A database for orphan genes in Poaceae.

PubWeight™: 0.75‹?›

🔗 View Article (PMID 28966675)

Published in Exp Ther Med on August 09, 2017

Authors

Chensong Yao1, Hanwei Yan2, Xiaodan Zhang3, Rongfu Wang4

Author Affiliations

1: Graduate School, Anhui Agricultural University, Hefei, Anhui 230036, P.R. China.
2: Laboratory of Modern Biotechnology, Anhui Agricultural University, Hefei, Anhui 230036, P.R. China.
3: School of Information and Computer Science, Anhui Agricultural University, Hefei, Anhui 230036, P.R. China.
4: Department of Life Sciences, Anhui Agricultural University, Hefei, Anhui 230036, P.R. China.

Articles cited by this

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res (1997) 665.31

Phytozome: a comparative platform for green plant genomics. Nucleic Acids Res (2011) 11.32

WoLF PSORT: protein localization predictor. Nucleic Acids Res (2007) 10.14

Ensembl 2015. Nucleic Acids Res (2014) 8.30

The ecoresponsive genome of Daphnia pulex. Science (2011) 6.55

ExPASy: SIB bioinformatics resource portal. Nucleic Acids Res (2012) 3.70

The yeast genome project: what did we learn? Trends Genet (1996) 3.53

Proto-genes and de novo gene birth. Nature (2012) 3.43

The evolutionary origin of orphan genes. Nat Rev Genet (2011) 2.98

Gene family evolution across 12 Drosophila genomes. PLoS Genet (2007) 2.94

Interfamily transfer of a plant pattern-recognition receptor confers broad-spectrum bacterial resistance. Nat Biotechnol (2010) 2.82

Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen Dothideomycetes fungi. PLoS Pathog (2012) 2.66

Prediction of human protein function according to Gene Ontology categories. Bioinformatics (2003) 2.54

An evolutionary analysis of orphan genes in Drosophila. Genome Res (2003) 2.52

More than just orphans: are taxonomically-restricted genes important in evolution? Trends Genet (2009) 2.46

Origin of primate orphan genes: a comparative genomics approach. Mol Biol Evol (2008) 1.95

Accelerated recruitment of new brain development genes into the human genome. PLoS Biol (2011) 1.39

Orphans as taxonomically restricted and ecologically important genes. Microbiology (2005) 1.33

Evolutionary origins of Brassicaceae specific genes in Arabidopsis thaliana. BMC Evol Biol (2011) 1.30

Comparative analyses reveal distinct sets of lineage-specific genes within Arabidopsis thaliana. BMC Evol Biol (2010) 1.28

Younger genes are less likely to be essential than older genes, and duplicates are less likely to be essential than singletons of the same age. Mol Biol Evol (2012) 1.19

Enhanced tolerance to oxidative stress in transgenic Arabidopsis plants expressing proteins of unknown function. Plant Physiol (2008) 1.19

Identification and characterization of lineage-specific genes within the Poaceae. Plant Physiol (2007) 1.19

Identification and investigation of ORFans in the viral world. BMC Genomics (2008) 1.19

A novel gene family controls species-specific morphological traits in Hydra. PLoS Biol (2008) 1.16

Mechanisms and dynamics of orphan gene emergence in insect genomes. Genome Biol Evol (2013) 1.13

Identifying and quantifying orphan protein sequences in fungi. J Mol Biol (2009) 1.11

Consistent and contrasting properties of lineage-specific genes in the apicomplexan parasites Plasmodium and Theileria. BMC Evol Biol (2008) 1.09

What makes species unique? The contribution of proteins with obscure features. Genome Biol (2006) 1.08

POFs: what we don't know can hurt us. Trends Plant Sci (2007) 1.04

Identification and characterization of insect-specific proteins by genome data analysis. BMC Genomics (2007) 1.02

Genome-wide identification of lineage-specific genes in Arabidopsis, Oryza and Populus. Genomics (2009) 1.00

Genome-wide identification, characterization, and expression analysis of lineage-specific genes within zebrafish. BMC Genomics (2013) 0.97

Why so many unknown genes? Partitioning orphans from a representative transcriptome of the lone star tick Amblyomma americanum. BMC Genomics (2013) 0.91

Coming of age: orphan genes in plants. Trends Plant Sci (2014) 0.90