Published in J Gen Virol on May 30, 2012
Mutational and fitness landscapes of an RNA virus revealed through population sequencing. Nature (2013) 2.68
Next generation sequencing of viral RNA genomes. BMC Genomics (2013) 2.10
A leafhopper-transmissible DNA virus with novel evolutionary lineage in the family geminiviridae implicated in grapevine redleaf disease by next-generation sequencing. PLoS One (2013) 1.57
European molecular epidemiology and strain diversity of feline calicivirus. Vet Rec (2016) 1.41
A novel procedure on next generation sequencing data analysis using text mining algorithm. BMC Bioinformatics (2016) 1.39
Finding the lost treasures in exome sequencing data. Trends Genet (2013) 1.36
Next-generation sequencing of cervical DNA detects human papillomavirus types not detected by commercial kits. Virol J (2012) 1.08
The detection of microRNA associated with Alzheimer's disease in biological fluids using next-generation sequencing technologies. Front Genet (2013) 1.08
Deep sequencing: becoming a critical tool in clinical virology. J Clin Virol (2014) 1.07
Genomic and functional characteristics of human cytomegalovirus revealed by next-generation sequencing. Viruses (2014) 1.05
Virus evolution and transmission in an ever more connected world. Proc Biol Sci (2015) 1.03
Informatics for RNA Sequencing: A Web Resource for Analysis on the Cloud. PLoS Comput Biol (2015) 0.97
Comprehensive human virus screening using high-throughput sequencing with a user-friendly representation of bioinformatics analysis: a pilot study. J Clin Microbiol (2014) 0.96
Historical perspective, development and applications of next-generation sequencing in plant virology. Viruses (2014) 0.95
Large-scale spatial and temporal genetic diversity of feline calicivirus. J Virol (2012) 0.92
Deep sequencing analysis of viral infection and evolution allows rapid and detailed characterization of viral mutant spectrum. Bioinformatics (2015) 0.91
Transcriptional profiling of the host cell response to feline immunodeficiency virus infection. Virol J (2014) 0.90
Profile hidden Markov models for the detection of viruses within metagenomic sequence data. PLoS One (2014) 0.89
Integrative Analysis of the microRNAome and Transcriptome Illuminates the Response of Susceptible Rice Plants to Rice Stripe Virus. PLoS One (2016) 0.89
A Pan-HIV Strategy for Complete Genome Sequencing. J Clin Microbiol (2015) 0.87
Detection of arboviruses and other micro-organisms in experimentally infected mosquitoes using massively parallel sequencing. PLoS One (2013) 0.87
Metagenomic profile of the viral communities in Rhipicephalus spp. ticks from Yunnan, China. PLoS One (2015) 0.86
Transcriptome analysis of duck liver and identification of differentially expressed transcripts in response to duck hepatitis A virus genotype C infection. PLoS One (2013) 0.86
Sequence recombination and conservation of Varroa destructor virus-1 and deformed wing virus in field collected honey bees (Apis mellifera). PLoS One (2013) 0.86
Alternative applications for distinct RNA sequencing strategies. Brief Bioinform (2014) 0.85
Update on hepatitis B and C virus diagnosis. World J Virol (2015) 0.85
RAMICS: trainable, high-speed and biologically relevant alignment of high-throughput sequencing reads to coding DNA. Nucleic Acids Res (2014) 0.85
Detection and diagnosis of rice-infecting viruses. Front Microbiol (2013) 0.84
Genetic Diversity Underlying the Envelope Glycoproteins of Hepatitis C Virus: Structural and Functional Consequences and the Implications for Vaccine Design. Viruses (2015) 0.84
Recent advances in molecular diagnostics of hepatitis B virus. World J Gastroenterol (2014) 0.83
Next-generation sequencing in clinical virology: Discovery of new viruses. World J Virol (2015) 0.82
