Published in Biochemistry on July 15, 1986
Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes. Nucleic Acids Res (1988) 7.05
Calibration of DNA curvature and a unified description of sequence-directed bending. Proc Natl Acad Sci U S A (1988) 3.09
Temperature and salt dependence of the gel migration anomaly of curved DNA fragments. Nucleic Acids Res (1987) 2.23
The major adduct of the antitumor drug cis-diamminedichloroplatinum(II) with DNA bends the duplex by approximately equal to 40 degrees toward the major groove. Proc Natl Acad Sci U S A (1988) 1.61
Myc/Max and other helix-loop-helix/leucine zipper proteins bend DNA toward the minor groove. Proc Natl Acad Sci U S A (1992) 1.30
Analysis of local helix bending in crystal structures of DNA oligonucleotides and DNA-protein complexes. Biophys J (1995) 1.26
Electron microscopy mapping of pBR322 DNA curvature. Comparison with theoretical models. EMBO J (1990) 1.24
Global structure and mechanical properties of a 10-bp nucleosome positioning motif. Proc Natl Acad Sci U S A (2000) 1.10
Localization of the intrinsically bent DNA region upstream of the E.coli rrnB P1 promoter. Nucleic Acids Res (1994) 1.08
Analysis of birefringence decay profiles for nucleic acid helices possessing bends: the tau-ratio approach. Biophys J (1997) 1.05
The DNA sequence-dependence of nucleosome positioning in vivo and in vitro. J Biomol Struct Dyn (2010) 0.96
Probing the dynamics of the P1 helix within the Tetrahymena group I intron. J Am Chem Soc (2009) 0.94
Heterocyclic diamidine interactions at AT base pairs in the DNA minor groove: effects of heterocycle differences, DNA AT sequence and length. J Phys Chem B (2008) 0.91
The leucine zipper may induce electrophoretic mobility anomalies without DNA bending. Proc Natl Acad Sci U S A (1996) 0.91
Sequence dependent electrophoretic mobilities and melting temperatures for A-T containing oligodeoxyribonucleotides. Nucleic Acids Res (1987) 0.91
Supercoiling-dependent flexibility of adenosine-tract-containing DNA detected by a topological method. Proc Natl Acad Sci U S A (1997) 0.88
The SV40 termination region exhibits an altered helical DNA conformation. Nucleic Acids Res (1987) 0.87
Electrophoresis of DNA in agarose gels, polyacrylamide gels and in free solution. Electrophoresis (2009) 0.86
Analysis of the intrinsic bend in the M13 origin of replication by atomic force microscopy. Biophys J (2003) 0.86
Intrinsic curvature in the VP1 gene of SV40: comparison of solution and gel results. Biophys J (2004) 0.84
Polyamines preferentially interact with bent adenine tracts in double-stranded DNA. Nucleic Acids Res (2005) 0.83
Preparation, resonance assignment, and preliminary dynamics characterization of residue specific 13C/15N-labeled elongated DNA for the study of sequence-directed dynamics by NMR. J Biomol NMR (2009) 0.83
Homodimer of p50 (NF kappa B1) does not introduce a substantial directed bend into DNA according to three different experimental assays. Nucleic Acids Res (1995) 0.83
Effect of the matrix on DNA electrophoretic mobility. J Chromatogr A (2008) 0.82
Determination of the three-dimensional structure of the Mrf2-DNA complex using paramagnetic spin labeling. Biochemistry (2007) 0.81
Bacteriophage Nf DNA region controlling late transcription: structural and functional homology with bacteriophage phi 29. Nucleic Acids Res (1993) 0.80
Sequence periodicity in nucleosomal DNA and intrinsic curvature. BMC Struct Biol (2010) 0.79
Comparison of the Mitochondrial Genomes and Steady State Transcriptomes of Two Strains of the Trypanosomatid Parasite, Leishmania tarentolae. PLoS Negl Trop Dis (2015) 0.79
Modulation of cyclobutane thymine photodimer formation in T11-tracts in rotationally phased nucleosome core particles and DNA minicircles. Nucleic Acids Res (2017) 0.78
DNA A-tracts are not curved in solutions containing high concentrations of monovalent cations. Biochemistry (2013) 0.78
A novel initiator regulates expression of the nontissue-specific helix-loop-helix gene ME1. Nucleic Acids Res (1995) 0.76
Improved estimation of secondary structure in ribonucleic acids. Nat New Biol (1973) 46.33
Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis. Nucleic Acids Res (1981) 35.39
The locus of sequence-directed and protein-induced DNA bending. Nature (1984) 15.05
Free energy of imperfect nucleic acid helices. II. Small hairpin loops. J Mol Biol (1973) 10.07
DNA bending at adenine . thymine tracts. Nature (1986) 9.25
Free energy of imperfect nucleic acid helices. 3. Small internal loops resulting from mismatches. J Mol Biol (1973) 8.74
Bent helical structure in kinetoplast DNA. Proc Natl Acad Sci U S A (1982) 6.43
