Published in Front Plant Sci on January 29, 2016
PvTFDB: a Phaseolus vulgaris transcription factors database for expediting functional genomics in legumes. Database (Oxford) (2016) 0.75
Genome sequence of the palaeopolyploid soybean. Nature (2010) 17.82
Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases. Nature (2003) 5.48
The Medicago genome provides insight into the evolution of rhizobial symbioses. Nature (2011) 4.94
Genome structure of the legume, Lotus japonicus. DNA Res (2008) 4.93
LysM domain receptor kinases regulating rhizobial Nod factor-induced infection. Science (2003) 4.63
A plant regulator controlling development of symbiotic root nodules. Nature (1999) 4.51
A receptor kinase gene of the LysM type is involved in legume perception of rhizobial signals. Nature (2003) 4.47
A receptor kinase gene regulating symbiotic nodule development. Nature (2002) 4.44
A plant receptor-like kinase required for both bacterial and fungal symbiosis. Nature (2002) 4.29
Isolation and characterization of novel nodulin cDNAs representing genes expressed at early stages of soybean nodule development. Mol Gen Genet (1993) 4.04
A reference genome for common bean and genome-wide analysis of dual domestications. Nat Genet (2014) 3.88
A gene expression atlas of the model legume Medicago truncatula. Plant J (2008) 3.38
A putative Ca2+ and calmodulin-dependent protein kinase required for bacterial and fungal symbioses. Science (2004) 3.23
Nodulin-26, a peribacteroid membrane nodulin is expressed independently of the development of the peribacteroid compartment. Nucleic Acids Res (1987) 3.13
Shoot control of root development and nodulation is mediated by a receptor-like kinase. Nature (2002) 3.04
Long-distance signaling in nodulation directed by a CLAVATA1-like receptor kinase. Science (2002) 2.99
Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids. Plant Physiol (2008) 2.91
Medicago truncatula DMI1 required for bacterial and fungal symbioses in legumes. Science (2004) 2.88
How to usefully compare homologous plant genes and chromosomes as DNA sequences. Plant J (2008) 2.76
A Ca2+/calmodulin-dependent protein kinase required for symbiotic nodule development: Gene identification by transcript-based cloning. Proc Natl Acad Sci U S A (2004) 2.54
Coexpression of neighboring genes in the genome of Arabidopsis thaliana. Genome Res (2004) 2.52
An integrated transcriptome atlas of the crop model Glycine max, and its use in comparative analyses in plants. Plant J (2010) 2.41
The mitotic inhibitor ccs52 is required for endoreduplication and ploidy-dependent cell enlargement in plants. EMBO J (1999) 2.40
The Medicago truncatula lysin [corrected] motif-receptor-like kinase gene family includes NFP and new nodule-expressed genes. Plant Physiol (2006) 2.39
Large-scale insertional mutagenesis using the Tnt1 retrotransposon in the model legume Medicago truncatula. Plant J (2008) 2.37
Medicago truncatula ENOD11: a novel RPRP-encoding early nodulin gene expressed during mycorrhization in arbuscule-containing cells. Mol Plant Microbe Interact (2001) 2.36
Primary structure of the soybean nodulin-35 gene encoding uricase II localized in the peroxisomes of uninfected cells of nodules. Proc Natl Acad Sci U S A (1985) 2.26
Deregulation of a Ca2+/calmodulin-dependent kinase leads to spontaneous nodule development. Nature (2006) 2.24
The Medicago truncatula SUNN gene encodes a CLV1-like leucine-rich repeat receptor kinase that regulates nodule number and root length. Plant Mol Biol (2005) 2.12
The NFP locus of Medicago truncatula controls an early step of Nod factor signal transduction upstream of a rapid calcium flux and root hair deformation. Plant J (2003) 2.11
Complete transcriptome of the soybean root hair cell, a single-cell model, and its alteration in response to Bradyrhizobium japonicum infection. Plant Physiol (2009) 2.00
Nodulin-24 gene of soybean codes for a peptide of the peribacteroid membrane and was generated by tandem duplication of a sequence resembling an insertion element. Proc Natl Acad Sci U S A (1985) 1.99
Transient induction of a peroxidase gene in Medicago truncatula precedes infection by Rhizobium meliloti. Plant Cell (1995) 1.98
Medicago truncatula NIN is essential for rhizobial-independent nodule organogenesis induced by autoactive calcium/calmodulin-dependent protein kinase. Plant Physiol (2007) 1.96
Plastid proteins crucial for symbiotic fungal and bacterial entry into plant roots. Nature (2004) 1.94
CYCLOPS, a DNA-binding transcriptional activator, orchestrates symbiotic root nodule development. Cell Host Microbe (2014) 1.85
