Published in Plant Physiol on June 29, 2017
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol (2002) 82.19
GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J (1987) 57.37
GATEWAY vectors for Agrobacterium-mediated plant transformation. Trends Plant Sci (2002) 16.83
microRNA-directed phasing during trans-acting siRNA biogenesis in plants. Cell (2005) 14.81
miRBase: annotating high confidence microRNAs using deep sequencing data. Nucleic Acids Res (2013) 13.41
The infection of clover root hairs by nodule bacteria studied by a simple glass slide technique. J Gen Microbiol (1957) 11.37
Target mimicry provides a new mechanism for regulation of microRNA activity. Nat Genet (2007) 9.48
The Vienna RNA websuite. Nucleic Acids Res (2008) 9.02
Genetic mapping of Rhizobium meliloti. Proc Natl Acad Sci U S A (1977) 6.61
Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation. Cell (2008) 5.73
DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana. Proc Natl Acad Sci U S A (2005) 5.16
A plant regulator controlling development of symbiotic root nodules. Nature (1999) 4.51
The roles of auxin response factor domains in auxin-responsive transcription. Plant Cell (2003) 4.19
Calcium spiking in plant root hairs responding to Rhizobium nodulation signals. Cell (1996) 4.09
DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7. Curr Biol (2006) 3.90
Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Curr Biol (2006) 3.71
Four genes of Medicago truncatula controlling components of a nod factor transduction pathway. Plant Cell (2000) 3.58
NSP1 of the GRAS protein family is essential for rhizobial Nod factor-induced transcription. Science (2005) 3.40
A gene expression atlas of the model legume Medicago truncatula. Plant J (2008) 3.38
Agrobacterium rhizogenes-transformed roots of Medicago truncatula for the study of nitrogen-fixing and endomycorrhizal symbiotic associations. Mol Plant Microbe Interact (2001) 3.25
A putative Ca2+ and calmodulin-dependent protein kinase required for bacterial and fungal symbioses. Science (2004) 3.23
Nodulation signaling in legumes requires NSP2, a member of the GRAS family of transcriptional regulators. Science (2005) 3.19
Evolution and functional diversification of MIRNA genes. Plant Cell (2011) 3.07
Specification of leaf polarity in Arabidopsis via the trans-acting siRNA pathway. Curr Biol (2006) 3.04
Medicago truncatula DMI1 required for bacterial and fungal symbioses in legumes. Science (2004) 2.88
The rules of engagement in the legume-rhizobial symbiosis. Annu Rev Genet (2011) 2.72
MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs. Genes Dev (2011) 2.66
The Medicago truncatula CRE1 cytokinin receptor regulates lateral root development and early symbiotic interaction with Sinorhizobium meliloti. Plant Cell (2006) 2.62
A Ca2+/calmodulin-dependent protein kinase required for symbiotic nodule development: Gene identification by transcript-based cloning. Proc Natl Acad Sci U S A (2004) 2.54
Pattern formation via small RNA mobility. Genes Dev (2009) 2.50
MtHAP2-1 is a key transcriptional regulator of symbiotic nodule development regulated by microRNA169 in Medicago truncatula. Genes Dev (2006) 2.41
Large-scale insertional mutagenesis using the Tnt1 retrotransposon in the model legume Medicago truncatula. Plant J (2008) 2.37
Speak, friend, and enter: signalling systems that promote beneficial symbiotic associations in plants. Nat Rev Microbiol (2013) 2.36
Genetic analysis of calcium spiking responses in nodulation mutants of Medicago truncatula. Proc Natl Acad Sci U S A (2000) 2.29
An ERF transcription factor in Medicago truncatula that is essential for Nod factor signal transduction. Plant Cell (2007) 2.20
Auxin transport inhibition precedes root nodule formation in white clover roots and is regulated by flavonoids and derivatives of chitin oligosaccharides. Plant J (1998) 2.20
enod40, a gene expressed during nodule organogenesis, codes for a non-translatable RNA involved in plant growth. EMBO J (1994) 2.18
The NFP locus of Medicago truncatula controls an early step of Nod factor signal transduction upstream of a rapid calcium flux and root hair deformation. Plant J (2003) 2.11
GRAS proteins form a DNA binding complex to induce gene expression during nodulation signaling in Medicago truncatula. Plant Cell (2009) 2.00
miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth. Plant Cell (2010) 1.96
