Published in Proc Natl Acad Sci U S A on March 01, 1988
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Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli. EMBO J (1989) 3.69
Curved DNA without A-A: experimental estimation of all 16 DNA wedge angles. Proc Natl Acad Sci U S A (1991) 3.61
Use of gel retardation to analyze protein-nucleic acid interactions. Microbiol Rev (1992) 2.35
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DNA supercoiling and environmental regulation of gene expression in pathogenic bacteria. Infect Immun (1991) 2.12
Structure of an alternating-B DNA helix and its relationship to A-tract DNA. Proc Natl Acad Sci U S A (1988) 2.04
Static and statistical bending of DNA evaluated by Monte Carlo simulations. Proc Natl Acad Sci U S A (1991) 1.72
DNA A-tract bending in three dimensions: solving the dA4T4 vs. dT4A4 conundrum. Proc Natl Acad Sci U S A (2004) 1.66
Extraordinary stable structure of short single-stranded DNA fragments containing a specific base sequence: d(GCGAAAGC). Nucleic Acids Res (1989) 1.66
DNA curvature and flexibility in vitro and in vivo. Q Rev Biophys (2010) 1.63
POU proteins bend DNA via the POU-specific domain. EMBO J (1991) 1.62
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The major adduct of the antitumor drug cis-diamminedichloroplatinum(II) with DNA bends the duplex by approximately equal to 40 degrees toward the major groove. Proc Natl Acad Sci U S A (1988) 1.61
Site-specific effect of thymine dimer formation on dAn.dTn tract bending and its biological implications. Proc Natl Acad Sci U S A (1991) 1.43
Structural origins of adenine-tract bending. Proc Natl Acad Sci U S A (2003) 1.41
Influence of the sequence-dependent flexure of DNA on transcription in E. coli. Nucleic Acids Res (1989) 1.39
Sequence of the S-layer gene of Thermus thermophilus HB8 and functionality of its promoter in Escherichia coli. J Bacteriol (1992) 1.31
Myc/Max and other helix-loop-helix/leucine zipper proteins bend DNA toward the minor groove. Proc Natl Acad Sci U S A (1992) 1.30
Analysis of local helix bending in crystal structures of DNA oligonucleotides and DNA-protein complexes. Biophys J (1995) 1.26
Electron microscopy mapping of pBR322 DNA curvature. Comparison with theoretical models. EMBO J (1990) 1.24
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Evidence for opposite groove-directed curvature of GGGCCC and AAAAA sequence elements. Nucleic Acids Res (1993) 1.22
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DNA bending by hexamethylene-tethered ammonium ions. Proc Natl Acad Sci U S A (1996) 1.11
Molecular modelling of (A4T4NN)n and (T4A4NN)n: sequence elements responsible for curvature. Nucleic Acids Res (1996) 1.10
Identification of an enhancer element for the endosperm-specific expression of high molecular weight glutenin. Plant Cell (1990) 1.09
Localization of the intrinsically bent DNA region upstream of the E.coli rrnB P1 promoter. Nucleic Acids Res (1994) 1.08
Location, degree, and direction of DNA bending associated with the Hin recombinational enhancer sequence and Fis-enhancer complex. J Bacteriol (1997) 1.08
A new model for the bending of DNAs containing the oligo(dA) tracts based on NMR observations. Nucleic Acids Res (1990) 1.07
Base sequence-independent distorsions induced by interstrand cross-links in cis-diamminedichloroplatinum (II)-modified DNA. Nucleic Acids Res (1994) 1.00
Large, sequence-dependent effects on DNA conformation by minor groove binding compounds. Nucleic Acids Res (2009) 1.00
Splicing mutations in the CHO DHFR gene preferentially induced by (+/-)-3 alpha,4 beta-dihydroxy-1 alpha,2 alpha-epoxy-1,2,3,4- tetrahydrobenzo[c]phenanthrene. Proc Natl Acad Sci U S A (1990) 1.00
Examining the contribution of a dA+dT element to the conformation of Escherichia coli integration host factor-DNA complexes. Nucleic Acids Res (1996) 0.99
A measure of bending in nucleic acids structures applied to A-tract DNA. Nucleic Acids Res (2010) 0.99
Conformation of reconstituted mononucleosomes and effect of linker histone H1 binding studied by scanning force microscopy. Biophys J (2003) 0.98
Structure-based analysis of DNA sequence patterns guiding nucleosome positioning in vitro. J Biomol Struct Dyn (2010) 0.97
Do basic region-leucine zipper proteins bend their DNA targets ... does it matter? Proc Natl Acad Sci U S A (1996) 0.96
Intrastrand cross-links are not formed in the reaction between transplatin and native DNA: relation with the clinical inefficiency of transplatin. Nucleic Acids Res (1995) 0.95
Distant neighbor base sequence context effects in human nucleotide excision repair of a benzo[a]pyrene-derived DNA lesion. J Mol Biol (2010) 0.95
Curved DNA without AA/TT dinucleotide step. Nucleic Acids Res (1991) 0.93
