Published in J Am Med Inform Assoc on May 05, 2013
The transition to ICD-10-CM: challenges for pediatric practice. Pediatrics (2014) 1.19
Challenges and remediation for Patient Safety Indicators in the transition to ICD-10-CM. J Am Med Inform Assoc (2014) 0.94
Clinical research informatics and electronic health record data. Yearb Med Inform (2014) 0.93
The complexity and challenges of the International Classification of Diseases, Ninth Revision, Clinical Modification to International Classification of Diseases, 10th Revision, Clinical Modification transition in EDs. Am J Emerg Med (2015) 0.89
The electronic health record for translational research. J Cardiovasc Transl Res (2014) 0.86
Conducting Retrospective Ontological Clinical Trials in ICD-9-CM in the Age of ICD-10-CM. Cancer Inform (2014) 0.77
Metrics and tools for consistent cohort discovery and financial analyses post-transition to ICD-10-CM. J Am Med Inform Assoc (2015) 0.77
Physicians' Outlook on ICD-10-CM/PCS and Its Effect on Their Practice. Perspect Health Inf Manag (2015) 0.75
Preparing for the ICD-10-CM Transition: Automated Methods for Translating ICD Codes in Clinical Phenotype Definitions. EGEMS (Wash DC) (2016) 0.75
Adapting a Clinical Data Repository to ICD-10-CM through the use of a Terminology Repository. AMIA Annu Symp Proc (2014) 0.75
Comparing chronic condition rates using ICD-9 and ICD-10 in VA patients FY2014-2016. BMC Health Serv Res (2017) 0.75
Knowledge-based approaches to the maintenance of a large controlled medical terminology. J Am Med Inform Assoc (1995) 26.04
Desiderata for controlled medical vocabularies in the twenty-first century. Methods Inf Med (1998) 15.00
Comparability of cause of death between ICD-9 and ICD-10: preliminary estimates. Natl Vital Stat Rep (2001) 8.06
The importance of bottlenecks in protein networks: correlation with gene essentiality and expression dynamics. PLoS Comput Biol (2007) 5.63
Human disease classification in the postgenomic era: a complex systems approach to human pathobiology. Mol Syst Biol (2007) 5.02
Assessing validity of ICD-9-CM and ICD-10 administrative data in recording clinical conditions in a unique dually coded database. Health Serv Res (2008) 4.25
A dynamic network approach for the study of human phenotypes. PLoS Comput Biol (2009) 3.62
Unified Medical Language System term occurrences in clinical notes: a large-scale corpus analysis. J Am Med Inform Assoc (2012) 1.73
In defense of the Desiderata. J Biomed Inform (2005) 1.70
Survey of modular ontology techniques and their applications in the biomedical domain. Integr Comput Aided Eng (2009) 1.42
Improved accuracy of co-morbidity coding over time after the introduction of ICD-10 administrative data. BMC Health Serv Res (2011) 1.35
Migrating existing clinical content from ICD-9 to SNOMED. J Am Med Inform Assoc (2010) 1.30
Representation of change in controlled medical terminologies. Artif Intell Med (1999) 1.27
Complex-disease networks of trait-associated single-nucleotide polymorphisms (SNPs) unveiled by information theory. J Am Med Inform Assoc (2012) 1.17
Topological analysis of large-scale biomedical terminology structures. J Am Med Inform Assoc (2007) 1.06
The impact on relative risk estimates of inconsistencies between ICD-9 and ICD-10. Occup Environ Med (2006) 0.99
Usability-driven pruning of large ontologies: the case of SNOMED CT. J Am Med Inform Assoc (2012) 0.97
Auditing hierarchical cycles to locate other inconsistencies in the UMLS. AMIA Annu Symp Proc (2011) 0.91
ICD -10: A master data challenge. Health Manag Technol (2011) 0.82
Crosswalk options for legacy systems. Implementing near-term tactical solutions for ICD-10. J AHIMA (2011) 0.81
Assessing the process of designing and implementing electronic health records in a statewide public health system: the case of Colima, Mexico. J Am Med Inform Assoc (2012) 0.80
