Published in Nucleic Acids Res on January 25, 2013
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Inosine modifications in human tRNAs are incorporated at the precursor tRNA level. Nucleic Acids Res (2015) 0.91
Identification of enzymes for adenosine-to-inosine editing and discovery of cytidine-to-uridine editing in nucleus-encoded transfer RNAs of Arabidopsis. Plant Physiol (2014) 0.87
Multiple RNA processing defects and impaired chloroplast function in plants deficient in the organellar protein-only RNase P enzyme. PLoS One (2015) 0.82
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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res (1997) 175.36
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The many roles of an RNA editor. Nat Rev Genet (2001) 2.55
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An adenosine deaminase that generates inosine at the wobble position of tRNAs. Science (1999) 2.32
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Superwobbling facilitates translation with reduced tRNA sets. Nat Struct Mol Biol (2008) 1.26
Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems. Nucleic Acids Res (2011) 1.25
Identification and characterization of a human tRNA-specific adenosine deaminase related to the ADAR family of pre-mRNA editing enzymes. Proc Natl Acad Sci U S A (1999) 1.25
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Nucleotide sequence of a spinach chloroplast isoleucine tRNA. J Biol Chem (1982) 1.17
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Genome-wide analysis of plastid gene expression in potato leaf chloroplasts and tuber amyloplasts: transcriptional and posttranscriptional control. Plant Physiol (2009) 1.12
An adenosine-to-inosine tRNA-editing enzyme that can perform C-to-U deamination of DNA. Proc Natl Acad Sci U S A (2007) 1.10
Lack of pseudouridine 38/39 in the anticodon arm of yeast cytoplasmic tRNA decreases in vivo recoding efficiency. J Biol Chem (2002) 1.08
Nonorthologous replacement of lysyl-tRNA synthetase prevents addition of lysine analogues to the genetic code. Proc Natl Acad Sci U S A (2003) 1.07
Arabidopsis tRNA adenosine deaminase arginine edits the wobble nucleotide of chloroplast tRNAArg(ACG) and is essential for efficient chloroplast translation. Plant Cell (2009) 1.06
The RNA acetyltransferase driven by ATP hydrolysis synthesizes N4-acetylcytidine of tRNA anticodon. EMBO J (2008) 1.06
In vitro import of a nuclearly encoded tRNA into mitochondria of Solanum tuberosum. Mol Cell Biol (2003) 1.01
Identification of a mitochondrial external NADPH dehydrogenase by overexpression in transgenic Nicotiana sylvestris. Plant J (2004) 0.96
Identification of the chloroplast adenosine-to-inosine tRNA editing enzyme. RNA (2009) 0.96
Nucleotide modifications and tRNA anticodon-mRNA codon interactions on the ribosome. RNA (2011) 0.94
Transfer RNA modifications and genes for modifying enzymes in Arabidopsis thaliana. BMC Plant Biol (2010) 0.94
Genes, enzymes and coenzymes of queuosine biosynthesis in procaryotes. Biochimie (1994) 0.91
Reverse transcription of tRNA. Nucleic Acids Res (1978) 0.91
Role of editing in plant mitochondrial transfer RNAs. Gene (2002) 0.89
Evolutionary constraints on the plastid tRNA set decoding methionine and isoleucine. Nucleic Acids Res (2012) 0.89
Evolutionary and functional aspects of C-to-U editing at position 28 of tRNA(Cys)(GCA) in plant mitochondria. RNA (2000) 0.87
Identification of cis-elements conferring high levels of gene expression in non-green plastids. Plant J (2012) 0.87
The nucleotide sequence and characterization of four chloroplast tRNAs from the alga codium fragile. J Biol Chem (1989) 0.79
Accurate processing and pseudouridylation of chloroplast transfer RNA in a chloroplast transcription system. Plant Mol Biol (1984) 0.77