Medicago truncatula NIN is essential for rhizobial-independent nodule organogenesis induced by autoactive calcium/calmodulin-dependent protein kinase. Plant Physiol (2007) 1.96
Novel and nodulation-regulated microRNAs in soybean roots. BMC Genomics (2008) 1.92
CYCLOPS, a DNA-binding transcriptional activator, orchestrates symbiotic root nodule development. Cell Host Microbe (2014) 1.85
The root hair "infectome" of Medicago truncatula uncovers changes in cell cycle genes and reveals a requirement for Auxin signaling in rhizobial infection. Plant Cell (2014) 1.72
Genome-wide Medicago truncatula small RNA analysis revealed novel microRNAs and isoforms differentially regulated in roots and nodules. Plant Cell (2009) 1.66
MicroRNA166 controls root and nodule development in Medicago truncatula. Plant J (2008) 1.61
CYCLOPS, a mediator of symbiotic intracellular accommodation. Proc Natl Acad Sci U S A (2008) 1.58
Medicago LYK3, an entry receptor in rhizobial nodulation factor signaling. Plant Physiol (2007) 1.58
Identification and characterization of nodulation-signaling pathway 2, a gene of Medicago truncatula involved in Nod actor signaling. Plant Physiol (2003) 1.58
The small interfering RNA production pathway is required for shoot meristem initiation in rice. Proc Natl Acad Sci U S A (2007) 1.46
AP2-ERF transcription factors mediate Nod factor dependent Mt ENOD11 activation in root hairs via a novel cis-regulatory motif. Plant Cell (2007) 1.43
Defective long-distance auxin transport regulation in the Medicago truncatula super numeric nodules mutant. Plant Physiol (2006) 1.42
Long-distance signaling to control root nodule number. Curr Opin Plant Biol (2006) 1.39
An integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser-capture microdissection coupled to RNA sequencing. Plant J (2014) 1.37
Root nodulation: a paradigm for how plant-microbe symbiosis influences host developmental pathways. Cell Host Microbe (2011) 1.34
Analyzing lateral root development: how to move forward. Plant Cell (2012) 1.31
Lateral root initiation: one step at a time. New Phytol (2012) 1.31
Oryza sativa dicer-like4 reveals a key role for small interfering RNA silencing in plant development. Plant Cell (2007) 1.30
enod40 induces dedifferentiation and division of root cortical cells in legumes. Proc Natl Acad Sci U S A (1997) 1.27
A nuclear-targeted cameleon demonstrates intranuclear Ca2+ spiking in Medicago truncatula root hairs in response to rhizobial nodulation factors. Plant Physiol (2009) 1.24
Failure of the tomato trans-acting short interfering RNA program to regulate AUXIN RESPONSE FACTOR3 and ARF4 underlies the wiry leaf syndrome. Plant Cell (2012) 1.22
Invasion by invitation: rhizobial infection in legumes. Mol Plant Microbe Interact (2011) 1.21
Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families. New Phytol (2009) 1.21
Misexpression of miR482, miR1512, and miR1515 increases soybean nodulation. Plant Physiol (2010) 1.19
The microRNA miR171h modulates arbuscular mycorrhizal colonization of Medicago truncatula by targeting NSP2. Plant J (2012) 1.17
Environmental regulation of lateral root emergence in Medicago truncatula requires the HD-Zip I transcription factor HB1. Plant Cell (2010) 1.17
Quantitative stem-loop RT-PCR for detection of microRNAs. Methods Mol Biol (2011) 1.16
Endogenous TasiRNAs mediate non-cell autonomous effects on gene regulation in Arabidopsis thaliana. PLoS One (2009) 1.14
Ectopic expression of miR160 results in auxin hypersensitivity, cytokinin hyposensitivity, and inhibition of symbiotic nodule development in soybean. Plant Physiol (2013) 1.09
Positive and negative regulation of cortical cell division during root nodule development in Lotus japonicus is accompanied by auxin response. Development (2012) 1.07
Medicago truncatula ERN transcription factors: regulatory interplay with NSP1/NSP2 GRAS factors and expression dynamics throughout rhizobial infection. Plant Physiol (2012) 1.04
Evolution of the ARF gene family in land plants: old domains, new tricks. Mol Biol Evol (2012) 1.02
A C subunit of the plant nuclear factor NF-Y required for rhizobial infection and nodule development affects partner selection in the common bean-Rhizobium etli symbiosis. Plant Cell (2010) 1.02
Fate map of Medicago truncatula root nodules. Development (2014) 1.01