Prediction of RNA secondary structure. Proc Natl Acad Sci U S A (1971) 5.68
Cerebral metabolic and cognitive decline in persons at genetic risk for Alzheimer's disease. Proc Natl Acad Sci U S A (2000) 4.85
Relaxation kinetics of dimer formation by self complementary oligonucleotides. J Mol Biol (1971) 4.77
Metallo-beta-lactamases in clinical Pseudomonas isolates in Taiwan and identification of VIM-3, a novel variant of the VIM-2 enzyme. Antimicrob Agents Chemother (2001) 4.72
Fragments of the HIV-1 Tat protein specifically bind TAR RNA. Science (1990) 4.33
Calculation of binding isotherms for heterogenous polymers. Biopolymers (1968) 4.26
The DNA binding domain and bending angle of E. coli CAP protein. Cell (1986) 3.99
Intermediates in transcription initiation from the E. coli lac UV5 promoter. Cell (1985) 3.88
RNA recognition by Tat-derived peptides: interaction in the major groove? Cell (1991) 3.83
On the physical basis for ambiguity in genetic coding interactions. Proc Natl Acad Sci U S A (1978) 3.71
Stability and properties of double and triple helices: dramatic effects of RNA or DNA backbone composition. Science (1992) 3.53
Normal human chromosomes have long G-rich telomeric overhangs at one end. Genes Dev (1997) 3.42
Artificial nucleosome positioning sequences. Proc Natl Acad Sci U S A (1989) 3.38
DNA-ethidium reaction kinetics: demonstration of direct ligand transfer between DNA binding sites. J Mol Biol (1975) 3.35
Studies of the binding of actinomycin and related compounds to DNA. J Mol Biol (1968) 3.35
The molecular mechanism of thermal unfolding of Escherichia coli formylmethionine transfer RNA. J Mol Biol (1974) 3.25
DNA sequence determinants of CAP-induced bending and protein binding affinity. Nature (1988) 3.22
DNA bending, flexibility, and helical repeat by cyclization kinetics. Methods Enzymol (1992) 3.10
Calibration of DNA curvature and a unified description of sequence-directed bending. Proc Natl Acad Sci U S A (1988) 3.09
DNA bend direction by phase sensitive detection. Nature (1987) 3.01
Conformational and thermodynamic properties of supercoiled DNA. J Mol Biol (1992) 2.94
Viscosity and sedimentation of the DNA from bacteriophages T2 and T7 and the relation to molecular weight. J Mol Biol (1965) 2.90
A floral transmitting tissue-specific glycoprotein attracts pollen tubes and stimulates their growth. Cell (1995) 2.85
Determination of the extent of DNA bending by an adenine-thymine tract. Biochemistry (1990) 2.72
Regional brain metabolic changes in patients with major depression treated with either paroxetine or interpersonal therapy: preliminary findings. Arch Gen Psychiatry (2001) 2.67
The influence of polyvalency on the binding properties of antibodies. Immunochemistry (1972) 2.67
CAP and RNA polymerase interactions with the lac promoter: binding stoichiometry and long range effects. Nucleic Acids Res (1983) 2.60
The 3' terminus of 16S rRNA: secondary structure and interaction with ribosomal protein S1. Nucleic Acids Res (1979) 2.51
Equilibrium studies of the cyclic AMP receptor protein-DNA interaction. J Mol Biol (1984) 2.49
Separations of open-circular DNA using pulsed-field electrophoresis. Proc Natl Acad Sci U S A (1987) 2.48
Kinetics and mechanism in the reaction of gene regulatory proteins with DNA. J Mol Biol (1984) 2.43
Identification and characterization of genomic nucleosome-positioning sequences. J Mol Biol (1997) 2.41
Is there a discriminator site in transfer RNA? Proc Natl Acad Sci U S A (1972) 2.37
Direct physical evidence for secondary structure in an isolated fragment of R17 bacteriophage mRNA. Nature (1974) 2.28
Conformational changes of transfer ribonucleic acid. Equilibrium phase diagrams. Biochemistry (1972) 2.27
Major groove accessibility of RNA. Science (1993) 2.19
Detection of localized DNA flexibility. Nature (1994) 2.18
Protein-induced bending and DNA cyclization. Proc Natl Acad Sci U S A (1992) 2.12
Synergy between Escherichia coli CAP protein and RNA polymerase in the lac promoter open complex. J Mol Biol (1989) 2.11
Dissemination of CTX-M-3 and CMY-2 beta-lactamases among clinical isolates of Escherichia coli in southern Taiwan. J Clin Microbiol (2000) 2.11
Studies of the complex between transfer RNAs with complementary anticodons. I. Origins of enhanced affinity between complementary triplets. J Mol Biol (1976) 2.05
Transient electric dichroism of rod-like DNA molecules. Proc Natl Acad Sci U S A (1978) 2.05
Lac repressor is a transient gene-activating protein. Cell (1987) 2.04
SIMPLIFIED ROTATING CYLINDER VISCOMETER FOR DNA. Proc Natl Acad Sci U S A (1962) 2.04
