Highly plastic chromosomal organization in Salmonella typhi.

PubWeight™: 2.43‹?› | Rank: Top 2%

🔗 View Article (PMC 38379)

Published in Proc Natl Acad Sci U S A on September 17, 1996

Authors

S L Liu1, K E Sanderson

Author Affiliations

1: Department of Biological Sciences, University of Calgary, AB, Canada.

Articles citing this

Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and CT18. J Bacteriol (2003) 5.45

Homing endonucleases: keeping the house in order. Nucleic Acids Res (1997) 5.03

Biodiversity of vibrios. Microbiol Mol Biol Rev (2004) 4.25

The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen. Nucleic Acids Res (2005) 2.21

Clonal expansion and microevolution of quinolone-resistant Salmonella enterica serotype typhi in Vietnam from 1996 to 2004. J Clin Microbiol (2007) 1.84

Salmonella enterica serovar Typhi strains from which SPI7, a 134-kilobase island with genes for Vi exopolysaccharide and other functions, has been deleted. J Bacteriol (2004) 1.79

Limited genetic diversity of Brucella spp. J Clin Microbiol (2001) 1.69

Associations between inverted repeats and the structural evolution of bacterial genomes. Genetics (2003) 1.65

The evolving genome of Salmonella enterica serovar Pullorum. J Bacteriol (2002) 1.57

Single-nucleotide-polymorphism typing and genetic relationships of Salmonella enterica serovar Typhi isolates. J Clin Microbiol (2007) 1.43

Variation of the ribosomal operon 16S-23S gene spacer region in representatives of Salmonella enterica subspecies. J Bacteriol (1998) 1.37

Genomic fluidity of Bordetella pertussis assessed by a new method for chromosomal mapping. J Bacteriol (1997) 1.36

Selection for chromosome architecture in bacteria. J Mol Evol (2006) 1.36

Epidemic typhoid in vietnam: molecular typing of multiple-antibiotic-resistant Salmonella enterica serotype typhi from four outbreaks. J Clin Microbiol (2000) 1.36

A natural large chromosomal inversion in Lactococcus lactis is mediated by homologous recombination between two insertion sequences. J Bacteriol (1998) 1.27

Optical mapping reveals a large genetic inversion between two methicillin-resistant Staphylococcus aureus strains. J Bacteriol (2009) 1.26

An integrative method for accurate comparative genome mapping. PLoS Comput Biol (2006) 1.22

Pandemic spread of cholera: genetic diversity and relationships within the seventh pandemic clone of Vibrio cholerae determined by amplified fragment length polymorphism. J Clin Microbiol (2002) 1.21

Molecular typing of multiple-antibiotic-resistant Salmonella enterica serovar Typhi from Vietnam: application to acute and relapse cases of typhoid fever. J Clin Microbiol (1999) 1.21

Diversity of genome structure in Salmonella enterica serovar Typhi populations. J Bacteriol (2005) 1.15

Chromosomal changes during experimental evolution in laboratory populations of Escherichia coli. J Bacteriol (1999) 1.14

Bacterial phylogenetic clusters revealed by genome structure. J Bacteriol (1999) 1.13

Analysis of Salmonella enterica serotype Typhi pulsed-field gel electrophoresis patterns associated with international travel. J Clin Microbiol (2005) 1.12

Genomic plasticity in natural populations of Bordetella pertussis. J Bacteriol (1999) 1.09

Role of genomic rearrangements in producing new ribotypes of Salmonella typhi. J Bacteriol (1999) 1.08

Chromosomal rearrangements in Salmonella enterica serotype typhi affecting molecular typing in outbreak investigations. J Clin Microbiol (1998) 1.07

Wavelet to predict bacterial ori and ter: a tendency towards a physical balance. BMC Genomics (2003) 1.06

Comparison of genome structures of vibrios, bacteria possessing two chromosomes. J Bacteriol (2002) 1.05

Genomic diversification among archival strains of Salmonella enterica serovar typhimurium LT7. J Bacteriol (2003) 1.05

Structures of homologous composite transposons carrying cbaABC genes from Europe and North America. Appl Environ Microbiol (1998) 1.03