The effects of sequence context on DNA curvature. Proc Natl Acad Sci U S A (1996) 0.92
DNA interactions of antitumor cisplatin analogs containing enantiomeric amine ligands. Biophys J (2000) 0.91
The leucine zipper may induce electrophoretic mobility anomalies without DNA bending. Proc Natl Acad Sci U S A (1996) 0.91
Characterization of LrpC DNA-binding properties and regulation of Bacillus subtilis lrpC gene expression. J Bacteriol (2000) 0.91
Promoter upstream bent DNA activates the transcription of the Clostridium perfringens phospholipase C gene in a low temperature-dependent manner. EMBO J (1999) 0.91
Sequence-dependent DNA curvature and flexibility from scanning force microscopy images. Biophys J (2002) 0.91
DNA topology of the ordered chromatin domain 5' to the human c-myc gene. Nucleic Acids Res (1989) 0.90
Conformation, protein recognition and repair of DNA interstrand and intrastrand cross-links of antitumor trans-[PtCl2(NH3)(thiazole)]. Nucleic Acids Res (2005) 0.90
An assessment of three dinucleotide parameters to predict DNA curvature by quantitative comparison with experimental data. Nucleic Acids Res (2003) 0.89
Solution structure of a nitrous acid induced DNA interstrand cross-link. Nucleic Acids Res (2004) 0.88
Prod is a novel DNA-binding protein that binds to the 1.686 g/cm(3) 10 bp satellite repeat of Drosophila melanogaster. Nucleic Acids Res (2000) 0.88
Three regions in the DNA of plasmid pLS1 show sequence-directed static bending. Nucleic Acids Res (1988) 0.86
Long-range organization and sequence-directed curvature of Xenopus laevis satellite 1 DNA. Nucleic Acids Res (1993) 0.86
Effect of DNA bending in various regions of a consensus-like Escherichia coli promoter on its strength in vivo and structure of the open complex in vitro. Nucleic Acids Res (1991) 0.85
Identification of sequence elements contributing to the intrinsic curvature of the mouse satellite DNA repeat. Nucleic Acids Res (1991) 0.85
Electrophoretic behavior of d(GGAAAAAAGG)n, d(CCAAAAAACC)n, and (CCAAAAAAGG)n and implications for a DNA bending model. Nucleic Acids Res (1990) 0.85
Effects of phosphate neutralization on the shape of the AP-1 transcription factor binding site in duplex DNA. Nucleic Acids Res (1998) 0.85
Upstream half of adenovirus type 2 enhancer adopts a curved DNA conformation. Nucleic Acids Res (1989) 0.84
DNA with adenine tracts contains poly(dA).poly(dT) conformational features in solution. Nucleic Acids Res (1990) 0.83
Curved DNA molecules migrate anomalously slowly in free solution. Nucleic Acids Res (2005) 0.83
A novel repetitive sequence, termed the JNK repeat family, located on an extra heterochromatic region of chromosome 2R of Japanese rye. Chromosome Res (1999) 0.82
DNA bending and unwinding due to the major 1,2-GG intrastrand cross-link formed by antitumor cis-diamminedichloroplatinum(II) are flanking-base independent. Nucleic Acids Res (2002) 0.82
Polyacrylamide gradient gel electrophoresis for the detection of bended DNA fragments. Nucleic Acids Res (1990) 0.82
Dynamic DNA underpins chromosome dynamics. Biophys J (2013) 0.81
DNA on a tube: electrostatic contribution to stiffness. J Phys Chem B (2008) 0.81
The endonuclease isoschizomers, SmaI and XmaI, bend DNA in opposite orientations. Nucleic Acids Res (1993) 0.81
Unconventional helical phasing of repetitive DNA motifs reveals their relative bending contributions. Nucleic Acids Res (1998) 0.81
A conserved DNA structural control element modulates transcription of a mammalian gene. Nucleic Acids Res (1992) 0.81
A structural analysis of the bent kinetoplast DNA from Crithidia fasciculata by high resolution chemical probing. Nucleic Acids Res (1993) 0.80
Structural characterization of intrinsically curved AT-rich DNA sequences. Nucleic Acids Res (1994) 0.80
Mechanical properties of symmetric and asymmetric DNA A-tracts: implications for looping and nucleosome positioning. Nucleic Acids Res (2014) 0.80
Studying DNA looping by single-molecule FRET. J Vis Exp (2014) 0.79
Measuring shape-dependent looping probability of DNA. Biophys J (2013) 0.79
Electrophoresis in lyotropic polymer liquid crystals. Proc Natl Acad Sci U S A (1998) 0.78
Sequence-directed curvature of repetitive AluI DNA in constitutive heterochromatin of Artemia franciscana. Nucleic Acids Res (1989) 0.78
Diepoxybutane interstrand cross-links induce DNA bending. Biochimie (2011) 0.78
Mesoscopic models for DNA stretching under force: New results and comparison with experiments. Eur Phys J E Soft Matter (2012) 0.77
DNA bending by bHLH charge variants. Nucleic Acids Res (2006) 0.77
Conformational modulation of DNA by polyamide binding: structural effects of f-Im-Py-Im based derivatives on 5'-ACGCGT-3'. J Mol Recognit (2013) 0.75
Organization of DNA in a bacterial nucleoid. BMC Microbiol (2016) 0.75
