Published in Protein Eng on September 01, 1988
Retroviral integrase domains: DNA binding and the recognition of LTR sequences. Nucleic Acids Res (1991) 4.39
Toward rules relating zinc finger protein sequences and DNA binding site preferences. Proc Natl Acad Sci U S A (1992) 4.15
Co-evolution from yeast to mouse: cDNA cloning of the two NF-Y (CP-1/CBF) subunits. EMBO J (1990) 2.49
Zinc fingers, zinc clusters, and zinc twists in DNA-binding protein domains. Proc Natl Acad Sci U S A (1991) 2.48
Determination of the base recognition positions of zinc fingers from sequence analysis. EMBO J (1992) 2.31
The segment-specific gene Krox-20 encodes a transcription factor with binding sites in the promoter region of the Hox-1.4 gene. EMBO J (1990) 2.12
The serum-inducible mouse gene Krox-24 encodes a sequence-specific transcriptional activator. Mol Cell Biol (1990) 2.04
The family feud: turning off Sp1 by Sp1-like KLF proteins. Biochem J (2005) 1.83
Evi-1, a murine zinc finger proto-oncogene, encodes a sequence-specific DNA-binding protein. Mol Cell Biol (1991) 1.77
Zinc finger-DNA recognition: analysis of base specificity by site-directed mutagenesis. Nucleic Acids Res (1992) 1.74
Alanine scanning site-directed mutagenesis of the zinc fingers of transcription factor ADR1: residues that contact DNA and that transactivate. Proc Natl Acad Sci U S A (1991) 1.73
Stereochemical basis of DNA recognition by Zn fingers. Nucleic Acids Res (1994) 1.65
Only two of the five zinc fingers of the eukaryotic transcriptional repressor PRDI-BF1 are required for sequence-specific DNA binding. Mol Cell Biol (1992) 1.63
Mutations in the zinc fingers of ADR1 that change the specificity of DNA binding and transactivation. Mol Cell Biol (1992) 1.25
Mode of interaction of the zinc finger protein TFIIIA with a 5S RNA gene of Xenopus. Proc Natl Acad Sci U S A (1990) 1.23
Zinc finger-like structure in U1-specific protein C is essential for specific binding to U1 snRNP. Nucleic Acids Res (1991) 1.22
Basonuclin: a keratinocyte protein with multiple paired zinc fingers. Proc Natl Acad Sci U S A (1992) 1.21
A mouse zinc finger gene which is transiently expressed during spermatogenesis. EMBO J (1990) 1.17
Predicted alpha-helix/beta-sheet secondary structures for the zinc-binding motifs of human papillomavirus E7 and E6 proteins by consensus prediction averaging and spectroscopic studies of E7. Biochem J (1996) 1.07
STP1, a gene involved in pre-tRNA processing, encodes a nuclear protein containing zinc finger motifs. Mol Cell Biol (1992) 1.02
A single amino acid change in CUP2 alters its mode of DNA binding. Mol Cell Biol (1990) 1.02
Isolation and characterization of the disconnected gene of Drosophila melanogaster. EMBO J (1991) 0.97
The Drosophila l(2)35Ba/nocA gene encodes a putative Zn finger protein involved in the development of the embryonic brain and the adult ocellar structures. Mol Cell Biol (1994) 0.95
A gene encoding 22 highly related zinc fingers is expressed in lymphoid cell lines. Nucleic Acids Res (1991) 0.92
Genomic targets of the serendipity beta and delta zinc finger proteins and their respective DNA recognition sites. EMBO J (1991) 0.92
A cluster of related zinc finger protein genes is deleted in the mouse embryonic lethal mutation tw18. Proc Natl Acad Sci U S A (1991) 0.90
Loss of DNA-binding and new transcriptional trans-activation function in polyomavirus large T-antigen with mutation of zinc finger motif. Nucleic Acids Res (1990) 0.85
Highly efficient endonucleolytic cleavage of RNA by a Cys(2)His(2) zinc-finger peptide. Proc Natl Acad Sci U S A (1999) 0.85
A genetic algorithm that seeks native states of peptides and proteins. Biophys J (1995) 0.83