Characterization of Five Novel Mitoviruses in the White Pine Blister Rust Fungus Cronartium ribicola. PLoS One (2016) 0.82
Revolutionising bacteriology to improve treatment outcomes and antibiotic stewardship. Infect Chemother (2013) 0.82
Identification of RNA partners of viral proteins in infected cells. RNA Biol (2013) 0.81
The genome sequence of ectromelia virus Naval and Cornell isolates from outbreaks in North America. Virology (2014) 0.81
Viral diversity and clonal evolution from unphased genomic data. BMC Genomics (2014) 0.80
Characterization of a proposed dichorhavirus associated with the citrus leprosis disease and analysis of the host response. Viruses (2014) 0.80
Isolation and molecular characterization of newly emerging avian reovirus variants and novel strains in Pennsylvania, USA, 2011-2014. Sci Rep (2015) 0.79
Reconstructing the origin and transmission dynamics of the 1967-68 foot-and-mouth disease epidemic in the United Kingdom. Infect Genet Evol (2013) 0.78
Preferential Amplification of Pathogenic Sequences. Sci Rep (2015) 0.78
Phylogeographic analysis of hemorrhagic fever with renal syndrome patients using multiplex PCR-based next generation sequencing. Sci Rep (2016) 0.78
A Universal Next-Generation Sequencing Protocol To Generate Noninfectious Barcoded cDNA Libraries from High-Containment RNA Viruses. mSystems (2016) 0.78
Tunable and label-free virus enrichment for ultrasensitive virus detection using carbon nanotube arrays. Sci Adv (2016) 0.77
Isolation and Characterization of a Novel Gammaherpesvirus from a Microbat Cell Line. mSphere (2016) 0.77
Direct next-generation sequencing of virus-human mixed samples without pretreatment is favorable to recover virus genome. Biol Direct (2016) 0.77
Analysis of intra-host genetic diversity of Prunus necrotic ringspot virus (PNRSV) using amplicon next generation sequencing. PLoS One (2017) 0.76
HIV-1 Tropism Determines Different Mutation Profiles in Proviral DNA. PLoS One (2015) 0.76
Complete genome sequence of a rabies virus isolated from a human in central african republic. Genome Announc (2014) 0.76
Sequence-Independent, Single-Primer Amplification Next-Generation Sequencing of Hantaan Virus Cell Culture-Based Isolates. Am J Trop Med Hyg (2016) 0.75
Error correction and diversity analysis of population mixtures determined by NGS. PeerJ (2014) 0.75
Metagenomics Study of Viral Pathogens in Undiagnosed Respiratory Specimens and Identification of Human Enteroviruses at a Thailand Hospital. Am J Trop Med Hyg (2016) 0.75
Metagenomics: A new horizon in cancer research. Meta Gene (2015) 0.75
Blood transcriptomes reveal novel parasitic zoonoses circulating in Madagascar's lemurs. Biol Lett (2016) 0.75
Application of high-throughput sequencing to whole rabies viral genome characterisation and its use for phylogenetic re-evaluation of a raccoon strain incursion into the province of Ontario. Virus Res (2017) 0.75
Beyond the whole genome consensus: unravelling of PRRSV phylogenomics using next generation sequencing technologies. Virus Res (2014) 0.75
Genome Sequence of Dengue virus 3 from the Pythium insidiosum Transcriptomes. Front Microbiol (2016) 0.75
Use of S1 nuclease in deep sequencing for detection of double-stranded RNA viruses. J Vet Med Sci (2015) 0.75
Application of next generation sequencing for the detection of human viral pathogens in clinical specimens. J Clin Virol (2016) 0.75
Error correction and statistical analyses for intra-host comparisons of feline immunodeficiency virus diversity from high-throughput sequencing data. BMC Bioinformatics (2015) 0.75
Characterisation of complete high- and low-risk human papillomavirus genomes isolated from cervical specimens in southern Brazil. Mem Inst Oswaldo Cruz (2017) 0.75