Structure of the 1,4-bis(2'-deoxyadenosin-N6-yl)-2R,3R-butanediol cross-link arising from alkylation of the human N-ras codon 61 by butadiene diepoxide. Biochemistry (2005) 0.75
Electrophoresis of positioned nucleosomes. Biophys J (2007) 0.75
The locus of sequence-directed and protein-induced DNA bending. Nature (1984) 15.05
DNA bending at adenine . thymine tracts. Nature (1986) 9.25
The structure of an oligo(dA).oligo(dT) tract and its biological implications. Nature (1987) 7.23
Bent helical structure in kinetoplast DNA. Proc Natl Acad Sci U S A (1982) 6.43
Sequence dependence of the helical repeat of DNA in solution. Nature (1981) 5.21
A bifurcated hydrogen-bonded conformation in the d(A.T) base pairs of the DNA dodecamer d(CGCAAATTTGCG) and its complex with distamycin. Proc Natl Acad Sci U S A (1987) 5.14
Sequence-dependent helical periodicity of DNA. Nature (1981) 4.35
Curved DNA: design, synthesis, and circularization. Proc Natl Acad Sci U S A (1986) 3.72
The unusual conformation adopted by the adenine tracts in kinetoplast DNA. Cell (1987) 3.40
Why does the electrophoretic mobility of DNA in gels vary with the length of the molecule? Biopolymers (1982) 3.30
DNA bend direction by phase sensitive detection. Nature (1987) 3.01
Sequence-directed curvature of DNA. Nature (1986) 2.89
An altered DNA conformation in origin region I is a determinant for the binding of SV40 large T antigen. Cell (1986) 2.88
Estimation of wedge components in curved DNA. Nature (1987) 2.82
Direct evidence for DNA bending at the lambda replication origin. Science (1987) 2.76
Evidence for the existence of stable curvature of DNA in solution. Proc Natl Acad Sci U S A (1984) 2.67
Sequence dependence of the curvature of DNA: a test of the phasing hypothesis. Biochemistry (1985) 2.60
Sequence-induced DNA curvature at the bacteriophage lambda origin of replication. Nature (1985) 2.32
Visualization of the bent helix in kinetoplast DNA by electron microscopy. Cell (1986) 2.31
Helical periodicity of DNA, Poly(dA) . poly(dT) and poly(dA-dT). poly(dA-dT) in solution. Eur J Biochem (1981) 2.27
A computer graphics study of sequence-directed bending in DNA. J Biomol Struct Dyn (1983) 1.94
Anomalous structure and properties of poly (dA).poly(dT). Computer simulation of the polynucleotide structure with the spine of hydration in the minor groove. Nucleic Acids Res (1987) 1.93
Static and initiator protein-enhanced bending of DNA at a replication origin. Science (1986) 1.84
Physical characterization of a kinetoplast DNA fragment with unusual properties. J Biol Chem (1984) 1.71
Mobility of DNA in gel electrophoresis. Biopolymers (1982) 1.65
Bending and flexibility of kinetoplast DNA. Biochemistry (1986) 1.65
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Cationic metals promote sequence-directed DNA bending. Biochemistry (1987) 1.37
The structure of poly(dA).poly(dT) as revealed by an X-ray fibre diffraction. J Biomol Struct Dyn (1987) 1.12
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Relaxation kinetics of dimer formation by self complementary oligonucleotides. J Mol Biol (1971) 4.77
Fragments of the HIV-1 Tat protein specifically bind TAR RNA. Science (1990) 4.33
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The DNA binding domain and bending angle of E. coli CAP protein. Cell (1986) 3.99
Intermediates in transcription initiation from the E. coli lac UV5 promoter. Cell (1985) 3.88
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Stability and properties of double and triple helices: dramatic effects of RNA or DNA backbone composition. Science (1992) 3.53
Artificial nucleosome positioning sequences. Proc Natl Acad Sci U S A (1989) 3.38
DNA-ethidium reaction kinetics: demonstration of direct ligand transfer between DNA binding sites. J Mol Biol (1975) 3.35
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The molecular mechanism of thermal unfolding of Escherichia coli formylmethionine transfer RNA. J Mol Biol (1974) 3.25
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The influence of polyvalency on the binding properties of antibodies. Immunochemistry (1972) 2.67
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Equilibrium studies of the cyclic AMP receptor protein-DNA interaction. J Mol Biol (1984) 2.49
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A stressed intermediate in the formation of stably initiated RNA chains at the Escherichia coli lac UV5 promoter. J Mol Biol (1987) 2.00
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The major adduct of the antitumor drug cis-diamminedichloroplatinum(II) with DNA bends the duplex by approximately equal to 40 degrees toward the major groove. Proc Natl Acad Sci U S A (1988) 1.61
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