Published in Nucleic Acids Res on August 26, 1986
Synonymous codon usage in Drosophila melanogaster: natural selection and translational accuracy. Genetics (1994) 6.83
Codon usage patterns in Escherichia coli, Bacillus subtilis, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Drosophila melanogaster and Homo sapiens; a review of the considerable within-species diversity. Nucleic Acids Res (1988) 4.90
Codon preferences in free-living microorganisms. Microbiol Rev (1990) 4.66
Recent evidence for evolution of the genetic code. Microbiol Rev (1992) 4.32
Codon usage tabulated from the GenBank Genetic Sequence Data. Nucleic Acids Res (1988) 4.26
Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res (1990) 3.54
Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases. Nucleic Acids Res (1987) 3.23
Evolution of codon usage bias in Drosophila. Proc Natl Acad Sci U S A (1997) 3.05
Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res (1991) 3.01
High guanine and cytosine content increases mRNA levels in mammalian cells. PLoS Biol (2006) 2.74
Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases. Nucleic Acids Res (1994) 2.58
Isolation and sequence of complementary DNA encoding human extracellular superoxide dismutase. Proc Natl Acad Sci U S A (1987) 2.20
Sequence analysis suggests that tetra-nucleotides signal the termination of protein synthesis in eukaryotes. Nucleic Acids Res (1990) 2.20
Codon usage bias and base composition of nuclear genes in Drosophila. Genetics (1993) 2.19
Codon usage in higher plants, green algae, and cyanobacteria. Plant Physiol (1990) 1.96
Codon usage and gene expression level in Dictyostelium discoideum: highly expressed genes do 'prefer' optimal codons. Nucleic Acids Res (1989) 1.91
Translation of bicistronic viral mRNA in transfected cells: regulation at the level of elongation. Proc Natl Acad Sci U S A (1990) 1.55
Accelerated evolution of the ASPM gene controlling brain size begins prior to human brain expansion. PLoS Biol (2004) 1.54
Codon usage tabulated from the international DNA sequence databases. Nucleic Acids Res (1996) 1.49
Regional base composition variation along yeast chromosome III: evolution of chromosome primary structure. Nucleic Acids Res (1993) 1.45
The unusual nucleotide content of the HIV RNA genome results in a biased amino acid composition of HIV proteins. Nucleic Acids Res (1994) 1.36
Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes. BMC Evol Biol (2004) 1.30
Evident diversity of codon usage patterns of human genes with respect to chromosome banding patterns and chromosome numbers; relation between nucleotide sequence data and cytogenetic data. Nucleic Acids Res (1991) 1.30
Selection on silent sites in the rodent H3 histone gene family. Genetics (1994) 1.27
The correlation between synonymous and nonsynonymous substitutions in Drosophila: mutation, selection or relaxed constraints? Genetics (1998) 1.21
Precise switching of DNA replication timing in the GC content transition area in the human major histocompatibility complex. Mol Cell Biol (1997) 1.20
Shannon information theoretic computation of synonymous codon usage biases in coding regions of human and mouse genomes. Genome Res (2002) 1.17
The chicken c-fos gene: cloning and nucleotide sequence analysis. J Virol (1987) 1.16
Long range genome structure around the human alpha-globin complex analysed by PFGE. Nucleic Acids Res (1987) 1.15
Variation in G + C-content and codon choice: differences among synonymous codon groups in vertebrate genes. Nucleic Acids Res (1989) 1.10
The 11-1 gene of Plasmodium falciparum codes for distinct fast evolving repeats. EMBO J (1988) 1.08
A compositional map of human chromosome 21. EMBO J (1990) 1.07
5' flanking sequence and structure of a gene encoding rat 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase. Proc Natl Acad Sci U S A (1989) 1.07
Length variation in mitochondrial DNA of the minnow Cyprinella spiloptera. Genetics (1994) 0.99
Human chromosomal bands: nested structure, high-definition map and molecular basis. Chromosoma (2006) 0.99