OrganellarGenomeDRAW (OGDRAW): a tool for the easy generation of high-quality custom graphical maps of plastid and mitochondrial genomes. Curr Genet (2007) 3.15
Multicolor bimolecular fluorescence complementation reveals simultaneous formation of alternative CBL/CIPK complexes in planta. Plant J (2008) 2.44
OrganellarGenomeDRAW--a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets. Nucleic Acids Res (2013) 2.13
Plastid transcriptomics and translatomics of tomato fruit development and chloroplast-to-chromoplast differentiation: chromoplast gene expression largely serves the production of a single protein. Plant Cell (2008) 2.09
Exchange of genetic material between cells in plant tissue grafts. Science (2009) 1.81
High-frequency gene transfer from the chloroplast genome to the nucleus. Proc Natl Acad Sci U S A (2003) 1.70
Identification of small non-coding RNAs from mitochondria and chloroplasts. Nucleic Acids Res (2006) 1.69
Elimination of deleterious mutations in plastid genomes by gene conversion. Plant J (2006) 1.57
Determining the transgene containment level provided by chloroplast transformation. Proc Natl Acad Sci U S A (2007) 1.52
Exhaustion of the chloroplast protein synthesis capacity by massive expression of a highly stable protein antibiotic. Plant J (2008) 1.50
The calcium sensor CBL1 integrates plant responses to abiotic stresses. Plant J (2003) 1.48
Experimental reconstruction of the functional transfer of intron-containing plastid genes to the nucleus. Curr Biol (2012) 1.46
Molecular farming for new drugs and vaccines. Current perspectives on the production of pharmaceuticals in transgenic plants. EMBO Rep (2005) 1.45
Unraveling the evolution of auxin signaling. Plant Physiol (2010) 1.41
Alternative complex formation of the Ca-regulated protein kinase CIPK1 controls abscisic acid-dependent and independent stress responses in Arabidopsis. Plant J (2006) 1.36
Sequence of the tomato chloroplast DNA and evolutionary comparison of solanaceous plastid genomes. J Mol Evol (2006) 1.32
Horizontal transfer of chloroplast genomes between plant species. Proc Natl Acad Sci U S A (2012) 1.27
High-level expression of human immunodeficiency virus antigens from the tobacco and tomato plastid genomes. Plant Biotechnol J (2008) 1.27
Plastid biotechnology: food, fuel, and medicine for the 21st century. Plant Physiol (2011) 1.27
Auxin signaling in algal lineages: fact or myth? Trends Plant Sci (2009) 1.26
Superwobbling facilitates translation with reduced tRNA sets. Nat Struct Mol Biol (2008) 1.26
Deficiency in phylloquinone (vitamin K1) methylation affects prenyl quinone distribution, photosystem I abundance, and anthocyanin accumulation in the Arabidopsis AtmenG mutant. J Biol Chem (2006) 1.23
Generation of Chlamydomonas strains that efficiently express nuclear transgenes. Plant J (2008) 1.21
Evidence that cytochrome b559 mediates the oxidation of reduced plastoquinone in the dark. J Biol Chem (2003) 1.21
Design of simple synthetic RNA thermometers for temperature-controlled gene expression in Escherichia coli. Nucleic Acids Res (2008) 1.20
Rpl33, a nonessential plastid-encoded ribosomal protein in tobacco, is required under cold stress conditions. Plant Cell (2008) 1.20
Contained metabolic engineering in tomatoes by expression of carotenoid biosynthesis genes from the plastid genome. Plant J (2007) 1.19
Nonessential plastid-encoded ribosomal proteins in tobacco: a developmental role for plastid translation and implications for reductive genome evolution. Plant Cell (2011) 1.16
Experimental reconstruction of functional gene transfer from the tobacco plastid genome to the nucleus. Plant Cell (2006) 1.14
Tobacco plastid ribosomal protein S18 is essential for cell survival. Nucleic Acids Res (2006) 1.14