Increasing genetic diversity of Salmonella enterica serovar typhi isolates from papua new guinea over the period from 1992 to 1999. J Clin Microbiol (2002) 1.01

Inversions over the terminus region in Salmonella and Escherichia coli: IS200s as the sites of homologous recombination inverting the chromosome of Salmonella enterica serovar typhi. J Bacteriol (2002) 1.00

Genome plasticity among related ++Lactococcus strains: identification of genetic events associated with macrorestriction polymorphisms. J Bacteriol (2000) 0.99

Rapid approach to determine rrn arrangement in Salmonella serovars. Appl Environ Microbiol (2001) 0.99

Flip-flop around the origin and terminus of replication in prokaryotic genomes. Genome Biol (2001) 0.98

The genome of Salmonella enterica serovar gallinarum: distinct insertions/deletions and rare rearrangements. J Bacteriol (2005) 0.98

Host specificity of bacterial pathogens. Cold Spring Harb Perspect Med (2013) 0.97

Resurgent Vibrio cholerae O139: rearrangement of cholera toxin genetic elements and amplification of rrn operon. Infect Immun (1999) 0.96

Gene transfer between related bacteria by electrotransformation: mapping Salmonella typhi genes in Salmonella typhimurium. J Bacteriol (1998) 0.95

Differential replication dynamics for large and small Vibrio chromosomes affect gene dosage, expression and location. BMC Genomics (2008) 0.94

Distinctive IS200 insertion between gyrA and rcsC genes in Salmonella typhi. J Clin Microbiol (1997) 0.94

Host specific diversity in Lactobacillus johnsonii as evidenced by a major chromosomal inversion and phage resistance mechanisms. PLoS One (2011) 0.91

Diverse genome structures of Salmonella paratyphi C. BMC Genomics (2007) 0.91

Chromosomal rearrangements in Salmonella enterica serovar Typhi strains isolated from asymptomatic human carriers. MBio (2011) 0.89

Group I introns and inteins: disparate origins but convergent parasitic strategies. J Bacteriol (2009) 0.87

Fitness effects of replichore imbalance in Salmonella enterica. J Bacteriol (2010) 0.86

Pigeon-associated strains of Salmonella enterica serovar Typhimurium phage type DT2 have genomic rearrangements at rRNA operons. Infect Immun (2004) 0.82

Chromosomal rearrangements formed by rrn recombination do not improve replichore balance in host-specific Salmonella enterica serovars. PLoS One (2010) 0.81

Homologous Recombination-Experimental Systems, Analysis, and Significance. Ecosal Plus (2011) 0.80

Identification of genes to differentiate closely related Salmonella lineages. PLoS One (2013) 0.79

Genomic comparison of Salmonella typhimurium DT104 with non-DT104 strains. Mol Genet Genomics (2013) 0.77

Differential efficiency in exogenous DNA acquisition among closely related Salmonella strains: implications in bacterial speciation. BMC Microbiol (2014) 0.77

Vibrio cholerae O139 Bengal: combined physical and genetic map and comparative analysis with the genome of V. cholerae O1. J Bacteriol (1998) 0.77

Comparative analysis of the genomes of Shigella dysenteriae type 2 & type 7 isolates. Indian J Med Res (2013) 0.75

Genetic characterization of atypical Citrobacter freundii. PLoS One (2013) 0.75

Articles cited by this

Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol (1981) 29.04

Linkage map of Escherichia coli K-12, edition 8. Microbiol Rev (1990) 18.60

Genomic mapping with I-Ceu I, an intron-encoded endonuclease specific for genes for ribosomal RNA, in Salmonella spp., Escherichia coli, and other bacteria. Proc Natl Acad Sci U S A (1993) 6.89

Evolutionary genetic relationships of clones of Salmonella serovars that cause human typhoid and other enteric fevers. Infect Immun (1990) 6.42

Organization of the bacterial chromosome. Microbiol Rev (1990) 6.01

Clonal nature of Salmonella typhi and its genetic relatedness to other salmonellae as shown by multilocus enzyme electrophoresis, and proposal of Salmonella bongori comb. nov. J Clin Microbiol (1989) 5.21