Comparison of error correction algorithms for Ion Torrent PGM data: application to hepatitis B virus. Sci Rep (2017) 0.75
Generic Amplicon Deep Sequencing to Determine Ilarvirus Species Diversity in Australian Prunus. Front Microbiol (2017) 0.75
DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci U S A (1977) 790.54
Initial sequencing and analysis of the human genome. Nature (2001) 212.86
Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics (2009) 190.94
Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res (2008) 151.16
TopHat: discovering splice junctions with RNA-Seq. Bioinformatics (2009) 81.13
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics (2009) 67.17
Differential expression analysis for sequence count data. Genome Biol (2010) 64.56
RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. Genome Res (2008) 62.07
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature (1998) 60.62
Genome sequence of the human malaria parasite Plasmodium falciparum. Nature (2002) 37.89
A novel coronavirus associated with severe acute respiratory syndrome. N Engl J Med (2003) 29.55
Identification of a novel coronavirus in patients with severe acute respiratory syndrome. N Engl J Med (2003) 27.97
Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic. Nature (2009) 17.96
Specific enzymatic amplification of DNA in vitro: the polymerase chain reaction. Cold Spring Harb Symp Quant Biol (1986) 11.66
Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products. Chem Biol (1998) 9.46
Comprehensive comparative analysis of strand-specific RNA sequencing methods. Nat Methods (2010) 9.09
Performance comparison of benchtop high-throughput sequencing platforms. Nat Biotechnol (2012) 8.99
Target-enrichment strategies for next-generation sequencing. Nat Methods (2010) 8.78
GenBank. Nucleic Acids Res (2010) 8.63
Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis. J Clin Microbiol (2005) 7.91
Novel orthobunyavirus in Cattle, Europe, 2011. Emerg Infect Dis (2012) 7.62
DNA bar coding and pyrosequencing to identify rare HIV drug resistance mutations. Nucleic Acids Res (2007) 6.89
Metagenomic analyses of an uncultured viral community from human feces. J Bacteriol (2003) 6.65
Newly discovered ebola virus associated with hemorrhagic fever outbreak in Uganda. PLoS Pathog (2008) 6.07
Characterization of mutation spectra with ultra-deep pyrosequencing: application to HIV-1 drug resistance. Genome Res (2007) 5.95
Viruses in the faecal microbiota of monozygotic twins and their mothers. Nature (2010) 5.92
Viral population estimation using pyrosequencing. PLoS Comput Biol (2008) 5.89
MicroRNAs expressed by herpes simplex virus 1 during latent infection regulate viral mRNAs. Nature (2008) 5.29
Genetic detection and characterization of Lujo virus, a new hemorrhagic fever-associated arenavirus from southern Africa. PLoS Pathog (2009) 4.88
Accuracy and quality assessment of 454 GS-FLX Titanium pyrosequencing. BMC Genomics (2011) 4.39
Direct RNA sequencing. Nature (2009) 4.37
Metagenomic analyses of viruses in stool samples from children with acute flaccid paralysis. J Virol (2009) 4.14
MicroRNAs in development and disease. Physiol Rev (2011) 4.13
RNA-Seq-quantitative measurement of expression through massively parallel RNA-sequencing. Methods (2009) 4.02
Fast identification and removal of sequence contamination from genomic and metagenomic datasets. PLoS One (2011) 3.74
Metagenomic analysis of respiratory tract DNA viral communities in cystic fibrosis and non-cystic fibrosis individuals. PLoS One (2009) 3.41
Quasispecies theory and the behavior of RNA viruses. PLoS Pathog (2010) 3.19
Ultra-deep pyrosequencing of hepatitis B virus quasispecies from nucleoside and nucleotide reverse-transcriptase inhibitor (NRTI)-treated patients and NRTI-naive patients. J Infect Dis (2009) 3.08