Intercodon dinucleotides affect codon choice in plant genes. Nucleic Acids Res (2000) 0.95
Expression of human nPTB is limited by extreme suboptimal codon content. PLoS One (2008) 0.92
Molecular evolution of the human Pgk-2 retroposon. Nucleic Acids Res (1990) 0.91
Oligonucleotide correlations between infector and host genomes hint at evolutionary relationships. Nucleic Acids Res (1990) 0.89
Chloroplast genes transferred to the nuclear plant genome have adjusted to nuclear base composition and codon usage. Nucleic Acids Res (1990) 0.88
Base composition and translational selection are insufficient to explain codon usage bias in plant viruses. Viruses (2013) 0.82
Single-stranded genomic architecture constrains optimal codon usage. Bacteriophage (2011) 0.82
Position-associated GC asymmetry of gene duplicates. J Mol Evol (2004) 0.79
Specific selection pressure at the third codon positions: contribution to 10- to 11-base periodicity in prokaryotic genomes. J Mol Evol (2006) 0.77
Molecular evolution of NASP and conserved histone H3/H4 transport pathway. BMC Evol Biol (2014) 0.77
Cancer, Warts, or Asymptomatic Infections: Clinical Presentation Matches Codon Usage Preferences in Human Papillomaviruses. Genome Biol Evol (2015) 0.77
Variation in synonymous codon usage in Paenibacillus sp. 32O-W genome. Bioinformation (2016) 0.75
Codon-Driven Translational Efficiency Is Stable across Diverse Mammalian Cell States. PLoS Genet (2016) 0.75
Large homogeneous genome regions (isochores) in soybean [glycine max (L.) merr]. Front Genet (2012) 0.75
Effects of codon usage on gene expression: empirical studies on Drosophila. J Mol Evol (2015) 0.75
Deconstruction of archaeal genome depict strategic consensus in core pathways coding sequence assembly. PLoS One (2015) 0.75
GC3-biased gene domains in mammalian genomes. Bioinformatics (2015) 0.75
An approach for searching insertions in bacterial genes leading to the phase shift of triplet periodicity. Genomics Proteomics Bioinformatics (2011) 0.75
Codon catalog usage is a genome strategy modulated for gene expressivity. Nucleic Acids Res (1981) 32.85
Codon selection in yeast. J Biol Chem (1982) 19.13
Codon usage and tRNA content in unicellular and multicellular organisms. Mol Biol Evol (1985) 16.88
Codon usage in bacteria: correlation with gene expressivity. Nucleic Acids Res (1982) 12.99
Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes. Gene (1982) 11.99
Codon catalog usage and the genome hypothesis. Nucleic Acids Res (1980) 11.97
Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes. J Mol Biol (1981) 11.87
Nucleotide sequence of the ribosomal protein gene cluster adjacent to the gene for RNA polymerase subunit beta in Escherichia coli. Proc Natl Acad Sci U S A (1979) 9.28
The mosaic genome of warm-blooded vertebrates. Science (1985) 7.54
The GenBank genetic sequence databank. Nucleic Acids Res (1986) 6.71
Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res (1986) 4.83
Codon usage and transfer RNA contents: organism-specific codon-choice patterns in reference to the isoacceptor contents. Cold Spring Harb Symp Quant Biol (1983) 3.12
Structure of the 300A chromatin filament: X-ray diffraction from oriented samples. Cell (1985) 2.54
Nucleotide sequences of the trpG regions of Escherichia coli, Shigella dysenteriae, Salmonella typhimurium and Serratia marcescens. J Mol Biol (1980) 2.13
Structure of the 30 nm chromatin fiber. Cell (1986) 1.93
Preferential use of A- and U-rich codons for Mycoplasma capricolum ribosomal proteins S8 and L6. Nucleic Acids Res (1984) 1.79
Local stability of DNA and RNA secondary structure and its relation to biological functions. Prog Biophys Mol Biol (1986) 1.75
Comparison of the nucleoside sequence of trpA and sequences immediately beyond the trp operon of Klebsiella aerogenes. Salmonella typhimurium and Escherichia coli. Nucleic Acids Res (1981) 1.72
Mechanisms of chromosome banding and implications for chromosome structure. Annu Rev Genet (1978) 1.57
Nucleotide sequence of trpE of Salmonella typhimurium and its homology with the corresponding sequence of Escherichia coli. J Mol Biol (1982) 1.41
