruption in genes encoding the phosphate binding proteins PstS1 and PstS2 is deficient in phosphate uptake and demonstrates reduced in vivo virulence. Infect Immun (2005) 1.18
Identification of Serpulina species associated with porcine colitis by biochemical analysis and PCR. J Clin Microbiol (1997) 1.18
Chemotactic response to mucin by Serpulina hyodysenteriae and other porcine spirochetes: potential role in intestinal colonization. Infect Immun (1994) 1.17
Extensive proliferation of transposable elements in heritable bacterial symbionts. J Bacteriol (2007) 1.14
Physical and genetic map of the Serpulina hyodysenteriae B78T chromosome. J Bacteriol (1994) 1.11
A glutamine transport gene, glnQ, is required for fibronectin adherence and virulence of group B streptococci. Infect Immun (2002) 1.11
Prevalence, risk factors and molecular epidemiology of Brachyspira pilosicoli in humans on the island of Bali, Indonesia. J Med Microbiol (2004) 1.09
Inactivation of the pst system reduces the virulence of an avian pathogenic Escherichia coli O78 strain. Infect Immun (2005) 1.09
Recognition of two new species of intestinal spirochetes: Serpulina intermedia sp. nov. and Serpulina murdochii sp. nov. Int J Syst Bacteriol (1997) 1.09
Association of Treponema hyodysenteriae with porcine intestinal mucosa. J Gen Microbiol (1988) 1.07
Population genetic analysis of Serpulina pilosicoli and its molecular epidemiology in villages in the eastern Highlands of Papua New Guinea. Int J Syst Bacteriol (1998) 1.07
Genetic and phenotypic characterization of intestinal spirochetes colonizing chickens and allocation of known pathogenic isolates to three distinct genetic groups. J Clin Microbiol (1997) 1.06
The potassium transporter Trk and external potassium modulate Salmonella enterica protein secretion and virulence. Infect Immun (2008) 1.06
The 23S/5S ribosomal RNA genes (rrl/rrf) are separate from the 16S ribosomal RNA gene (rrs) in Borrelia burgdorferi, the aetiological agent of Lyme disease. J Gen Microbiol (1992) 1.05
A novel enteropathogenic, strongly haemolytic spirochaete isolated from pig and mallard, provisionally designated 'Brachyspira suanatina' sp. nov. Environ Microbiol (2007) 1.05
Potential for zoonotic transmission of Brachyspira pilosicoli. Emerg Infect Dis (2006) 1.03
The TolC protein of Legionella pneumophila plays a major role in multi-drug resistance and the early steps of host invasion. PLoS One (2009) 0.99
Flip-flop around the origin and terminus of replication in prokaryotic genomes. Genome Biol (2001) 0.98
Development of a multilocus sequence typing scheme for intestinal spirochaetes within the genus Brachyspira. Microbiology (2007) 0.96
The complete genome sequence of the pathogenic intestinal spirochete Brachyspira pilosicoli and comparison with other Brachyspira genomes. PLoS One (2010) 0.95
Involvement of the AcrAB-TolC efflux pump in the resistance, fitness, and virulence of Enterobacter cloacae. Antimicrob Agents Chemother (2012) 0.92
Brachyspira intermedia strain diversity and relationships to the other indole-positive Brachyspira species. Vet Microbiol (2009) 0.90
A bacterial genome in transition--an exceptional enrichment of IS elements but lack of evidence for recent transposition in the symbiont Amoebophilus asiaticus. BMC Evol Biol (2011) 0.90
The intestinal spirochete Brachyspira pilosicoli attaches to cultured Caco-2 cells and induces pathological changes. PLoS One (2009) 0.90
A mgl-like operon in Treponema pallidum, the syphilis spirochete. Gene (1996) 0.89
Serpulina alvinipulli sp. nov., a new Serpulina species that is enteropathogenic for chickens. Int J Syst Bacteriol (1998) 0.89
Attraction of Brachyspira pilosicoli to mucin. Microbiology (2009) 0.87
Complete genome sequence of Brachyspira intermedia reveals unique genomic features in Brachyspira species and phage-mediated horizontal gene transfer. BMC Genomics (2011) 0.87
Organization of the ribosomal RNA genes in Treponema phagedenis and Treponema pallidum. Microbiol Immunol (1992) 0.85