Interactions of the zinc-regulated factor (ZiRF1) with the mouse metallothionein Ia promoter. Biochem J (1997) 0.80
Architectural rules of the zinc-finger motif: comparative two-dimensional NMR studies of native and "aromatic-swap" domains define a "weakly polar switch". Proc Natl Acad Sci U S A (1991) 0.80
Single amino acid exchanges in the finger domain impair the function of the Drosophila gene Krüppel (Kr). Proc Natl Acad Sci U S A (1989) 0.79
Solvation and the hidden thermodynamics of a zinc finger probed by nonstandard repair of a protein crevice. Protein Sci (2004) 0.78
Structures of DNA-binding mutant zinc finger domains: implications for DNA binding. Protein Sci (1993) 0.77
SRS--an indexing and retrieval tool for flat file data libraries. Comput Appl Biosci (1993) 24.73
SRS: information retrieval system for molecular biology data banks. Methods Enzymol (1996) 24.30
Knowledge-based protein secondary structure assignment. Proteins (1995) 14.08
Analysis of insertions/deletions in protein structures. J Mol Biol (1992) 13.12
Weighting aligned protein or nucleic acid sequences to correct for unequal representation. J Mol Biol (1990) 11.50
Human oestrogen receptor cDNA: sequence, expression and homology to v-erb-A. Nature (1986) 11.35
Structure of yeast phenylalanine tRNA at 3 A resolution. Nature (1974) 10.27
New rapid gel sequencing method for RNA. Nature (1977) 9.56
Primary structural comparison of RNA-dependent polymerases from plant, animal and bacterial viruses. Nucleic Acids Res (1984) 8.36
The integrase family of site-specific recombinases: regional similarities and global diversity. EMBO J (1986) 8.12
An attempt to unify the structure of polymerases. Protein Eng (1990) 7.93
Motif recognition and alignment for many sequences by comparison of dot-matrices. J Mol Biol (1991) 7.40
Structure of nucleosome core particles of chromatin. Nature (1977) 6.24
Beta-COP, a 110 kd protein associated with non-clathrin-coated vesicles and the Golgi complex, shows homology to beta-adaptin. Cell (1991) 5.10
A conformational preference parameter to predict helices in integral membrane proteins. Biochim Biophys Acta (1986) 4.91
The primary structure of transcription factor TFIIIA has 12 consecutive repeats. FEBS Lett (1985) 4.73
Structure of yeast phenylalanine transfer RNA at 2.5 A resolution. Proc Natl Acad Sci U S A (1975) 4.57
The chicken oestrogen receptor sequence: homology with v-erbA and the human oestrogen and glucocorticoid receptors. EMBO J (1986) 4.47
Overseer: a nucleotide sequence searching tool. Comput Appl Biosci (1992) 4.46
Cloning of the human cDNA for the U1 RNA-associated 70K protein. EMBO J (1986) 4.43
The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments. EMBO J (1993) 4.11
Prediction of transmembrane segments in proteins utilising multiple sequence alignments. J Mol Biol (1994) 4.07
Outcomes of stroke patients in Medicare fee for service and managed care. JAMA (1997) 3.91
An assessment of amino acid exchange matrices in aligning protein sequences: the twilight zone revisited. J Mol Biol (1995) 3.74
A crystallographic study of metal-binding to yeast phenylalanine transfer RNA. J Mol Biol (1977) 3.71
The structure of bovine rhodopsin. Biophys Struct Mech (1983) 3.33
Estimating hospital costs. A multiple-output analysis. J Health Econ (1986) 3.09
Similarity in gene organization and homology between proteins of animal picornaviruses and a plant comovirus suggest common ancestry of these virus families. Nucleic Acids Res (1984) 2.99
Hereditary renal-cell carcinoma associated with a chromosomal translocation. N Engl J Med (1979) 2.82
Suggestions for "safe" residue substitutions in site-directed mutagenesis. J Mol Biol (1991) 2.80