Plastid production of protein antibiotics against pneumonia via a new strategy for high-level expression of antimicrobial proteins. Proc Natl Acad Sci U S A (2009) 1.12
Genome-wide analysis of plastid gene expression in potato leaf chloroplasts and tuber amyloplasts: transcriptional and posttranscriptional control. Plant Physiol (2009) 1.12
Knockout of the plastid RNase E leads to defective RNA processing and chloroplast ribosome deficiency. Plant J (2010) 1.10
ATP synthase repression in tobacco restricts photosynthetic electron transport, CO2 assimilation, and plant growth by overacidification of the thylakoid lumen. Plant Cell (2011) 1.08
Identification of a plastid intercistronic expression element (IEE) facilitating the expression of stable translatable monocistronic mRNAs from operons. Plant J (2007) 1.07
A codon-optimized luciferase from Gaussia princeps facilitates the in vivo monitoring of gene expression in the model alga Chlamydomonas reinhardtii. Curr Genet (2008) 1.07
Efficient metabolic pathway engineering in transgenic tobacco and tomato plastids with synthetic multigene operons. Proc Natl Acad Sci U S A (2013) 1.07
Photosystem I: its biogenesis and function in higher plants. J Plant Physiol (2011) 1.06
Plastid protein synthesis is required for plant development in tobacco. Proc Natl Acad Sci U S A (2003) 1.05
Inducible gene expression from the plastid genome by a synthetic riboswitch. Proc Natl Acad Sci U S A (2010) 1.04
Local absence of secondary structure permits translation of mRNAs that lack ribosome-binding sites. PLoS Genet (2011) 1.03
Identification of protein stability determinants in chloroplasts. Plant J (2010) 1.03
The plastid genome-encoded Ycf4 protein functions as a nonessential assembly factor for photosystem I in higher plants. Plant Physiol (2012) 1.03
Constancy of organellar genome copy numbers during leaf development and senescence in higher plants. Mol Genet Genomics (2005) 1.03
Selection of Shine-Dalgarno sequences in plastids. Nucleic Acids Res (2010) 1.03
Why are most organelle genomes transmitted maternally? Bioessays (2014) 1.02
The plastome-encoded PsaJ subunit is required for efficient Photosystem I excitation, but not for plastocyanin oxidation in tobacco. Biochem J (2007) 1.02
High-level expression of a suite of thermostable cell wall-degrading enzymes from the chloroplast genome. Plant Mol Biol (2011) 1.00
Y3IP1, a nucleus-encoded thylakoid protein, cooperates with the plastid-encoded Ycf3 protein in photosystem I assembly of tobacco and Arabidopsis. Plant Cell (2010) 0.99
Tuning a ménage à trois: co-evolution and co-adaptation of nuclear and organellar genomes in plants. Bioessays (2013) 0.97
The plastid-specific ribosomal proteins of Arabidopsis thaliana can be divided into non-essential proteins and genuine ribosomal proteins. Plant J (2011) 0.96
Identification of the chloroplast adenosine-to-inosine tRNA editing enzyme. RNA (2009) 0.96
The contributions of wobbling and superwobbling to the reading of the genetic code. PLoS Genet (2012) 0.95
Knock-out of the plastid-encoded PetL subunit results in reduced stability and accelerated leaf age-dependent loss of the cytochrome b6f complex. J Biol Chem (2006) 0.95
Surprising features of plastid ndhD transcripts: addition of non-encoded nucleotides and polysome association of mRNAs with an unedited start codon. Nucleic Acids Res (2004) 0.95
Enhancement of carotenoid biosynthesis in transplastomic tomatoes by induced lycopene-to-provitamin A conversion. Plant Physiol (2009) 0.93
Plastid transformation of high-biomass tobacco variety Maryland Mammoth for production of human immunodeficiency virus type 1 (HIV-1) p24 antigen. Plant Biotechnol J (2008) 0.93
Tomato fruit photosynthesis is seemingly unimportant in primary metabolism and ripening but plays a considerable role in seed development. Plant Physiol (2011) 0.93