Changing diagnosis codes. N Engl J Med (1978) 0.79
Translational bioinformatics: linking knowledge across biological and clinical realms. J Am Med Inform Assoc (2011) 2.36
Information theory applied to the sparse gene ontology annotation network to predict novel gene function. Bioinformatics (2007) 2.15
Network modeling identifies molecular functions targeted by miR-204 to suppress head and neck tumor metastasis. PLoS Comput Biol (2010) 1.92
Use of consomic rats for genomic insights into ventilator-associated lung injury. Am J Physiol Lung Cell Mol Physiol (2007) 1.86
Information Visualization Techniques in Bioinformatics during the Postgenomic Era. Drug Discov Today Biosilico (2004) 1.85
Oxidant injury occurs rapidly after cardiac arrest, cardiopulmonary resuscitation, and reperfusion. Crit Care Med (2005) 1.76
Clinical and hemodynamic comparison of 15:2 and 30:2 compression-to-ventilation ratios for cardiopulmonary resuscitation. Crit Care Med (2006) 1.64
Essential role of pre-B-cell colony enhancing factor in ventilator-induced lung injury. Am J Respir Crit Care Med (2008) 1.38
Mining OMIM for insight into complex diseases. Stud Health Technol Inform (2004) 1.37
Exprtarget: an integrative approach to predicting human microRNA targets. PLoS One (2010) 1.31
Discovery of protein interaction networks shared by diseases. Pac Symp Biocomput (2007) 1.30
Protein interaction network underpins concordant prognosis among heterogeneous breast cancer signatures. J Biomed Inform (2010) 1.28
Variants affecting exon skipping contribute to complex traits. PLoS Genet (2012) 1.24
Kinase inhibition-related adverse events predicted from in vitro kinome and clinical trial data. J Biomed Inform (2010) 1.24
Generating executable knowledge for evidence-based medicine using natural language and semantic processing. AMIA Annu Symp Proc (2006) 1.20
Non-muscle myosin light chain kinase isoform is a viable molecular target in acute inflammatory lung injury. Am J Respir Cell Mol Biol (2010) 1.19
Complex-disease networks of trait-associated single-nucleotide polymorphisms (SNPs) unveiled by information theory. J Am Med Inform Assoc (2012) 1.17
Single sample expression-anchored mechanisms predict survival in head and neck cancer. PLoS Comput Biol (2012) 1.16
Integration of curated databases to identify genotype-phenotype associations. BMC Genomics (2006) 1.15
Extended attributes of event monitor systems for criteria-based notification modalities. Proc AMIA Symp (2002) 1.14
Putting data integration into practice: using biomedical terminologies to add structure to existing data sources. AMIA Annu Symp Proc (2003) 1.14
Genomic assessment of a multikinase inhibitor, sorafenib, in a rodent model of pulmonary hypertension. Physiol Genomics (2008) 1.14
Protein-network modeling of prostate cancer gene signatures reveals essential pathways in disease recurrence. J Am Med Inform Assoc (2011) 1.12
An integrative genomic approach to uncover molecular mechanisms of prokaryotic traits. PLoS Comput Biol (2006) 1.12
Detection of practice pattern trends through Natural Language Processing of clinical narratives and biomedical literature. AMIA Annu Symp Proc (2007) 1.10
Murine lung responses to ambient particulate matter: genomic analysis and influence on airway hyperresponsiveness. Environ Health Perspect (2008) 1.09
Genestrace: phenomic knowledge discovery via structured terminology. Pac Symp Biocomput (2005) 1.09
GADD45a is a novel candidate gene in inflammatory lung injury via influences on Akt signaling. FASEB J (2009) 1.06
Topological analysis of large-scale biomedical terminology structures. J Am Med Inform Assoc (2007) 1.06
Identifying clinically disruptive International Classification of Diseases 10th Revision Clinical Modification conversions to mitigate financial costs using an online tool. J Oncol Pract (2014) 1.05