Orientation of loci within the human major histocompatibility complex by chromosomal in situ hybridization. Proc Natl Acad Sci U S A (1984) 1.14
Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes. J Mol Biol (1981) 11.87
Codon usage tabulated from international DNA sequence databases: status for the year 2000. Nucleic Acids Res (2000) 7.88
Inhibition of cell migration, spreading, and focal adhesions by tumor suppressor PTEN. Science (1998) 6.62
Small ribonucleic acids of Escherichia coli. I. Characterization by polyacrylamide gel electrophoresis and fingerprint analysis. J Biol Chem (1973) 6.10
Specific inactivation of 16S ribosomal RNA induced by colicin E3 in vivo. Proc Natl Acad Sci U S A (1971) 5.28
Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res (1986) 4.83
Molecular diversity of cell-matrix adhesions. J Cell Sci (1999) 4.33
Codon usage tabulated from the GenBank Genetic Sequence Data. Nucleic Acids Res (1988) 4.26
Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res (1990) 3.54
Codon usage and transfer RNA contents: organism-specific codon-choice patterns in reference to the isoacceptor contents. Cold Spring Harb Symp Quant Biol (1983) 3.12
Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res (1991) 3.01
Codon usage tabulated from the GenBank genetic sequence data. Nucleic Acids Res (1992) 2.95
Identification of spacer tRNA genes in individual ribosomal RNA transcription units of Escherichia coli. Proc Natl Acad Sci U S A (1977) 2.51
Expression of spacer tRNA genes in ribosomal RNA transcription units carried by hybrid Col E1 plasmids in E. coli. Cell (1977) 2.36
CENP-H, a constitutive centromere component, is required for centromere targeting of CENP-C in vertebrate cells. EMBO J (2001) 2.32
Codon usage and tRNA genes in eukaryotes: correlation of codon usage diversity with translation efficiency and with CG-dinucleotide usage as assessed by multivariate analysis. J Mol Evol (2001) 2.20
Global variation in G+C content along vertebrate genome DNA. Possible correlation with chromosome band structures. J Mol Biol (1988) 2.11
Codon usage tabulated from the international DNA sequence databases. Nucleic Acids Res (1997) 2.10
Small ribonucleic acids of Escherichia coli. II. Noncoordinate accumulation during stringent control. J Biol Chem (1973) 1.99
Some rRNA operons in E. coli have tRNA genes at their distal ends. Cell (1978) 1.91
Requirement for the synergy site for cell adhesion to fibronectin depends on the activation state of integrin alpha 5 beta 1. J Biol Chem (1995) 1.91
Bisulfite sequencing and dinucleotide content analysis of 15 imprinted mouse differentially methylated regions (DMRs): paternally methylated DMRs contain less CpGs than maternally methylated DMRs. Cytogenet Genome Res (2006) 1.84
Temperature sensitive mutants of Escherichia coli for tRNA synthesis. Nucleic Acids Res (1974) 1.79
Gross map location of Escherichia coli transfer RNA genes. J Mol Biol (1977) 1.76
Formation of amyloid-like fibrils by self-association of a partially unfolded fibronectin type III module. J Mol Biol (1998) 1.69
Vinexin: a novel vinculin-binding protein with multiple SH3 domains enhances actin cytoskeletal organization. J Cell Biol (1999) 1.65
Precursor molecules of Escherichia coli transfer RNAs accumulated in a temperature-sensitive mutant. J Mol Biol (1975) 1.63
Monoclonal antibody characterization of two distant sites required for function of the central cell-binding domain of fibronectin in cell adhesion, cell migration, and matrix assembly. J Cell Biol (1991) 1.59
Solution structure and dynamics of linked cell attachment modules of mouse fibronectin containing the RGD and synergy regions: comparison with the human fibronectin crystal structure. J Mol Biol (1998) 1.53
Codon usage tabulated from the international DNA sequence databases. Nucleic Acids Res (1996) 1.49
Levels of tRNAs in bacterial cells as affected by amino acid usage in proteins. Nucleic Acids Res (1991) 1.43
Fibronectin regulates calvarial osteoblast differentiation. J Cell Sci (1996) 1.32