IPD3 controls the formation of nitrogen-fixing symbiosomes in pea and Medicago Spp. Mol Plant Microbe Interact (2011) 0.98
Selective recruitment of mRNAs and miRNAs to polyribosomes in response to rhizobia infection in Medicago truncatula. Plant J (2012) 0.97
The small RNA diversity from Medicago truncatula roots under biotic interactions evidences the environmental plasticity of the miRNAome. Genome Biol (2014) 0.96
The Medicago truncatula DMI1 protein modulates cytosolic calcium signaling. Plant Physiol (2007) 0.96
Two CCAAT-box-binding transcription factors redundantly regulate early steps of the legume-rhizobia endosymbiosis. Plant J (2014) 0.94
Two microRNAs linked to nodule infection and nitrogen-fixing ability in the legume Lotus japonicus. Plant Physiol (2012) 0.94
An efficient reverse genetics platform in the model legume Medicago truncatula. New Phytol (2013) 0.89
The autoregulation gene SUNN mediates changes in root organ formation in response to nitrogen through alteration of shoot-to-root auxin transport. Plant Physiol (2012) 0.88
A nuclear factor Y interacting protein of the GRAS family is required for nodule organogenesis, infection thread progression, and lateral root growth. Plant Physiol (2014) 0.87
Plant-activated bacterial receptor adenylate cyclases modulate epidermal infection in the Sinorhizobium meliloti-Medicago symbiosis. Proc Natl Acad Sci U S A (2012) 0.86
Genome-wide identification and expression analysis of auxin response factor gene family in Medicago truncatula. Front Plant Sci (2015) 0.84
Transcriptional and post-transcriptional regulation of a NAC1 transcription factor in Medicago truncatula roots. New Phytol (2011) 0.84
Differentially expressed small RNAs in Arabidopsis galls formed by Meloidogyne javanica: a functional role for miR390 and its TAS3-derived tasiRNAs. New Phytol (2015) 0.83
The REDUCED LEAFLET genes encode key components of the trans-acting small interfering RNA pathway and regulate compound leaf and flower development in Lotus japonicus. Plant Physiol (2009) 0.82
Nuclear-localized cyclic nucleotide-gated channels mediate symbiotic calcium oscillations. Science (2016) 0.81
Knockdown of CELL DIVISION CYCLE16 reveals an inverse relationship between lateral root and nodule numbers and a link to auxin in Medicago truncatula. Plant Physiol (2009) 0.81
The REL3-mediated TAS3 ta-siRNA pathway integrates auxin and ethylene signaling to regulate nodulation in Lotus japonicus. New Phytol (2013) 0.81
The NIN Transcription Factor Coordinates Diverse Nodulation Programs in Different Tissues of the Medicago truncatula Root. Plant Cell (2015) 0.81
A Phylogenetically Conserved Group of Nuclear Factor-Y Transcription Factors Interact to Control Nodulation in Legumes. Plant Physiol (2015) 0.80
MiR171h restricts root symbioses and shows like its target NSP2 a complex transcriptional regulation in Medicago truncatula. BMC Plant Biol (2014) 0.78
A Medicago truncatula rdr6 allele impairs transgene silencing and endogenous phased siRNA production but not development. Plant Biotechnol J (2014) 0.76
The legume NOOT-BOP-COCH-LIKE genes are conserved regulators of abscission, a major agronomical trait in cultivated crops. New Phytol (2015) 0.76
The ERN1 transcription factor gene is a target of the CCaMK/CYCLOPS complex and controls rhizobial infection in Lotus japonicus. New Phytol (2017) 0.76
microRNA160 dictates stage-specific auxin and cytokinin sensitivities and directs soybean nodule development. Plant J (2015) 0.75
Noncoding RNAs, Emerging Regulators in Root Endosymbioses. Mol Plant Microbe Interact (2016) 0.75
A Phylogenetically Conserved Group of Nuclear Factor-Y Transcription Factors Interact to Control Nodulation in Legumes. Plant Physiol (2015) 0.80
Changes in the Common Bean Transcriptome in Response to Secreted and Surface Signal Molecules of Rhizobium etli. Plant Physiol (2015) 0.78
The small GTPase ROP10 of Medicago truncatula is required for both tip growth of root hairs and nod factor-induced root hair deformation. Plant Cell (2015) 0.77
Analysis of Ribosome-Associated mRNAs in Rice Reveals the Importance of Transcript Size and GC Content in Translation. G3 (Bethesda) (2016) 0.75
Small GTPases in plant biotic interactions. Small GTPases (2017) 0.75
The monomeric GTPase RabA2 is required for progression and maintenance of membrane integrity of infection threads during root nodule symbiosis. Plant Mol Biol (2017) 0.75