Inversions between ribosomal RNA genes of Escherichia coli. Proc Natl Acad Sci U S A (1981) 5.03

Molecular relationships among the Salmonelleae. J Bacteriol (1973) 4.35

Summary of an international workshop on typhoid fever. Rev Infect Dis (1986) 4.21

Genetic map of Salmonella typhimurium, edition VIII. Microbiol Rev (1995) 3.87

Genetic relatedness in the family Enterobacteriaceae. Annu Rev Microbiol (1976) 3.76

A physical map of the Salmonella typhimurium LT2 genome made by using XbaI analysis. J Bacteriol (1992) 3.20

Rearrangements in the genome of the bacterium Salmonella typhi. Proc Natl Acad Sci U S A (1995) 3.11

Reference collection of strains of the Salmonella typhimurium complex from natural populations. J Gen Microbiol (1991) 3.00

Gene duplication in bacteria: alteration of gene dosage by sister-chromosome exchanges. Cold Spring Harb Symp Quant Biol (1979) 2.74

The XbaI-BlnI-CeuI genomic cleavage map of Salmonella typhimurium LT2 determined by double digestion, end labelling, and pulsed-field gel electrophoresis. J Bacteriol (1993) 2.27

Genetic duplications induced at very high frequency by ultraviolet irradiation in Escherichia coli. Mol Gen Genet (1973) 2.27

I-CeuI reveals conservation of the genome of independent strains of Salmonella typhimurium. J Bacteriol (1995) 1.98

Transposition of a chromosomal segment bounded by redundant rRNA genes into other rRNA genes in Escherichia coli. J Bacteriol (1982) 1.91

Effects of chromosomal inversion on cell fitness in Escherichia coli K-12. Genetics (1988) 1.81

Molecular techniques in the study of Salmonella typhi in epidemiologic studies in endemic areas: comparison with Vi phage typing. Am J Trop Med Hyg (1986) 1.68

Gene location affects expression level in Salmonella typhimurium. J Bacteriol (1987) 1.57

The chromosome of Salmonella paratyphi A is inverted by recombination between rrnH and rrnG. J Bacteriol (1995) 1.53

The XbaI-BlnI-CeuI genomic cleavage map of Salmonella enteritidis shows an inversion relative to Salmonella typhimurium LT2. Mol Microbiol (1993) 1.52

Genomic cleavage map of Salmonella typhi Ty2. J Bacteriol (1995) 1.46

Mono- and bi-phasic Salmonella typhi: genetic homogeneity and distinguishing characteristics. Mol Microbiol (1992) 1.43

Typing of Salmonella species. Eur J Clin Microbiol Infect Dis (1988) 1.41

Gene rfaH, which affects lipopolysaccharide core structure in Salmonella typhimurium, is required also for expression of F-factor functions. J Bacteriol (1981) 1.38

The XbaI-BlnI-CeuI genomic cleavage map of Salmonella paratyphi B. J Bacteriol (1994) 1.33

Physical mapping of bacterial genomes. J Bacteriol (1995) 1.31

The I-CeuI endonuclease: purification and potential role in the evolution of Chlamydomonas group I introns. Eur J Biochem (1994) 1.22

The size and continuity of DNA segments integrated in Bacillus transformation. Genetics (1995) 1.11

Supplement 1992 (no. 36) to the Kauffmann-White scheme. Res Microbiol (1994) 0.87

Articles by these authors

Complete genome sequence of Salmonella enterica serovar Typhimurium LT2. Nature (2001) 16.89

Linkage map of Salmonella typhimurium, edition VII. Microbiol Rev (1988) 8.37

Linkage map of Salmonella typhimurium, edition IV. Bacteriol Rev (1972) 6.89

Genomic mapping with I-Ceu I, an intron-encoded endonuclease specific for genes for ribosomal RNA, in Salmonella spp., Escherichia coli, and other bacteria. Proc Natl Acad Sci U S A (1993) 6.89