Resource utilization in liver transplantation: effects of patient characteristics and clinical practice. NIDDK Liver Transplantation Database Group. JAMA (1999) 2.78
Current methods of transfer of young people with Type 1 diabetes to adult services. Diabet Med (2002) 2.76
Thermal stability and protein structure. Biochemistry (1979) 2.73
A data bank merging related protein structures and sequences. Protein Eng (1992) 2.73
Further refinement of the structure of yeast tRNAPhe. J Mol Biol (1978) 2.71
Protein thermal stability, hydrogen bonds, and ion pairs. J Mol Biol (1997) 2.69
A fast and sensitive multiple sequence alignment algorithm. Comput Appl Biosci (1989) 2.66
Survival outcomes following liver transplantation (SOFT) score: a novel method to predict patient survival following liver transplantation. Am J Transplant (2008) 2.63
Degradation of collagen by a human granulocyte collagenolytic system. J Clin Invest (1968) 2.62
The Wiskott-Aldrich syndrome. A disorder with a possible defect in antigen processing or recognition. Lancet (1968) 2.61
A possible nucleotide-binding domain in the tertiary fold of phosphoribosyltransferases. J Biol Chem (1983) 2.60
Oligopeptide biases in protein sequences and their use in predicting protein coding regions in nucleotide sequences. Proteins (1988) 2.57
Structural prediction of membrane-bound proteins. Eur J Biochem (1982) 2.44
Current trends in colorectal cancer: site, incidence, mortality and survival in England and Wales. Clin Oncol (R Coll Radiol) (2001) 2.41
Hodgkin's disease. Immunologic, clinical, and histologic features of 50 untreated patients. Ann Intern Med (1967) 2.38
Human adenosine deaminase. cDNA and complete primary amino acid sequence. J Biol Chem (1984) 2.33
The release of growth arrest by microinjection of adenovirus E1A DNA. EMBO J (1985) 2.32
Side-chain clusters in protein structures and their role in protein folding. J Mol Biol (1991) 2.24
Incorporation of non-local interactions in protein secondary structure prediction from the amino acid sequence. Protein Eng (1996) 2.24
Exploring structural homology of proteins. J Mol Biol (1976) 2.23
Crystallographic and biochemical investigation of the lead(II)-catalyzed hydrolysis of yeast phenylalanine tRNA. Biochemistry (1985) 2.22
Protein folding. Annu Rev Biochem (1981) 2.21
Evidence for a repeating domain in type I restriction enzymes. EMBO J (1985) 2.20
Ribosome-mediated translational pause and protein domain organization. Protein Sci (1996) 2.20
Structure of the Aeromonas toxin proaerolysin in its water-soluble and membrane-channel states. Nature (1994) 2.18
Seventy-five percent accuracy in protein secondary structure prediction. Proteins (1997) 2.16
Alfentanil for conscious sedation during colonoscopy. South Med J (1995) 2.07
Relief of uremic pruritus with ultraviolet phototherapy. N Engl J Med (1977) 2.06
Database comparison of the adult-to-adult living donor liver transplantation cohort study (A2ALL) and the SRTR U.S. Transplant Registry. Am J Transplant (2010) 2.04
Atomic co-ordinates for yeast phenylalanine tRNA. Nucleic Acids Res (1975) 1.98
Intramolecular cavities in globular proteins. Protein Eng (1994) 1.97
Rotamers: to be or not to be? An analysis of amino acid side-chain conformations in globular proteins. J Mol Biol (1993) 1.92
Pb(II)-catalysed cleavage of the sugar-phosphate backbone of yeast tRNAPhe--implications for lead toxicity and self-splicing RNA. Nature (1983) 1.92
Recommendations for the outpatient surveillance of renal transplant recipients. American Society of Transplantation. J Am Soc Nephrol (2000) 1.90
Protein-protein crystal-packing contacts. Protein Sci (1997) 1.89