Complete genome sequence of Brachyspira murdochii type strain (56-150). Stand Genomic Sci (2010) 0.85
The Listeria monocytogenes gene ctpA encodes a putative P-type ATPase involved in copper transport. Mol Gen Genet (1997) 0.85
Colonic spirochetosis in animals and humans. J Food Prot (2005) 0.85
Canine intestinal spirochetes consist of Serpulina pilosicoli and a newly identified group provisionally designated "Serpulina canis" sp. nov. J Clin Microbiol (1998) 0.84
Assessment of diagnostics and antimicrobial susceptibility testing of Brachyspira species using a ring test. Vet Microbiol (2005) 0.84
Colonization and risk factors for Brachyspira aalborgi and Brachyspira pilosicoli in humans and dogs on tea estates in Assam, India. Epidemiol Infect (2004) 0.84
Role of polyamine transport in Streptococcus pneumoniae response to physiological stress and murine septicemia. Microb Pathog (2008) 0.83
Neuraminidase (sialidase) activity of Haemophilus parasuis. FEMS Microbiol Lett (1997) 0.82
TolC affects virulence gene expression in Vibrio cholerae. J Bacteriol (2011) 0.82
Molecular characterization of a group of proteins containing ankyrin repeats in Orientia tsutsugamushi. Ann N Y Acad Sci (2005) 0.82
Identification and genetic fingerprinting of Brachyspira species. J Microbiol Methods (2007) 0.79
Comparison of flanking regions of the 5S ribosomal ribonucleic acid genes in Leptospira biflexa and Leptospira interrogans. Chem Pharm Bull (Tokyo) (1992) 0.77
A human gut microbial gene catalogue established by metagenomic sequencing. Nature (2010) 43.63
The minimum information about a genome sequence (MIGS) specification. Nat Biotechnol (2008) 31.04
Enterotypes of the human gut microbiome. Nature (2011) 24.36
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi. Nat Genet (2008) 19.97
ACT: the Artemis Comparison Tool. Bioinformatics (2005) 17.91
Evolution of MRSA during hospital transmission and intercontinental spread. Science (2010) 13.34
Prepublication data sharing. Nature (2009) 12.24
Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database. Bioinformatics (2008) 9.17
Rapid pneumococcal evolution in response to clinical interventions. Science (2011) 9.09
Complete genomes of two clinical Staphylococcus aureus strains: evidence for the rapid evolution of virulence and drug resistance. Proc Natl Acad Sci U S A (2004) 8.95
The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome. Nat Genet (2006) 8.02
Salmonella enterica serovar typhimurium exploits inflammation to compete with the intestinal microbiota. PLoS Biol (2007) 7.58
Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei. Proc Natl Acad Sci U S A (2004) 7.30
Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study. Lancet Infect Dis (2012) 7.18
The complete genome sequence of Mycobacterium bovis. Proc Natl Acad Sci U S A (2003) 6.79
Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study. Lancet Infect Dis (2012) 6.64
Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes. PLoS Genet (2006) 6.43
Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak. N Engl J Med (2012) 6.36
GeneDB: a resource for prokaryotic and eukaryotic organisms. Nucleic Acids Res (2004) 6.30
Meticillin-resistant Staphylococcus aureus with a novel mecA homologue in human and bovine populations in the UK and Denmark: a descriptive study. Lancet Infect Dis (2011) 6.08
The genome of the blood fluke Schistosoma mansoni. Nature (2009) 5.94
Multidrug-resistant Salmonella enterica serovar paratyphi A harbors IncHI1 plasmids similar to those found in serovar typhi. J Bacteriol (2007) 5.88
Evidence for several waves of global transmission in the seventh cholera pandemic. Nature (2011) 5.62
Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Science (2010) 5.56
DNAPlotter: circular and linear interactive genome visualization. Bioinformatics (2008) 5.49
Dominant and diet-responsive groups of bacteria within the human colonic microbiota. ISME J (2010) 5.43