Single-domain antibodies recognize selectively small oligomeric forms of amyloid beta, prevent Abeta-induced neurotoxicity and inhibit fibril formation. Mol Immunol (2008) 1.03
GO-Module: functional synthesis and improved interpretation of Gene Ontology patterns. Bioinformatics (2011) 1.02
Chronic intestinal inflammation induces stress-response genes in commensal Escherichia coli. Gastroenterology (2011) 1.02
PhenoGO: an integrated resource for the multiscale mining of clinical and biological data. BMC Bioinformatics (2009) 1.01
Web-based tailoring and its effect on self-efficacy: results from the MI-HEART randomized controlled trial. Proc AMIA Symp (2002) 1.01
Role of sphingolipids in murine radiation-induced lung injury: protection by sphingosine 1-phosphate analogs. FASEB J (2011) 0.98
Deregulation of a Hox protein regulatory network spanning prostate cancer initiation and progression. Clin Cancer Res (2012) 0.98
Concordance of deregulated mechanisms unveiled in underpowered experiments: PTBP1 knockdown case study. BMC Med Genomics (2014) 0.98
Simvastatin attenuates radiation-induced murine lung injury and dysregulated lung gene expression. Am J Respir Cell Mol Biol (2010) 0.98
Visualizing information across multidimensional post-genomic structured and textual databases. Bioinformatics (2004) 0.96
APOE-modulated Aβ-induced neuroinflammation in Alzheimer's disease: current landscape, novel data, and future perspective. J Neurochem (2015) 0.96
Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases. J Am Med Inform Assoc (2013) 0.95
Three-dimensional architecture of the IgH locus facilitates class switch recombination. Ann N Y Acad Sci (2012) 0.94
A "systematics" tool for medical terminologies. AMIA Annu Symp Proc (2003) 0.94
Translating Mendelian and complex inheritance of Alzheimer's disease genes for predicting unique personal genome variants. J Am Med Inform Assoc (2012) 0.93
Flexible ordering of antibody class switch and V(D)J joining during B-cell ontogeny. Genes Dev (2013) 0.92
Particulate matter induces cardiac arrhythmias via dysregulation of carotid body sensitivity and cardiac sodium channels. Am J Respir Cell Mol Biol (2011) 0.91
Adapting current Arden Syntax knowledge for an object oriented event monitor. AMIA Annu Symp Proc (2003) 0.90
Partitioning knowledge bases between advanced notification and clinical decision support systems. AMIA Annu Symp Proc (2005) 0.89
Natural language processing and visualization in the molecular imaging domain. J Biomed Inform (2006) 0.89
Evaluation of high-throughput functional categorization of human disease genes. BMC Bioinformatics (2007) 0.89
Robust methods for accurate diagnosis using pan-microbiological oligonucleotide microarrays. BMC Bioinformatics (2009) 0.87
Curation-free biomodules mechanisms in prostate cancer predict recurrent disease. BMC Med Genomics (2013) 0.86
Bio-Ontology and text: bridging the modeling gap. Bioinformatics (2006) 0.86
Towards mechanism classifiers: expression-anchored Gene Ontology signature predicts clinical outcome in lung adenocarcinoma patients. AMIA Annu Symp Proc (2012) 0.84
hMSH2 expression is driven by AP1-dependent regulation through phorbol-ester exposure. Nucleic Acids Res (2003) 0.84
Replication analysis for severe diabetic retinopathy. Invest Ophthalmol Vis Sci (2012) 0.84
Mechanism-anchored profiling derived from epigenetic networks predicts outcome in acute lymphoblastic leukemia. BMC Bioinformatics (2009) 0.84
The effects of ginsenoside Rb1 on JNK in oxidative injury in cardiomyocytes. Arch Pharm Res (2012) 0.83
Leverage hadoop framework for large scale clinical informatics applications. AMIA Jt Summits Transl Sci Proc (2013) 0.83
Utilisation of a thoracic oncology database to capture radiological and pathological images for evaluation of response to chemotherapy in patients with malignant pleural mesothelioma. BMJ Open (2012) 0.83