Linkage map of Salmonella typhimurium, edition V. Microbiol Rev (1978) 6.81

Linkage map of Salmonella typhimurium, Edition VI. Microbiol Rev (1983) 6.33

Revised linkage map of Salmonella typhimurium. Bacteriol Rev (1967) 5.22

Current linkage map of Salmonella typhimurium. Bacteriol Rev (1970) 4.60

Genetic relatedness in the family Enterobacteriaceae. Annu Rev Microbiol (1976) 3.76

F + , Hfr, and F' strains of Salmonella typhimurium and Salmonella abony. Bacteriol Rev (1972) 3.73

A physical map of the Salmonella typhimurium LT2 genome made by using XbaI analysis. J Bacteriol (1992) 3.20

Rearrangements in the genome of the bacterium Salmonella typhi. Proc Natl Acad Sci U S A (1995) 3.11

The release of alkaline phosphatase and of lipopolysaccharide during the growth of rough and smooth strains of Salmonella typhimurium. Can J Microbiol (1973) 2.35

The XbaI-BlnI-CeuI genomic cleavage map of Salmonella typhimurium LT2 determined by double digestion, end labelling, and pulsed-field gel electrophoresis. J Bacteriol (1993) 2.27

Uptake and catabolism of D-xylose in Salmonella typhimurium LT2. J Bacteriol (1979) 2.26

Permeability of lipopolysaccharide-deficient (rough) mutants of Salmonella typhimurium to antibiotics, lysozyme, and other agents. Can J Microbiol (1974) 2.10

Cloning of rfaG, B, I, and J genes for glycosyltransferase enzymes for synthesis of the lipopolysaccharide core of Salmonella typhimurium. J Bacteriol (1985) 2.04

I-CeuI reveals conservation of the genome of independent strains of Salmonella typhimurium. J Bacteriol (1995) 1.98

F-prime factors of Salmonella typhimurium and an inversion between S. typhimurium and Escherichia coli. Genetics (1970) 1.60

Comparison of the cell envelope structure of a lipopolysaccharide-defective (heptose-deficient) strain and a smooth strain of Salmonella typhimurium. J Bacteriol (1975) 1.59

The chromosome of Salmonella paratyphi A is inverted by recombination between rrnH and rrnG. J Bacteriol (1995) 1.53

The XbaI-BlnI-CeuI genomic cleavage map of Salmonella enteritidis shows an inversion relative to Salmonella typhimurium LT2. Mol Microbiol (1993) 1.52

Genetics and regulation of D-xylose utilization in Salmonella typhimurium LT2. J Bacteriol (1979) 1.48

Cloning, characterization, and DNA sequence of the rfaLK region for lipopolysaccharide synthesis in Salmonella typhimurium LT2. J Bacteriol (1991) 1.47

Genomic cleavage map of Salmonella typhi Ty2. J Bacteriol (1995) 1.46

Homologous recombination between rrn operons rearranges the chromosome in host-specialized species of Salmonella. FEMS Microbiol Lett (1998) 1.46

Physical maps of the rfa loci of Escherichia coli K-12 and Salmonella typhimurium. J Bacteriol (1991) 1.44

Hemin-deficient mutants of Salmonella typhimurium. J Bacteriol (1970) 1.43

Transformation of Salmonella typhimurium with plasmid DNA: differences between rough and smooth strains. J Bacteriol (1985) 1.40

Gene rfaH, which affects lipopolysaccharide core structure in Salmonella typhimurium, is required also for expression of F-factor functions. J Bacteriol (1981) 1.38

Electrotransformation in Salmonella typhimurium LT2. Can J Microbiol (1991) 1.37

P22-mediated transduction analysis of the rough A (rfa) region of the chromosome of Salmonella typhimurium. J Bacteriol (1972) 1.37

The XbaI-BlnI-CeuI genomic cleavage map of Salmonella paratyphi B. J Bacteriol (1994) 1.33

Insertion of the F factor into the cluster of rfa (rough A) genes of Salmonella typhimurium. J Bacteriol (1972) 1.33

Information transfer in Salmonella typhimurium. Proc Natl Acad Sci U S A (1965) 1.33

The rfaC gene of Salmonella typhimurium. Cloning, sequencing, and enzymatic function in heptose transfer to lipopolysaccharide. J Biol Chem (1992) 1.30

