Published in PLoS Genet on July 28, 2016
Model-based analysis of ChIP-Seq (MACS). Genome Biol (2008) 51.63
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol (2014) 27.48
A gene complex controlling segmentation in Drosophila. Nature (1978) 23.75
Unlocking the secrets of the genome. Nature (2009) 11.80
A complementary transposon tool kit for Drosophila melanogaster using P and piggyBac. Nat Genet (2004) 8.55
P[acman]: a BAC transgenic platform for targeted insertion of large DNA fragments in D. melanogaster. Science (2006) 7.03
Stabilization of chromatin structure by PRC1, a Polycomb complex. Cell (1999) 6.90
Genome-wide analysis of Polycomb targets in Drosophila melanogaster. Nat Genet (2006) 6.48
The Drosophila Polycomb group gene pleiohomeotic encodes a DNA binding protein with homology to the transcription factor YY1. Mol Cell (1998) 5.79
Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila. Cell (2011) 4.29
A Drosophila Polycomb group complex includes Zeste and dTAFII proteins. Nature (2001) 3.90
Hierarchical recruitment of polycomb group silencing complexes. Mol Cell (2004) 3.73
Occupying chromatin: Polycomb mechanisms for getting to genomic targets, stopping transcriptional traffic, and staying put. Mol Cell (2013) 3.50
Chromosomal distribution of PcG proteins during Drosophila development. PLoS Biol (2006) 3.41
A vertebrate Polycomb response element governs segmentation of the posterior hindbrain. Cell (2009) 3.36
A region of the human HOXD cluster that confers polycomb-group responsiveness. Cell (2010) 3.27
Elements of the Drosophila bithorax complex that mediate repression by Polycomb group products. Dev Biol (1993) 3.07
Transcriptional regulation by Polycomb group proteins. Nat Struct Mol Biol (2013) 2.96
Co-localization of Polycomb protein and GAGA factor on regulatory elements responsible for the maintenance of homeotic gene expression. EMBO J (1997) 2.94
A Polycomb response element in the Ubx gene that determines an epigenetically inherited state of repression. EMBO J (1994) 2.91
GC-rich sequence elements recruit PRC2 in mammalian ES cells. PLoS Genet (2010) 2.86
Flanking duplications and deletions associated with P-induced male recombination in Drosophila. Genetics (1996) 2.76
Polycomb response elements mediate the formation of chromosome higher-order structures in the bithorax complex. Nat Cell Biol (2007) 2.72
PeakAnalyzer: genome-wide annotation of chromatin binding and modification loci. BMC Bioinformatics (2010) 2.65
Dynamic regulation by polycomb group protein complexes controls pattern formation and the cell cycle in Drosophila. Dev Cell (2008) 2.41
Enhancer loops appear stable during development and are associated with paused polymerase. Nature (2014) 2.36
Inheritance of Polycomb-dependent chromosomal interactions in Drosophila. Genes Dev (2003) 2.07
In situ dissection of the Fab-7 region of the bithorax complex into a chromatin domain boundary and a Polycomb-response element. Development (1997) 2.07
Transcriptional silencing by the Polycomb protein in Drosophila embryos. EMBO J (1995) 2.06
A fragment of engrailed regulatory DNA can mediate transvection of the white gene in Drosophila. Genetics (1991) 2.02
Unusual properties of regulatory DNA from the Drosophila engrailed gene: three "pairing-sensitive" sites within a 1.6-kb region. Genetics (1994) 1.98
Long range repression conferring boundaries of Ultrabithorax expression in the Drosophila embryo. EMBO J (1991) 1.97
The Drosophila pho-like gene encodes a YY1-related DNA binding protein that is redundant with pleiohomeotic in homeotic gene silencing. Development (2003) 1.94
Interactions among Polycomb domains are guided by chromosome architecture. PLoS Genet (2011) 1.76
Direct interaction of the Polycomb protein with Antennapedia regulatory sequences in polytene chromosomes of Drosophila melanogaster. EMBO J (1991) 1.72
Histone H2A monoubiquitination promotes histone H3 methylation in Polycomb repression. Nat Struct Mol Biol (2014) 1.66