Biomolecular Systems of Disease Buried Across Multiple GWAS Unveiled by Information Theory and Ontology. AMIA Jt Summits Transl Sci Proc (2010) 0.83
Identification of common microRNA-mRNA regulatory biomodules in human epithelial cancers. Chin Sci Bull (2010) 0.83
The mitochondrial cardiolipin remodeling enzyme lysocardiolipin acyltransferase is a novel target in pulmonary fibrosis. Am J Respir Crit Care Med (2014) 0.83
Semantic webs for life sciences. Pac Symp Biocomput (2006) 0.82
Breakthroughs in genomics data integration for predicting clinical outcome. J Biomed Inform (2012) 0.82
Stromal microenvironment processes unveiled by biological component analysis of gene expression in xenograft tumor models. BMC Bioinformatics (2010) 0.82
Monitoring the function and use of a clinical decision support system. AMIA Annu Symp Proc (2007) 0.82
Terminology model discovery using natural language processing and visualization techniques. J Biomed Inform (2006) 0.81
Interpreting personal transcriptomes: personalized mechanism-scale profiling of RNA-seq data. Pac Symp Biocomput (2013) 0.81
Camelid Ig V genes reveal significant human homology not seen in therapeutic target genes, providing for a powerful therapeutic antibody platform. MAbs (2015) 0.81
A tool for abstracting relevant classes of concepts: the Common Ancestry Summarizer. Stud Health Technol Inform (2004) 0.81
My Interventional Drug-Eluting Stent Educational App (MyIDEA): Patient-Centered Design Methodology. JMIR Mhealth Uhealth (2015) 0.80
In Silico cancer cell versus stroma cellularity index computed from species-specific human and mouse transcriptome of xenograft models: towards accurate stroma targeting therapy assessment. BMC Med Genomics (2014) 0.80
Automating terminological networks to link heterogeneous biomedical databases. Stud Health Technol Inform (2004) 0.80
Current methodologies for translational bioinformatics. J Biomed Inform (2010) 0.79
Genetic interactions between chromosomes 11 and 18 contribute to airway hyperresponsiveness in mice. PLoS One (2012) 0.78
Gata5 deficiency causes airway constrictor hyperresponsiveness in mice. Am J Respir Cell Mol Biol (2014) 0.77
Integration of Neuroimaging and Microarray Datasets through Mapping and Model-Theoretic Semantic Decomposition of Unstructured Phenotypes. Cancer Inform (2009) 0.77
The rise of translational bioinformatics. Genome Biol (2012) 0.76
A cloud-based approach to medical NLP. AMIA Annu Symp Proc (2011) 0.76
A sphingosine 1-phosphate 1 receptor agonist modulates brain death-induced neurogenic pulmonary injury. Am J Respir Cell Mol Biol (2011) 0.76
Guideline interaction: a study of interactions among drug-disease contraindication rules. AMIA Annu Symp Proc (2003) 0.75
Evaluation of an Ontology-anchored Natural Language-based Approach for Asserting Multi-scale Biomolecular Networks for Systems Medicine. AMIA Jt Summits Transl Sci Proc (2010) 0.75
Cascading Policies Provide Fault Tolerance for Pervasive Clinical Communications. Proc IEEE Int Conf Pervasive Comput Commun (2005) 0.75
Information-theoretic classification of SNOMED improves the organization of context-sensitive excerpts from Cochrane reviews. AMIA Annu Symp Proc (2007) 0.75
Integration of Neuroimaging and Microarray Datasets through Mapping and Model-Theoretic Semantic Decomposition of Unstructured Phenotypes. Summit on Translat Bioinforma (2009) 0.75
Improving the human readability of Arden Syntax medical logic modules using a concept-oriented terminology and object-oriented programming expressions. Comput Inform Nurs (2006) 0.75
A knowledge framework for computational molecular-disease relationships in cancer. Proc AMIA Symp (2002) 0.75
Convergent downstream candidate mechanisms of independent intergenic polymorphisms between co-classified diseases implicate epistasis among noncoding elements. Pac Symp Biocomput (2018) 0.75