Codon usage tabulated from the international DNA sequence databases; its status 1999. Nucleic Acids Res (1999) 1.29
Inhibition of phosphodiesterase 4 attenuates airway hyperresponsiveness and airway inflammation in a model of secondary allergen challenge. Am J Respir Crit Care Med (2001) 1.26
Integrin alpha IIb beta 3 (platelet GPIIb-IIIa) recognizes multiple sites in fibronectin. J Biol Chem (1991) 1.24
Temporal and spatial localization of novel nuclear protein NP95 in mitotic and meiotic cells. Cell Struct Funct (2000) 1.22
Proto-oncogene of int-3, a mouse Notch homologue, is expressed in endothelial cells during early embryogenesis. Genes Cells (1997) 1.21
Precise switching of DNA replication timing in the GC content transition area in the human major histocompatibility complex. Mol Cell Biol (1997) 1.20
Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. Proc Natl Acad Sci U S A (1999) 1.19
Nucleotide sequencing analysis of the 146-kilobase segment around the IkBL and MICA genes at the centromeric end of the HLA class I region. Genomics (1998) 1.15
Giant G+C% mosaic structures of the human genome found by arrangement of GenBank human DNA sequences according to genetic positions. Genomics (1990) 1.14
Nucleotide sequence analysis of the HLA class I region spanning the 237-kb segment around the HLA-B and -C genes. Genomics (1997) 1.13
Creation and characterization of temperature-sensitive CENP-C mutants in vertebrate cells. Nucleic Acids Res (2001) 1.11
CD8 T cells are essential in the development of respiratory syncytial virus-induced lung eosinophilia and airway hyperresponsiveness. J Immunol (1999) 1.10
A unique sequence of the laminin alpha 3 G domain binds to heparin and promotes cell adhesion through syndecan-2 and -4. J Biol Chem (2001) 1.09
Chromosomal localization of the proteasome Z subunit gene reveals an ancient chromosomal duplication involving the major histocompatibility complex. Proc Natl Acad Sci U S A (1996) 1.07
Function and receptor specificity of a minimal 20 kilodalton cell adhesive fragment of fibronectin. Cell Adhes Commun (1995) 1.05
Codon usage tabulated from the international DNA sequence databases. Nucleic Acids Res (1998) 1.03
Cloning of a new kinesin-related gene located at the centromeric end of the human MHC region. Immunogenetics (1994) 1.00
A boundary of long-range G + C% mosaic domains in the human MHC locus: pseudoautosomal boundary-like sequence exists near the boundary. Genomics (1995) 0.99
Genomic anatomy of a premier major histocompatibility complex paralogous region on chromosome 1q21-q22. Genome Res (2001) 0.98
Critical roles for interleukin-4 and interleukin-5 during respiratory syncytial virus infection in the development of airway hyperresponsiveness after airway sensitization. Am J Respir Crit Care Med (2000) 0.98
Temperature-sensitive mutants of Escherichia coli defective in tRNA biosynthesis. Brookhaven Symp Biol (1975) 0.96
Detection of genes in Escherichia coli sequences determined by genome projects and prediction of protein production levels, based on multivariate diversity in codon usage. Comput Appl Biosci (1996) 0.95
Relative locations of the centromere and imprinted SNRPN gene within chromosome 15 territories during the cell cycle in HL60 cells. J Cell Sci (2000) 0.94
Nucleotide sequence and molecular evolution of mouse retrovirus-like IAP elements. Gene (1987) 0.94
Molecular cloning and nucleotide sequence of cDNA for murine senile amyloid protein: nucleotide substitutions found in apolipoprotein A-II cDNA of senescence accelerated mouse (SAM). Nucleic Acids Res (1986) 0.94
Timing of administration of anti-VLA-4 differentiates airway hyperresponsiveness in the central and peripheral airways in mice. Am J Respir Crit Care Med (2000) 0.92
Isolation and characterization of stable hybrid mRNA molecules transcribed from ribosomal protein promoters in E. coli. Cell (1979) 0.92
The distribution of tenascin-X is distinct and often reciprocal to that of tenascin-C. J Cell Biol (1994) 0.92