Polycomb preferentially targets stalled promoters of coding and noncoding transcripts. Genome Res (2010) 1.63
Discrete Polycomb-binding sites in each parasegmental domain of the bithorax complex. Development (1995) 1.57
An interspecies analysis reveals a key role for unmethylated CpG dinucleotides in vertebrate Polycomb complex recruitment. EMBO J (2011) 1.55
Insulators, not Polycomb response elements, are required for long-range interactions between Polycomb targets in Drosophila melanogaster. Mol Cell Biol (2010) 1.47
Polycomb group response elements in Drosophila and vertebrates. Adv Genet (2013) 1.43
REST-mediated recruitment of polycomb repressor complexes in mammalian cells. PLoS Genet (2012) 1.26
Anteroposterior patterning in adult abdominal segments of Drosophila. Dev Biol (2002) 1.26
Cohesin and polycomb proteins functionally interact to control transcription at silenced and active genes. PLoS Genet (2013) 1.25
Dissecting the regulatory landscape of the Abd-B gene of the bithorax complex. Development (2006) 1.22
The Mcp element mediates stable long-range chromosome-chromosome interactions in Drosophila. Mol Biol Cell (2006) 1.21
REST interacts with Cbx proteins and regulates polycomb repressive complex 1 occupancy at RE1 elements. Mol Cell Biol (2011) 1.21
The Drosophila engrailed and invected genes: partners in regulation, expression and function. Genetics (1996) 1.18
The role of Polycomb-group response elements in regulation of engrailed transcription in Drosophila. Development (2008) 1.17
A complex array of DNA-binding proteins required for pairing-sensitive silencing by a polycomb group response element from the Drosophila engrailed gene. Genetics (2002) 1.13
Enhancer-promoter communication at the Drosophila engrailed locus. Development (2009) 1.10
H3K27 modifications define segmental regulatory domains in the Drosophila bithorax complex. Elife (2014) 1.03
Replacement of a Drosophila Polycomb response element core, and in situ analysis of its DNA motifs. Mol Genet Genomics (2008) 0.93
Establishment of regions of genomic activity during the Drosophila maternal to zygotic transition. Elife (2014) 0.93
Architectural and functional diversity of polycomb group response elements in Drosophila. Genetics (2013) 0.91
Cooperativity, specificity, and evolutionary stability of Polycomb targeting in Drosophila. Cell Rep (2014) 0.91
High-resolution mapping defines the cooperative architecture of Polycomb response elements. Genome Res (2014) 0.90
In situ dissection of a Polycomb response element in Drosophila melanogaster. Proc Natl Acad Sci U S A (2007) 0.89
Characterization of the polycomb group response elements of the Drosophila melanogaster invected Locus. Mol Cell Biol (2009) 0.89
Interplay between Homeobox proteins and Polycomb repressive complexes in p16INK⁴a regulation. EMBO J (2013) 0.89
Polycomb domain formation depends on short and long distance regulatory cues. PLoS One (2013) 0.87
A genetic approach to the recruitment of PRC2 at the HoxD locus. PLoS Genet (2013) 0.85
Combinatorial interactions are required for the efficient recruitment of pho repressive complex (PhoRC) to polycomb response elements. PLoS Genet (2014) 0.83
Polycomb group proteins bind an engrailed PRE in both the "ON" and "OFF" transcriptional states of engrailed. PLoS One (2012) 0.82
Co-regulation of invected and engrailed by a complex array of regulatory sequences in Drosophila. Dev Biol (2014) 0.81
P-element homing is facilitated by engrailed polycomb-group response elements in Drosophila melanogaster. PLoS One (2012) 0.80
Combgap contributes to recruitment of Polycomb group proteins in Drosophila. Proc Natl Acad Sci U S A (2016) 0.79
The CpG island encompassing the promoter and first exon of human DNMT3L gene is a PcG/TrX response element (PRE). PLoS One (2014) 0.79
Chromosome conformation capture on chip in single Drosophila melanogaster tissues. Methods (2012) 0.76