Microevolution and history of the plague bacillus, Yersinia pestis. Proc Natl Acad Sci U S A (2004) 5.04
Microbiology in the post-genomic era. Nat Rev Microbiol (2008) 4.88
Whole-genome sequencing to identify transmission of Mycobacterium abscessus between patients with cystic fibrosis: a retrospective cohort study. Lancet (2013) 4.75
Routine use of microbial whole genome sequencing in diagnostic and public health microbiology. PLoS Pathog (2012) 4.69
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses. BMC Biol (2014) 4.39
Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data. Bioinformatics (2011) 4.31
Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands. Bioinformatics (2006) 4.27
Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants. Genome Res (2009) 4.12
Emergence and global spread of epidemic healthcare-associated Clostridium difficile. Nat Genet (2012) 4.10
Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype. Genome Res (2009) 3.99
Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans. Nat Genet (2013) 3.89
The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants. Genome Biol (2008) 3.85
Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice. PLoS Pathog (2012) 3.81
Genome plasticity of BCG and impact on vaccine efficacy. Proc Natl Acad Sci U S A (2007) 3.73
Comparative genome and phenotypic analysis of Clostridium difficile 027 strains provides insight into the evolution of a hypervirulent bacterium. Genome Biol (2009) 3.66
Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens. Genome Biol (2009) 3.63
Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome. J Bacteriol (2007) 3.62
Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287/91 provides insights into evolutionary and host adaptation pathways. Genome Res (2008) 3.54
Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer. Genome Res (2007) 3.45
Antibiotic treatment of clostridium difficile carrier mice triggers a supershedder state, spore-mediated transmission, and severe disease in immunocompromised hosts. Infect Immun (2009) 3.36
Comparative genomic structure of prokaryotes. Annu Rev Genet (2004) 3.34
The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081. PLoS Genet (2006) 3.33
Sequencing and analysis of the genome of the Whipple's disease bacterium Tropheryma whipplei. Lancet (2003) 3.30
Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis. Genome Res (2008) 3.26
BamView: viewing mapped read alignment data in the context of the reference sequence. Bioinformatics (2010) 3.24
Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe. Nat Genet (2012) 3.22
Evolutionary dynamics of Clostridium difficile over short and long time scales. Proc Natl Acad Sci U S A (2010) 3.18
High-throughput clone library analysis of the mucosa-associated microbiota reveals dysbiosis and differences between inflamed and non-inflamed regions of the intestine in inflammatory bowel disease. BMC Microbiol (2011) 3.11
Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69. J Bacteriol (2008) 3.10
Extensive DNA inversions in the B. fragilis genome control variable gene expression. Science (2005) 3.08
Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosa. Genome Res (2008) 3.03
Sequencing ancient calcified dental plaque shows changes in oral microbiota with dietary shifts of the Neolithic and Industrial revolutions. Nat Genet (2013) 3.03
The genome of Rhizobium leguminosarum has recognizable core and accessory components. Genome Biol (2006) 2.93
A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi. PLoS Genet (2009) 2.87
Intracontinental spread of human invasive Salmonella Typhimurium pathovariants in sub-Saharan Africa. Nat Genet (2012) 2.86
Complete genome sequence and lytic phase transcription profile of a Coccolithovirus. Science (2005) 2.86
Genome sequence of a recently emerged, highly transmissible, multi-antibiotic- and antiseptic-resistant variant of methicillin-resistant Staphylococcus aureus, sequence type 239 (TW). J Bacteriol (2009) 2.81