A leaf-based regeneration and transformation system for maize (Zea mays L.). Transgenic Res (2006) 0.93
Temperature sensitivity of RNA editing and intron splicing reactions in the plastid ndhB transcript. Curr Genet (2002) 0.92
Synthetic biology in plastids. Plant J (2013) 0.92
Chloramphenicol acetyltransferase as selectable marker for plastid transformation. Plant Mol Biol (2010) 0.91
Lack of the small plastid-encoded PsbJ polypeptide results in a defective water-splitting apparatus of photosystem II, reduced photosystem I levels, and hypersensitivity to light. J Biol Chem (2002) 0.91
RBF1, a plant homolog of the bacterial ribosome-binding factor RbfA, acts in processing of the chloroplast 16S ribosomal RNA. Plant Physiol (2013) 0.91
LCAA, a novel factor required for magnesium protoporphyrin monomethylester cyclase accumulation and feedback control of aminolevulinic acid biosynthesis in tobacco. Plant Physiol (2012) 0.90
The Chlamydomonas chloroplast HLP protein is required for nucleoid organization and genome maintenance. Mol Plant (2009) 0.90
A mediator of singlet oxygen responses in Chlamydomonas reinhardtii and Arabidopsis identified by a luciferase-based genetic screen in algal cells. Plant Cell (2013) 0.89
Isolation of highly active photosystem II core complexes with a His-tagged Cyt b559 subunit from transplastomic tobacco plants. Biochim Biophys Acta (2008) 0.89
Rapid evolution of RNA editing sites in a small non-essential plastid gene. Nucleic Acids Res (2004) 0.89
Evolutionary constraints on the plastid tRNA set decoding methionine and isoleucine. Nucleic Acids Res (2012) 0.89
Elimination of a group II intron from a plastid gene causes a mutant phenotype. Nucleic Acids Res (2011) 0.89
Alteration of mitochondrial protein complexes in relation to metabolic regulation under short-term oxidative stress in Arabidopsis seedlings. Phytochemistry (2010) 0.88
The vacuolar calcium sensors CBL2 and CBL3 affect seed size and embryonic development in Arabidopsis thaliana. Plant J (2014) 0.87
Optimization of the expression of the HIV fusion inhibitor cyanovirin-N from the tobacco plastid genome. Plant Biotechnol J (2011) 0.87
Identification of cis-elements conferring high levels of gene expression in non-green plastids. Plant J (2012) 0.87
Biolistic co-transformation of the nuclear and plastid genomes. Plant J (2011) 0.86
Insensitivity of chloroplast gene expression to DNA methylation. Mol Genet Genomics (2009) 0.86
The amino acid sequence of a plastid protein is developmentally regulated by RNA editing. J Biol Chem (2001) 0.86
Viral and murine interleukin-10 are correctly processed and retain their biological activity when produced in tobacco. BMC Biotechnol (2009) 0.86
Transposition of a bacterial insertion sequence in chloroplasts. Plant J (2009) 0.86
Plant-based strategies aimed at expressing HIV antigens and neutralizing antibodies at high levels. Nef as a case study. Transgenic Res (2009) 0.85
Design of chimeric expression elements that confer high-level gene activity in chromoplasts. Plant J (2012) 0.85
Immunogenicity of chloroplast-derived HIV-1 p24 and a p24-Nef fusion protein following subcutaneous and oral administration in mice. Plant Biotechnol J (2011) 0.85
Chloroplast DNA in mature and senescing leaves: a reappraisal. Plant Cell (2014) 0.83
Reverse genetics in complex multigene operons by co-transformation of the plastid genome and its application to the open reading frame previously designated psbN. Plant J (2013) 0.83
Designing and using synthetic RNA thermometers for temperature-controlled gene expression in bacteria. Nat Protoc (2009) 0.81
Genetic transformation of the model green alga Chlamydomonas reinhardtii. Methods Mol Biol (2012) 0.81
Cytoplasm and chloroplasts are not suitable subcellular locations for beta-zein accumulation in transgenic plants. J Exp Bot (2005) 0.80