Antiviral drug-resistant HBV: standardization of nomenclature and assays and recommendations for management. Hepatology (2007) 3.08
Bat guano virome: predominance of dietary viruses from insects and plants plus novel mammalian viruses. J Virol (2010) 3.03
Viral and microbial community dynamics in four aquatic environments. ISME J (2010) 2.95
High diversity of the viral community from an Antarctic lake. Science (2009) 2.57
Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms. Proc Natl Acad Sci U S A (2009) 2.52
Viral metagenomics. Rev Med Virol (2007) 2.44
New dimensions of the virus world discovered through metagenomics. Trends Microbiol (2009) 2.41
Long-term evolution and transmission dynamics of swine influenza A virus. Nature (2011) 2.39
Viral nucleic acids in live-attenuated vaccines: detection of minority variants and an adventitious virus. J Virol (2010) 2.37
Ecological origins of novel human pathogens. Crit Rev Microbiol (2007) 2.24
Metagenomic analysis of the viromes of three North American bat species: viral diversity among different bat species that share a common habitat. J Virol (2010) 2.18
A metagenomic analysis of pandemic influenza A (2009 H1N1) infection in patients from North America. PLoS One (2010) 1.99
Minority human immunodeficiency virus type 1 variants in antiretroviral-naive persons with reverse transcriptase codon 215 revertant mutations. J Virol (2008) 1.96
EBV and human microRNAs co-target oncogenic and apoptotic viral and human genes during latency. EMBO J (2012) 1.91
Marek's disease virus encodes MicroRNAs that map to meq and the latency-associated transcript. J Virol (2006) 1.91
Specific capture and whole-genome sequencing of viruses from clinical samples. PLoS One (2011) 1.78
Ultradeep pyrosequencing detects complex patterns of CD8+ T-lymphocyte escape in simian immunodeficiency virus-infected macaques. J Virol (2009) 1.76
Metagenomics and the molecular identification of novel viruses. Vet J (2010) 1.75
Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes. PLoS One (2011) 1.75
Minority variants associated with transmitted and acquired HIV-1 nonnucleoside reverse transcriptase inhibitor resistance: implications for the use of second-generation nonnucleoside reverse transcriptase inhibitors. J Acquir Immune Defic Syndr (2009) 1.73
Simultaneous high-resolution analysis of vaccinia virus and host cell transcriptomes by deep RNA sequencing. Proc Natl Acad Sci U S A (2010) 1.72
Sequence variability in clinical and laboratory isolates of herpes simplex virus 1 reveals new mutations. J Virol (2010) 1.71
mRNA deep sequencing reveals 75 new genes and a complex transcriptional landscape in Mimivirus. Genome Res (2010) 1.67
High-resolution human cytomegalovirus transcriptome. Proc Natl Acad Sci U S A (2011) 1.67
Metagenomics for the discovery of novel human viruses. Future Microbiol (2010) 1.65
Deep sequencing analysis of viruses infecting grapevines: Virome of a vineyard. Virology (2010) 1.62
Evolutionary dynamics of local pandemic H1N1/2009 influenza virus lineages revealed by whole-genome analysis. J Virol (2011) 1.55
The sensitivity of massively parallel sequencing for detecting candidate infectious agents associated with human tissue. PLoS One (2011) 1.53
The polyadenylation site of Mimivirus transcripts obeys a stringent 'hairpin rule'. Genome Res (2009) 1.53
Whole-genome characterization of human and simian immunodeficiency virus intrahost diversity by ultradeep pyrosequencing. J Virol (2010) 1.50
Raw sewage harbors diverse viral populations. MBio (2011) 1.50
Genetic and antigenic characterization of H1 influenza viruses from United States swine from 2008. J Gen Virol (2010) 1.48