A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis. Proc Natl Acad Sci U S A (2006) 1.85
Lotus japonicus nodulation requires two GRAS domain regulators, one of which is functionally conserved in a non-legume. Plant Physiol (2006) 1.81
Seven Lotus japonicus genes required for transcriptional reprogramming of the root during fungal and bacterial symbiosis. Plant Cell (2005) 1.81
Characterization of GmENOD40, a gene showing novel patterns of cell-specific expression during soybean nodule development. Plant J (1993) 1.81
Common components of the infection thread matrix and the intercellular space identified by immunocytochemical analysis of pea nodules and uninfected roots. EMBO J (1989) 1.77
The root hair "infectome" of Medicago truncatula uncovers changes in cell cycle genes and reveals a requirement for Auxin signaling in rhizobial infection. Plant Cell (2014) 1.72
NUCLEOPORIN85 is required for calcium spiking, fungal and bacterial symbioses, and seed production in Lotus japonicus. Plant Cell (2007) 1.71
The Medicago truncatula ortholog of Arabidopsis EIN2, sickle, is a negative regulator of symbiotic and pathogenic microbial associations. Plant J (2008) 1.69
CYCLOPS, a mediator of symbiotic intracellular accommodation. Proc Natl Acad Sci U S A (2008) 1.58
Medicago LYK3, an entry receptor in rhizobial nodulation factor signaling. Plant Physiol (2007) 1.58
Rhizobium nod factors reactivate the cell cycle during infection and nodule primordium formation, but the cycle is only completed in primordium formation. Plant Cell (1994) 1.52
The fate of duplicated genes in a polyploid plant genome. Plant J (2012) 1.50
Inoculation- and nitrate-induced CLE peptides of soybean control NARK-dependent nodule formation. Mol Plant Microbe Interact (2011) 1.47
Tracing nonlegume orthologs of legume genes required for nodulation and arbuscular mycorrhizal symbioses. Genetics (2006) 1.45
AP2-ERF transcription factors mediate Nod factor dependent Mt ENOD11 activation in root hairs via a novel cis-regulatory motif. Plant Cell (2007) 1.43
An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser-capture microdissection coupled to RNA sequencing. Plant J (2014) 1.37
MtCRE1-dependent cytokinin signaling integrates bacterial and plant cues to coordinate symbiotic nodule organogenesis in Medicago truncatula. Plant J (2011) 1.35
Islands of co-expressed neighbouring genes in Arabidopsis thaliana suggest higher-order chromosome domains. Plant J (2006) 1.33
Positional cloning identifies Lotus japonicus NSP2, a putative transcription factor of the GRAS family, required for NIN and ENOD40 gene expression in nodule initiation. DNA Res (2007) 1.32
The Medicago truncatula E3 ubiquitin ligase PUB1 interacts with the LYK3 symbiotic receptor and negatively regulates infection and nodulation. Plant Cell (2010) 1.30
Expression studies on AUX1-like genes in Medicago truncatula suggest that auxin is required at two steps in early nodule development. Mol Plant Microbe Interact (2001) 1.28
Evolution of NIN-like proteins in Arabidopsis, rice, and Lotus japonicus. J Mol Evol (2005) 1.27
Symbiosis-specific expression of two Medicago truncatula nodulin genes, MtN1 and MtN13, encoding products homologous to plant defense proteins. Mol Plant Microbe Interact (1998) 1.26
The Sym35 gene required for root nodule development in pea is an ortholog of Nin from Lotus japonicus. Plant Physiol (2003) 1.26
Nodule inception directly targets NF-Y subunit genes to regulate essential processes of root nodule development in Lotus japonicus. PLoS Genet (2013) 1.24
A small family of nodule specific genes from soybean. Nucleic Acids Res (1987) 1.24
LIN, a Medicago truncatula gene required for nodule differentiation and persistence of rhizobial infections. Plant Physiol (2004) 1.24
A nuclear-targeted cameleon demonstrates intranuclear Ca2+ spiking in Medicago truncatula root hairs in response to rhizobial nodulation factors. Plant Physiol (2009) 1.24
Analysis of calcium spiking using a cameleon calcium sensor reveals that nodulation gene expression is regulated by calcium spike number and the developmental status of the cell. Plant J (2006) 1.23
Establishment of the Lotus japonicus Gene Expression Atlas (LjGEA) and its use to explore legume seed maturation. Plant J (2013) 1.23
Root hair systems biology. Trends Plant Sci (2010) 1.21
Plant flotillins are required for infection by nitrogen-fixing bacteria. Proc Natl Acad Sci U S A (2009) 1.19
NENA, a Lotus japonicus homolog of Sec13, is required for rhizodermal infection by arbuscular mycorrhiza fungi and rhizobia but dispensable for cortical endosymbiotic development. Plant Cell (2010) 1.19