Synthetic DNA bending sequences increase the rate of in vitro transcription initiation at the Escherichia coli lac promoter. J Mol Biol (1991) 2.01
The Leptomonas collosoma spliced leader RNA can switch between two alternate structural forms. Biochemistry (1993) 2.00
A stressed intermediate in the formation of stably initiated RNA chains at the Escherichia coli lac UV5 promoter. J Mol Biol (1987) 2.00
31P NMR studies of the solution structure and dynamics of nucleosomes and DNA. Nucleic Acids Res (1979) 1.98
Specificity and stringency in DNA triplex formation. Proc Natl Acad Sci U S A (1991) 1.96
Relaxation studies of the proflavine-DNA complex: the kinetics of an intercalation reaction. J Mol Biol (1969) 1.95
Conformational changes of transfer RNA. The role of magnesium(II). Biochemistry (1976) 1.95
A computer graphics study of sequence-directed bending in DNA. J Biomol Struct Dyn (1983) 1.94
Effects of DNA sequence and histone-histone interactions on nucleosome placement. J Mol Biol (1990) 1.91
Outbreak of infection with multidrug-resistant Klebsiella pneumoniae carrying bla(IMP-8) in a university medical center in Taiwan. J Clin Microbiol (2001) 1.88
Problems and prospects in the theory of gel electrophoresis of DNA. Q Rev Biophys (1992) 1.84
Interactions of heteroaromatic compounds with nucleic acids. 1. The influence of heteroatoms and polarizability on the base specificity of intercalating ligands. Eur J Biochem (1975) 1.83
Molecular characterization of the GCN4-DNA complex. Proc Natl Acad Sci U S A (1990) 1.82
Climate change and the integrity of science. Science (2010) 1.80
The dimensions of DNA in solution. J Mol Biol (1981) 1.80
Equilibrium studies of ethidium--polynucleotide interactions. Biochemistry (1981) 1.75
Telomere shortening is proportional to the size of the G-rich telomeric 3'-overhang. J Biol Chem (2000) 1.73
A rapid test for the diagnosis of thrombotic thrombocytopenic purpura using surface enhanced laser desorption/ionization time-of-flight (SELDI-TOF)-mass spectrometry. J Thromb Haemost (2006) 1.71
Myopia and night lighting in children in Singapore. Br J Ophthalmol (2001) 1.70
Studies on interaction of anthracycline antibiotics and deoxyribonucleic acid: equilibrium binding studies on interaction of daunomycin with deoxyribonucleic acid. Biochemistry (1982) 1.68
Bent helix formation between RNA hairpins with complementary loops. Science (1995) 1.66
RNA binding assays for Tat-derived peptides: implications for specificity. Biochemistry (1992) 1.65
Free energy of imperfect nucleic acid helices. I. The bulge defect. J Mol Biol (1972) 1.63
Huperzine A for Alzheimer's disease. Cochrane Database Syst Rev (2008) 1.62
Statistical thermodynamics of nucleic acid melting transitions with coupled binding equilibria. Biopolymers (1971) 1.62
Structural basis for DNA bending. Proc Natl Acad Sci U S A (1989) 1.61
The major adduct of the antitumor drug cis-diamminedichloroplatinum(II) with DNA bends the duplex by approximately equal to 40 degrees toward the major groove. Proc Natl Acad Sci U S A (1988) 1.61
Does 5S RNA function by a switch between two secondary structures? Nature (1977) 1.57
Ring closure probabilities for DNA fragments by Monte Carlo simulation. J Mol Biol (1986) 1.56
A bent helix in kinetoplast DNA. Cold Spring Harb Symp Quant Biol (1983) 1.55
Brain metabolic changes in major depressive disorder from pre- to post-treatment with paroxetine. Psychiatry Res (1999) 1.51
The position of site-directed cleavage of RNA using RNase H and 2'-O-methyl oligonucleotides is dependent on the enzyme source. RNA (1997) 1.50
Equilibrium binding of magnesium(II) by Escherichia coli tRNAfMet. Biochemistry (1976) 1.49
RNase H cleavage for processing of in vitro transcribed RNA for NMR studies and RNA ligation. RNA (1996) 1.44
Transmission of allosteric effects in DNA. Nature (1979) 1.44
Catabolite activator protein-induced DNA bending in transcription initiation. J Mol Biol (1991) 1.43
DNA bending by the bulge defect. Biochemistry (1989) 1.43
Characterization of cDNAs for stylar transmitting tissue-specific proline-rich proteins in tobacco. Plant J (1993) 1.42
Comparative gel electrophoresis measurement of the DNA bend angle induced by the catabolite activator protein. Biopolymers (1990) 1.39
Isolation and characterization of a spacerless dinucleosome from H1-deleted chromatin. Nucleic Acids Res (1977) 1.37
NMR of enzymatically synthesized uniformly 13C15N-labeled DNA oligonucleotides. Proc Natl Acad Sci U S A (1995) 1.37
DNA bending in protein-DNA complexes. Methods Enzymol (1991) 1.36
Determinants of RNA hairpin loop-loop complex stability. J Mol Biol (1995) 1.35
Sequence elements responsible for DNA curvature. J Mol Biol (1994) 1.35