Microevolution of extensively drug-resistant tuberculosis in Russia. Genome Res (2012) 2.81
The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients. J Bacteriol (2008) 2.71
Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes. Genome Res (2007) 2.67
Whole-genome sequencing for rapid susceptibility testing of M. tuberculosis. N Engl J Med (2013) 2.63
Population genomics of post-vaccine changes in pneumococcal epidemiology. Nat Genet (2013) 2.63
A bimodal pattern of relatedness between the Salmonella Paratyphi A and Typhi genomes: convergence or divergence by homologous recombination? Genome Res (2006) 2.62
Reverse transcriptase-mediated tropism switching in Bordetella bacteriophage. Science (2002) 2.62
Development of a miniaturised microarray-based assay for the rapid identification of antimicrobial resistance genes in Gram-negative bacteria. Int J Antimicrob Agents (2008) 2.59
A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic. Genome Res (2013) 2.59
Proteomic and microarray characterization of the AggR regulon identifies a pheU pathogenicity island in enteroaggregative Escherichia coli. Mol Microbiol (2006) 2.58
Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities. ISME J (2010) 2.55
Rapid bacterial whole-genome sequencing to enhance diagnostic and public health microbiology. JAMA Intern Med (2013) 2.52
Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81. J Bacteriol (2008) 2.51
Composition, acquisition, and distribution of the Vi exopolysaccharide-encoding Salmonella enterica pathogenicity island SPI-7. J Bacteriol (2003) 2.50
The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans. Proc Natl Acad Sci U S A (2009) 2.48
Meningococcal genetic variation mechanisms viewed through comparative analysis of serogroup C strain FAM18. PLoS Genet (2006) 2.47
Wolbachia variability and host effects on crossing type in Culex mosquitoes. Nature (2005) 2.47
Complete genome sequence of uropathogenic Proteus mirabilis, a master of both adherence and motility. J Bacteriol (2008) 2.47
The role of prophage-like elements in the diversity of Salmonella enterica serovars. J Mol Biol (2004) 2.45
Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing. Nat Genet (2012) 2.44
Multireplicon genome architecture of Lactobacillus salivarius. Proc Natl Acad Sci U S A (2006) 2.43
Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis. PLoS One (2009) 2.38
The complete nucleotide sequence of the resistance plasmid R478: defining the backbone components of incompatibility group H conjugative plasmids through comparative genomics. Plasmid (2004) 2.36
The Orientia tsutsugamushi genome reveals massive proliferation of conjugative type IV secretion system and host-cell interaction genes. Proc Natl Acad Sci U S A (2007) 2.35
Re-annotation and re-analysis of the Campylobacter jejuni NCTC11168 genome sequence. BMC Genomics (2007) 2.31
Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates. Genome Res (2007) 2.29
Genome evolution of Wolbachia strain wPip from the Culex pipiens group. Mol Biol Evol (2008) 2.26
A simple method for directional transcriptome sequencing using Illumina technology. Nucleic Acids Res (2009) 2.19
Complete sequence and organization of pBtoxis, the toxin-coding plasmid of Bacillus thuringiensis subsp. israelensis. Appl Environ Microbiol (2002) 2.18
Emergence of the Asian 1 genotype of dengue virus serotype 2 in viet nam: in vivo fitness advantage and lineage replacement in South-East Asia. PLoS Negl Trop Dis (2010) 2.17
The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation. Genome Res (2005) 2.12
A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407. J Bacteriol (2010) 2.08
Whole genome sequencing identifies zoonotic transmission of MRSA isolates with the novel mecA homologue mecC. EMBO Mol Med (2013) 2.07
Inferring patient to patient transmission of Mycobacterium tuberculosis from whole genome sequencing data. BMC Infect Dis (2013) 2.01
Application of next-generation sequencing technologies in virology. J Gen Virol (2012) 1.98