Oxford Nanopore announcement sets sequencing sector abuzz. Nat Biotechnol (2012) 1.38
A viral discovery methodology for clinical biopsy samples utilising massively parallel next generation sequencing. PLoS One (2011) 1.32
High-resolution profiling and analysis of viral and host small RNAs during human cytomegalovirus infection. J Virol (2011) 1.28
Development of a low bias method for characterizing viral populations using next generation sequencing technology. PLoS One (2010) 1.25
Deep sequencing reveals highly complex dynamics of human cytomegalovirus genotypes in transplant patients over time. J Virol (2010) 1.23
Rapid emergence of telaprevir resistant hepatitis C virus strain from wildtype clone in vivo. Hepatology (2011) 1.23
Genomic analysis of highly virulent Georgia 2007/1 isolate of African swine fever virus. Emerg Infect Dis (2011) 1.21
Breaking the 1000-gene barrier for Mimivirus using ultra-deep genome and transcriptome sequencing. Virol J (2011) 1.20
Virus discovery by sequence-independent genome amplification. Rev Med Virol (2006) 1.20
Expression profiling of the intermediate and late stages of poxvirus replication. J Virol (2011) 1.20
Genome-wide analysis of the 5' and 3' ends of vaccinia virus early mRNAs delineates regulatory sequences of annotated and anomalous transcripts. J Virol (2011) 1.19
Temporal trends in the discovery of human viruses. Proc Biol Sci (2008) 1.17
Tracking the evolution of multiple in vitro hepatitis C virus replicon variants under protease inhibitor selection pressure by 454 deep sequencing. J Virol (2010) 1.17
Transcriptome sequencing, microarray, and proteomic analyses reveal cellular and metabolic impact of hepatitis C virus infection in vitro. Hepatology (2010) 1.17
Simple, sensitive, and swift sequencing of complete H5N1 avian influenza virus genomes. J Clin Microbiol (2008) 1.15
Quantitative and qualitative RNA-Seq-based evaluation of Epstein-Barr virus transcription in type I latency Burkitt's lymphoma cells. J Virol (2010) 1.15
Microbe hunting in the 21st century. Proc Natl Acad Sci U S A (2008) 1.15
The manipulation of miRNA-gene regulatory networks by KSHV induces endothelial cell motility. Blood (2011) 1.13
Metagenomic analysis of the turkey gut RNA virus community. Virol J (2010) 1.12
Rhinovirus genome variation during chronic upper and lower respiratory tract infections. PLoS One (2011) 1.05
Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine. Virology (2010) 1.04
A comprehensive deep sequencing strategy for full-length genomes of influenza A. PLoS One (2011) 1.01
HIV drug resistance surveillance using pooled pyrosequencing. PLoS One (2010) 0.99
Ultra-deep pyrosequencing analysis of the hepatitis B virus preCore region and main catalytic motif of the viral polymerase in the same viral genome. Nucleic Acids Res (2011) 0.97
Acute respiratory syndrome. China, Hong Kong Special Administrative Region of China, and Viet Nam. Wkly Epidemiol Rec (2003) 0.96
Deep sequencing reveals direct targets of gammaherpesvirus-induced mRNA decay and suggests that multiple mechanisms govern cellular transcript escape. PLoS One (2011) 0.93
Frequency of CXCR4-using viruses in primary HIV-1 infections using ultra-deep pyrosequencing. AIDS (2011) 0.91
An unbiased metagenomic search for infectious agents using monozygotic twins discordant for chronic fatigue. BMC Microbiol (2011) 0.87
Dynamics of haplotype frequency change in a CD8+TL epitope of simian immunodeficiency virus. Infect Genet Evol (2010) 0.85
Genome sequence of the human malaria parasite Plasmodium falciparum. Nature (2002) 37.89
Accurate determination of microbial diversity from 454 pyrosequencing data. Nat Methods (2009) 15.25
The genome of the African trypanosome Trypanosoma brucei. Science (2005) 11.48
Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus. Nature (2005) 8.55
GeneDB: a resource for prokaryotic and eukaryotic organisms. Nucleic Acids Res (2004) 6.30
Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature (2012) 5.67
Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Science (2010) 5.56
Analysis of the Plasmodium falciparum proteome by high-accuracy mass spectrometry. Nature (2002) 5.48
Comparative genomics of trypanosomatid parasitic protozoa. Science (2005) 5.37
The genome of the protist parasite Entamoeba histolytica. Nature (2005) 5.33
Regulation of sexual development of Plasmodium by translational repression. Science (2006) 4.15
An ancestral oomycete locus contains late blight avirulence gene Avr3a, encoding a protein that is recognized in the host cytoplasm. Proc Natl Acad Sci U S A (2005) 3.06
Antagonistic coevolution accelerates molecular evolution. Nature (2010) 2.80
Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes. Science (2005) 2.71
A transcriptomic analysis of the phylum Nematoda. Nat Genet (2004) 2.68
Comparative genomics of transcriptional control in the human malaria parasite Plasmodium falciparum. Genome Res (2004) 2.66
Genome of the host-cell transforming parasite Theileria annulata compared with T. parva. Science (2005) 2.55
The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans. Proc Natl Acad Sci U S A (2009) 2.48
The Orientia tsutsugamushi genome reveals massive proliferation of conjugative type IV secretion system and host-cell interaction genes. Proc Natl Acad Sci U S A (2007) 2.35
Towards the human colorectal cancer microbiome. PLoS One (2011) 2.30
Necrotic ingluvitis in wild finches. Vet Rec (2005) 2.26
Transcript-specific, single-nucleotide polymorphism discovery and linkage analysis in hexaploid bread wheat (Triticum aestivum L.). Plant Biotechnol J (2011) 2.13
Plasmodium falciparum variant surface antigen expression patterns during malaria. PLoS Pathog (2005) 2.13
A Plasmodium whole-genome synteny map: indels and synteny breakpoints as foci for species-specific genes. PLoS Pathog (2005) 2.05
Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes. Proc Natl Acad Sci U S A (2011) 1.71
The intestinal protozoan parasite Entamoeba histolytica contains 20 cysteine protease genes, of which only a small subset is expressed during in vitro cultivation. Eukaryot Cell (2003) 1.51
The role of CA3 hippocampal NMDA receptors in paired associate learning. J Neurosci (2006) 1.44
Emerging infectious disease leads to rapid population declines of common British birds. PLoS One (2010) 1.41
Gene synteny and evolution of genome architecture in trypanosomatids. Mol Biochem Parasitol (2004) 1.36
Targeted re-sequencing of the allohexaploid wheat exome. Plant Biotechnol J (2012) 1.35
From ATP to AZD6140: the discovery of an orally active reversible P2Y12 receptor antagonist for the prevention of thrombosis. Bioorg Med Chem Lett (2007) 1.33
The genetic map and comparative analysis with the physical map of Trypanosoma brucei. Nucleic Acids Res (2005) 1.33
Insight into the genome of Aspergillus fumigatus: analysis of a 922 kb region encompassing the nitrate assimilation gene cluster. Fungal Genet Biol (2004) 1.33
The genome of model malaria parasites, and comparative genomics. Curr Issues Mol Biol (2005) 1.32
Common inheritance of chromosome Ia associated with clonal expansion of Toxoplasma gondii. Genome Res (2006) 1.28
GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database. Nucleic Acids Res (2009) 1.27
Endosymbiont gene functions impaired and rescued by polymerase infidelity at poly(A) tracts. Proc Natl Acad Sci U S A (2008) 1.26
The diversity of Rab GTPases in Entamoeba histolytica. Exp Parasitol (2005) 1.23