Salmonella typhimurium LT2 possesses three distinct 23S rRNA intervening sequences. J Bacteriol (1996) 1.24

Derepression of F factor function in Salmonella typhimurium. Can J Microbiol (1983) 1.22

Orientation of the isoleucine-valine genes in the Salmonella typhimurium linkage map. Genetics (1966) 1.20

Molecular analysis of the rfaD gene, for heptose synthesis, and the rfaF gene, for heptose transfer, in lipopolysaccharide synthesis in Salmonella typhimurium. J Bacteriol (1994) 1.19

The influence of cations on the permeability of the outer membrane of Salmonella typhimurium and other gram-negative bacteria. Can J Microbiol (1979) 1.18

Cloning and analysis of the sfrB (sex factor repression) gene of Escherichia coli K-12. J Bacteriol (1986) 1.15

Bacterial phylogenetic clusters revealed by genome structure. J Bacteriol (1999) 1.13

Rough mutants of Salmonella typhimurium with defects in the heptose region of the lipopolysaccharide core. Can J Microbiol (1974) 1.10

Role of genomic rearrangements in producing new ribotypes of Salmonella typhi. J Bacteriol (1999) 1.08

Influence of temperature on growth of lipopolysaccharide-deficient (rough) mutants of Salmonella typhimurium and Salmonella minnesota. Can J Microbiol (1976) 1.08

Influence of lipopolysaccharide and protein in the cell envelope on recipient capacity in conjugation of Salmonella typhimurium. J Bacteriol (1981) 1.08

Fragmentation of 23S rRNA in strains of Proteus and Providencia results from intervening sequences in the rrn (rRNA) genes. J Bacteriol (2000) 1.06

Storing, shipping, and maintaining records on bacterial strains. Methods Enzymol (1991) 1.06

Genetics of the Enterobacteriaceae. A. Genetic homology in the Enterobacteriaceae. Adv Genet (1971) 1.02

RNase III deficient Salmonella typhimurium LT2 contains intervening sequences (IVSs) in its 23S rRNA. FEMS Microbiol Lett (1998) 0.99

Porphobilinogen-accumulating mutants of Salmonella typhimurium LT2. J Gen Microbiol (1976) 0.98

Leakage of periplasmic enzymes from lipopolysaccharide-defective mutants of Salmonella typhimurium. Can J Microbiol (1976) 0.98

Intervening sequences in rrl genes and fragmentation of 23S rRNA in genera of the family Enterobacteriaceae. J Bacteriol (2001) 0.96

The location of four fimbrin-encoding genes, agfA, fimA, sefA and sefD, on the Salmonella enteritidis and/or S. typhimurium XbaI-BlnI genomic restriction maps. Gene (1996) 0.92

Salmonella typhi contains identical intervening sequences in all seven rrl genes. J Bacteriol (1996) 0.90

Analysis of the host ranges of transposon bacteriophages Mu, MuhP1, and D108 by use of lipopolysaccharide mutants of Salmonella typhimurium LT2. J Bacteriol (1991) 0.90

Isolation and characterization of hemin-permeable, envelope-defective mutants of Salmonella typhimurium. Can J Microbiol (1981) 0.88

Temperature-sensitive mutants in rfaI and rfaJ, genes for galactosyltransferase I and glucosyltransferase II, for synthesis of lipopolysaccharide in Salmonella typhimurium. Can J Microbiol (1985) 0.88

Sequence diversity of intervening sequences (IVSs) in the 23S ribosomal RNA in Salmonella spp. Gene (2000) 0.85

Distribution of intervening sequences in the genes for 23S rRNA and rRNA fragmentation among strains of the Salmonella reference collection B (SARB) and SARC sets. J Bacteriol (2000) 0.80

Interactions of cations with membrane fractions of smooth and rough strains of Salmonella typhimurium and other Gram-negative bacteria. J Bacteriol (1981) 0.78

Temperature-sensitive, lipopolysaccharide-deficient mutants of Salmonella typhimurium. World J Microbiol Biotechnol (1994) 0.75

Characterization of a mucoid Escherichia coli K12 strain, and chemical analysis of the exopolysaccharide. Can J Microbiol (1972) 0.75