Extracellular matrix protein tenascin-like gene found in human MHC class III region. Immunogenetics (1992) 0.90
The ActR-I activin receptor protein is expressed in notochord, lens placode and pituitary primordium cells in the mouse embryo. Mech Dev (2000) 0.90
Gene organization of human NOTCH4 and (CTG)n polymorphism in this human counterpart gene of mouse proto-oncogene Int3. Gene (1997) 0.88
The relation between the strong binding of spermine to polynucleotides and the conformation of polynucleotides. Biochim Biophys Acta (1969) 0.88
Transfer of the enhancing effect of respiratory syncytial virus infection on subsequent allergic airway sensitization by T lymphocytes. J Immunol (1999) 0.87
Human pseudoautosomal boundary-like sequences: expression and involvement in evolutionary formation of the present-day pseudoautosomal boundary of human sex chromosomes. Hum Mol Genet (1996) 0.86
Mechanisms of fibronectin and integrin function during cell adhesion and migration. Cold Spring Harb Symp Quant Biol (1992) 0.86
Green fluorescent protein labeling of cytoskeletal structures--novel targeting approach based on leucine zippers. Biotechniques (1998) 0.86
Application of Bead-ELISA method to detect Helicobacter pylori VacA. Microb Pathog (1999) 0.86
Replication timing of the human X-inactivation center (XIC) region: correlation with chromosome bands. Gene (2000) 0.85
Reaction of malonaldehyde with nucleic acid. III. Studies of the fluorescent substances released by enzymatic digestion of nucleic acids modified with malonaldehyde. Chem Pharm Bull (Tokyo) (1986) 0.84
Purification of RNA molecules by gel techniques. Methods Enzymol (1989) 0.84
cDNA cloning of the human homologues of the mouse Ke4 and Ke6 genes at the centromeric end of the human MHC region. Genomics (1996) 0.84
Tenascin-X expression in tumor cells and fibroblasts: glucocorticoids as negative regulators in fibroblasts. J Cell Sci (1996) 0.83
Gene structure, chromosomal localization and immunolocalization of chicken centromere proteins CENP-C and ZW10. Gene (2001) 0.83
Intranuclear arrangement of human chromosome 12 correlates to large-scale replication domains. Chromosoma (2000) 0.83
Vinexin forms a signaling complex with Sos and modulates epidermal growth factor-induced c-Jun N-terminal kinase/stress-activated protein kinase activities. J Biol Chem (1999) 0.83
Methotrexate maintains bone mass by preventing both a decrease in bone formation and an increase in bone resorption in adjuvant-induced arthritic rats. Bone (1997) 0.82
Involvement of neuropeptides in the allergic nasal obstruction in guinea pigs. Jpn J Pharmacol (2001) 0.82
Recombination in the class III region of the mouse major histocompatibility complex. Immunogenetics (1994) 0.81
A sequence homology between the pX genes of HTLV-I/II and the murine IL-3 gene. FEBS Lett (1986) 0.78
Structural analysis of mouse tenascin-X: evolutionary aspects of reduplication of FNIII repeats in the tenascin gene family. Gene (1998) 0.78
Two-dimensional polyacrylamide-gel electrophoresis for purification of small RNAs specified by virulent coliphages T4, T5, T7 and BF23. Eur J Biochem (1975) 0.76
[Measurement of relative amount of E. coli tRNAs: codon choice in E. coli genes is largely constrained by the concentration of anticodons (author's transl)]. Tanpakushitsu Kakusan Koso (1980) 0.76
Effects of changes in plasma pH, CO2 and ammonia on ventilation in trout. Fish Physiol Biochem (1993) 0.75
[Tow-dimensional polyacrylamide gel electrophoresis of RNA species (author's transl)]. Tanpakushitsu Kakusan Koso (1973) 0.75
Changes in urinary deoxypyridinoline level and vertebral bone mass in the development of adjuvant-induced arthritis in rats. Bone (1995) 0.75
Polyadenylic acid-directed binding of oligolysyl transfer RNA to ribosomes. Inhibition by lysyl and deacylated transfer RNA. Biochim Biophys Acta (1969) 0.75
Clustering of transfer RNA genes in bacteriophage BF23. Virology (1978) 0.75
Two-dimensional display of lambda and Escherichia coli restriction fragments separated by Hg-Cs2SO4 centrifugation and gel electrophoresis. Gene (1981) 0.75