Unique organisation of tRNA genes in Entamoeba histolytica. Mol Biochem Parasitol (2005) 1.22
A case for a Glossina genome project. Trends Parasitol (2005) 1.22
Genomic analysis of highly virulent Georgia 2007/1 isolate of African swine fever virus. Emerg Infect Dis (2011) 1.21
Comparative genomics and transduction potential of Enterococcus faecalis temperate bacteriophages. J Bacteriol (2009) 1.21
The architecture of variant surface glycoprotein gene expression sites in Trypanosoma brucei. Mol Biochem Parasitol (2002) 1.20
A new, expressed multigene family containing a hot spot for insertion of retroelements is associated with polymorphic subtelomeric regions of Trypanosoma brucei. Eukaryot Cell (2002) 1.19
Arabidopsis thaliana leaf form evolved via loss of KNOX expression in leaves in association with a selective sweep. Curr Biol (2010) 1.19
New assembly, reannotation and analysis of the Entamoeba histolytica genome reveal new genomic features and protein content information. PLoS Negl Trop Dis (2010) 1.17
A de novo expression profiling of Anopheles funestus, malaria vector in Africa, using 454 pyrosequencing. PLoS One (2011) 1.16
The genome of the obligate intracellular parasite Trachipleistophora hominis: new insights into microsporidian genome dynamics and reductive evolution. PLoS Pathog (2012) 1.16
Adenosine mediation of presynaptic feedback inhibition of glutamate release. Neuron (2005) 1.16
Characterisation of Salmonella enterica serotype Typhimurium isolates from wild birds in northern England from 2005 - 2006. BMC Vet Res (2008) 1.12
Patterns of evolution in the unique tRNA gene arrays of the genus Entamoeba. Mol Biol Evol (2007) 1.09
Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis. Genome Biol (2011) 1.08
Complete genome sequence of Mycoplasma haemofelis, a hemotropic mycoplasma. J Bacteriol (2011) 1.08
Evolutionary pressures on apicoplast transit peptides. Mol Biol Evol (2004) 1.08
Comparative genomics of Shiga toxin encoding bacteriophages. BMC Genomics (2012) 1.07
Dynamics of African swine fever virus shedding and excretion in domestic pigs infected by intramuscular inoculation and contact transmission. Vet Res (2014) 1.06
Whole genome sequencing of a natural recombinant Toxoplasma gondii strain reveals chromosome sorting and local allelic variants. Genome Biol (2009) 1.05
Genomic variations define divergence of water/wildlife-associated Campylobacter jejuni niche specialists from common clonal complexes. Environ Microbiol (2011) 1.04
Gene discovery in the Entamoeba invadens genome. Mol Biochem Parasitol (2003) 1.04
The ingi and RIME non-LTR retrotransposons are not randomly distributed in the genome of Trypanosoma brucei. Mol Biol Evol (2003) 1.03
The emergence and spread of finch trichomonosis in the British Isles. Philos Trans R Soc Lond B Biol Sci (2012) 1.03
Genome wide survey, discovery and evolution of repetitive elements in three Entamoeba species. BMC Genomics (2008) 1.03
Gene arrays at Pneumocystis carinii telomeres. Genetics (2005) 1.02
Genetic characterization indicates that a specific subpopulation of Pseudomonas aeruginosa is associated with keratitis infections. J Clin Microbiol (2011) 1.02
Elucidating variations in the nucleotide sequence of Ebola virus associated with increasing pathogenicity. Genome Biol (2014) 1.01
The Kardashian index: a measure of discrepant social media profile for scientists. Genome Biol (2014) 1.00
Visualization of pseudogenes in intracellular bacteria reveals the different tracks to gene destruction. Genome Biol (2008) 0.99
Identification of three novel superantigen-encoding genes in Streptococcus equi subsp. zooepidemicus, szeF, szeN, and szeP. Infect Immun (2010) 0.98