Legume pectate lyase required for root infection by rhizobia. Proc Natl Acad Sci U S A (2011) 1.18
The PIN and LAX families of auxin transport genes in Medicago truncatula. Mol Genet Genomics (2004) 1.18
3-hydroxy-3-methylglutaryl coenzyme a reductase 1 interacts with NORK and is crucial for nodulation in Medicago truncatula. Plant Cell (2007) 1.14
Gene-based sequence diversity analysis of field pea (Pisum). Genetics (2007) 1.10
The novel symbiotic phenotype of enhanced-nodulating mutant of Lotus japonicus: astray mutant is an early nodulating mutant with wider nodulation zone. Plant Cell Physiol (2002) 1.09
Arbuscular mycorrhizal symbiosis and plant aquaporin expression. Phytochemistry (2006) 1.08
klavier (klv), a novel hypernodulation mutant of Lotus japonicus affected in vascular tissue organization and floral induction. Plant J (2005) 1.07
The receptor-like kinase KLAVIER mediates systemic regulation of nodulation and non-symbiotic shoot development in Lotus japonicus. Development (2010) 1.05
The ROOT DETERMINED NODULATION1 gene regulates nodule number in roots of Medicago truncatula and defines a highly conserved, uncharacterized plant gene family. Plant Physiol (2011) 1.04
Soybean nodule autoregulation receptor kinase phosphorylates two kinase-associated protein phosphatases in vitro. J Biol Chem (2008) 1.04
Medicago truncatula ERN transcription factors: regulatory interplay with NSP1/NSP2 GRAS factors and expression dynamics throughout rhizobial infection. Plant Physiol (2012) 1.04
Soybean metabolites regulated in root hairs in response to the symbiotic bacterium Bradyrhizobium japonicum. Plant Physiol (2010) 1.03
Calcium spiking patterns and the role of the calcium/calmodulin-dependent kinase CCaMK in lateral root base nodulation of Sesbania rostrata. Plant Cell (2009) 1.03
Inactivation of duplicated nod factor receptor 5 (NFR5) genes in recessive loss-of-function non-nodulation mutants of allotetraploid soybean (Glycine max L. Merr.). Plant Cell Physiol (2009) 1.03
Quantitative phosphoproteomic analysis of soybean root hairs inoculated with Bradyrhizobium japonicum. Mol Cell Proteomics (2012) 1.03
Nodulation factor receptor kinase 1α controls nodule organ number in soybean (Glycine max L. Merr). Plant J (2010) 1.02
A C subunit of the plant nuclear factor NF-Y required for rhizobial infection and nodule development affects partner selection in the common bean-Rhizobium etli symbiosis. Plant Cell (2010) 1.02
A member of the highly conserved FWL (tomato FW2.2-like) gene family is essential for soybean nodule organogenesis. Plant J (2010) 1.01
An RNA-Seq based gene expression atlas of the common bean. BMC Genomics (2014) 1.01
MtENOD16 and 20 are members of a family of phytocyanin-related early nodulins. Plant Mol Biol (1998) 1.00
The Medicago truncatula MtAnn1 gene encoding an annexin is induced by Nod factors and during the symbiotic interaction with Rhizobium meliloti. Mol Plant Microbe Interact (1998) 0.99
Soybean nodule sucrose synthase (nodulin-100): further analysis of its phosphorylation using recombinant and authentic root-nodule enzymes. Arch Biochem Biophys (1999) 0.98
The early nodulin gene MtN6 is a novel marker for events preceding infection of Medicago truncatula roots by Sinorhizobium meliloti. Mol Plant Microbe Interact (1999) 0.98
A Medicago truncatula tobacco retrotransposon insertion mutant collection with defects in nodule development and symbiotic nitrogen fixation. Plant Physiol (2012) 0.98
Deep transcriptome sequencing provides new insights into the structural and functional organization of the wheat genome. Genome Biol (2015) 0.97
Structural implications of mutations in the pea SYM8 symbiosis gene, the DMI1 ortholog, encoding a predicted ion channel. Mol Plant Microbe Interact (2007) 0.95
Tnt1 retrotransposon mutagenesis: a tool for soybean functional genomics. Plant Physiol (2012) 0.94
Two CCAAT-box-binding transcription factors redundantly regulate early steps of the legume-rhizobia endosymbiosis. Plant J (2014) 0.94
Deep Sequencing of the Medicago truncatula Root Transcriptome Reveals a Massive and Early Interaction between Nodulation Factor and Ethylene Signals. Plant Physiol (2015) 0.92
A nodule-specific sequence encoding a methionine-rich polypeptide, nodulin-21. Plant Mol Biol (1990) 0.92
Functional domain analysis of the Remorin protein LjSYMREM1 in Lotus japonicus. PLoS One (2012) 0.91
Unleashing the potential of the root hair cell as a single plant cell type model in root systems biology. Front Plant Sci (2013) 0.86
Editorial: Plant Single Cell Type Systems Biology. Front Plant Sci (2016) 0.78