Automated protein sequence database classification. I. Integration of compositional similarity search, local similarity search, and multiple sequence alignment. Bioinformatics (1998) 1.84
A sensitive procedure to compare amino acid sequences. J Mol Biol (1987) 1.84
Primary structural relationships may reflect similar DNA replication strategies. Virology (1986) 1.81
X-ray diffraction study of a new crystal form of the nucleosome core showing higher resolution. J Mol Biol (1981) 1.81
Sequence analysis and characterization of a maize gene encoding a high-sulfur zein protein of Mr 15,000. J Biol Chem (1986) 1.77
Engineering protein thermal stability. Sequence statistics point to residue substitutions in alpha-helices. J Mol Biol (1989) 1.74
A comparison of the heme binding pocket in globins and cytochrome b5. J Biol Chem (1975) 1.74
A structural model for maize zein proteins. J Biol Chem (1982) 1.73
Topology prediction of membrane proteins. Protein Sci (1996) 1.71
Hepatocellular carcinoma recurrence and death following living and deceased donor liver transplantation. Am J Transplant (2007) 1.70
Refined structure of the pore-forming domain of colicin A at 2.4 A resolution. J Mol Biol (1992) 1.70
Computer simulation of the dynamics of hydrated protein crystals and its comparison with x-ray data. Proc Natl Acad Sci U S A (1983) 1.69
Transforming a set of biological flat file libraries to a fast access network. Comput Appl Biosci (1993) 1.69
Homology between IRE-BP, a regulatory RNA-binding protein, aconitase, and isopropylmalate isomerase. Nucleic Acids Res (1991) 1.68
Human granulocyte collagenase. Science (1968) 1.68
Differing roles for zinc fingers in DNA recognition: structure of a six-finger transcription factor IIIA complex. Proc Natl Acad Sci U S A (1998) 1.67
Impact of virologic breakthrough and HBIG regimen on hepatitis B recurrence after liver transplantation. Am J Transplant (2010) 1.67
Fluorodeoxyglucose uptake in human cancer cell lines is increased by hypoxia. J Nucl Med (1995) 1.67
The home health visit: an appropriate unit for Medicare payment? Health Aff (Millwood) (1996) 1.67
Determination of reliable regions in protein sequence alignments. Protein Eng (1990) 1.66
Mechanism of tumorigenesis of renal carcinomas associated with the constitutional chromosome 3;8 translocation. Cancer J Sci Am (2006) 1.64
Sugar permeases of the bacterial phosphoenolpyruvate-dependent phosphotransferase system: sequence comparisons. FASEB J (1988) 1.64
NADP-dependent enzymes. I: Conserved stereochemistry of cofactor binding. Proteins (1997) 1.63
Clinical relevance of thyroid-stimulating autoantibodies in pediatric graves' disease-a multicenter study. J Clin Endocrinol Metab (2014) 1.63
Fatal Clostridium difficile enteritis after total abdominal colectomy. J Clin Gastroenterol (1996) 1.63
The taxonomy of protein structure. J Mol Biol (1977) 1.61
Automated protein sequence database classification. II. Delineation Of domain boundaries from sequence similarities. Bioinformatics (1998) 1.61
The primary structure of human secretogranin II, a widespread tyrosine-sulfated secretory granule protein that exhibits low pH- and calcium-induced aggregation. J Biol Chem (1989) 1.60
Kallmann syndrome: MR findings. AJNR Am J Neuroradiol (1993) 1.60
Fingers and helices. Nature (1987) 1.59
Three-dimensional Fourier synthesis of calf liver cytochrome b 5 at 2-8 A resolution. J Mol Biol (1972) 1.58
Correlation between three-dimensional structure and chemical reactivity of transfer RNA. Nucleic Acids Res (1974) 1.58
OBSTRUCT: a program to obtain largest cliques from a protein sequence set according to structural resolution and sequence similarity. Comput Appl Biosci (1992) 1.57