The MyD116 African swine fever virus homologue interacts with the catalytic subunit of protein phosphatase 1 and activates its phosphatase activity. J Virol (2007) 0.98
400000 nematode ESTs on the Net. Trends Parasitol (2003) 0.97
Genome sequence for "Candidatus Mycoplasma haemominutum," a low-pathogenicity hemoplasma species. J Bacteriol (2012) 0.97
Molecular epidemiology and characterization of Campylobacter spp. isolated from wild bird populations in northern England. Appl Environ Microbiol (2009) 0.97
Investigation of the bacterial communities associated with females of Lutzomyia sand fly species from South America. PLoS One (2012) 0.95
From a single whole exome read to notions of clinical screening: primary ciliary dyskinesia and RSPH9 p.Lys268del in the Arabian Peninsula. Ann Hum Genet (2012) 0.94
Acute necrotising pneumonitis associated with Suttonella ornithocola infection in tits (Paridae). Vet J (2010) 0.93
Exploring the diversity of Arcobacter butzleri from cattle in the UK using MLST and whole genome sequencing. PLoS One (2013) 0.93
A clonal strain of Trichomonas gallinae is the aetiologic agent of an emerging avian epidemic disease. Infect Genet Evol (2011) 0.92
Abundant larval transcript-1 and -2 genes from Brugia malayi: diversity of genomic environments but conservation of 5' promoter sequences functional in Caenorhabditis elegans. Mol Biochem Parasitol (2002) 0.92
Comparative genomics of Brachyspira pilosicoli strains: genome rearrangements, reductions and correlation of genetic compliment with phenotypic diversity. BMC Genomics (2012) 0.91
Population genomics of the killer whale indicates ecotype evolution in sympatry involving both selection and drift. Mol Ecol (2014) 0.91
Whole-genome sequencing of Trypanosoma brucei reveals introgression between subspecies that is associated with virulence. MBio (2013) 0.90
The genome and transcriptome of the enteric parasite Entamoeba invadens, a model for encystation. Genome Biol (2013) 0.90
After the gold rush. Genome Biol (2013) 0.89
Cryptic diversity within the major trypanosomiasis vector Glossina fuscipes revealed by molecular markers. PLoS Negl Trop Dis (2011) 0.87
Using genic sequence capture in combination with a syntenic pseudo genome to map a deletion mutant in a wheat species. Plant J (2014) 0.86
Genetically diverse coronaviruses in wild bird populations of northern England. Emerg Infect Dis (2009) 0.86
Insights into the P. y. yoelii hepatic stage transcriptome reveal complex transcriptional patterns. Mol Biochem Parasitol (2005) 0.85
A comprehensive genetic analysis of candidate genes regulating response to Trypanosoma congolense infection in mice. PLoS Negl Trop Dis (2010) 0.85
Meeting report: the fourth Genomic Standards Consortium (GSC) workshop. OMICS (2008) 0.85
Characterisation of the genomes of four putative vesiculoviruses: tench rhabdovirus, grass carp rhabdovirus, perch rhabdovirus and eel rhabdovirus European X. Arch Virol (2013) 0.85
Evidence of spread of the emerging infectious disease, finch trichomonosis, by migrating birds. Ecohealth (2011) 0.85
Management of severe respiratory tract disease caused by human respiratory syncytial virus and Streptococcus pneumoniae in captive chimpanzees (Pan troglodytes). J Zoo Wildl Med (2013) 0.84
Deletion of virulence associated genes from attenuated African swine fever virus isolate OUR T88/3 decreases its ability to protect against challenge with virulent virus. Virology (2013) 0.84
African swine fever virus DNA in soft ticks, Senegal. Emerg Infect Dis (2007) 0.84
Epidemic finch mortality. Vet Rec (2006) 0.84
Identification of a mutation associated with fatal Foal Immunodeficiency Syndrome in the Fell and Dales pony. PLoS Genet (2011) 0.83
Molecular characterization of the uncultivatable hemotropic bacterium Mycoplasma haemofelis. Vet Res (2011) 0.83