The origin of red algae: implications for plastid evolution.

Protein phylogenies and signature sequences: A reappraisal of evolutionary relationships among archaebacteria, eubacteria, and eukaryotes. Microbiol Mol Biol Rev (1998) 2.96

Microsporidia are related to Fungi: evidence from the largest subunit of RNA polymerase II and other proteins. Proc Natl Acad Sci U S A (1999) 2.72

Did an ancient chlamydial endosymbiosis facilitate the establishment of primary plastids? Genome Biol (2007) 1.82

A mitochondrial-like chaperonin 60 gene in Giardia lamblia: evidence that diplomonads once harbored an endosymbiont related to the progenitor of mitochondria. Proc Natl Acad Sci U S A (1998) 1.68

Complete sequence of the mitochondrial DNA of the red alga Porphyra purpurea. Cyanobacterial introns and shared ancestry of red and green algae. Plant Cell (1999) 1.59

Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements. Eukaryot Cell (2006) 1.44

A multistep process gave rise to RNA polymerase IV of land plants. J Mol Evol (2006) 1.39

Species recognition and clinical relevance of the zygomycetous genus Lichtheimia (syn. Absidia pro parte, Mycocladus). J Clin Microbiol (2010) 1.29

Comparative analysis of the complete plastid genome sequence of the red alga Gracilaria tenuistipitata var. liui provides insights into the evolution of rhodoplasts and their relationship to other plastids. J Mol Evol (2004) 1.13

Experimental design and statistical rigor in phylogenomics of horizontal and endosymbiotic gene transfer. BMC Evol Biol (2011) 1.05

Amitochondriate amoebae and the evolution of DNA-dependent RNA polymerase II. Proc Natl Acad Sci U S A (1998) 1.04

EEF2 analysis challenges the monophyly of Archaeplastida and Chromalveolata. PLoS One (2008) 0.98

Taxonomy and epidemiology of Mucor irregularis, agent of chronic cutaneous mucormycosis. Persoonia (2013) 0.97

Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing. PLoS One (2011) 0.92

A new scenario of plastid evolution: plastid primary endosymbiosis before the divergence of the "Plantae," emended. J Plant Res (2005) 0.89

Phylogeny of tremellomycetous yeasts and related dimorphic and filamentous basidiomycetes reconstructed from multiple gene sequence analyses. Stud Mycol (2015) 0.87

Extensive horizontal gene transfer, duplication, and loss of chlorophyll synthesis genes in the algae. BMC Evol Biol (2015) 0.86

PLMItRNA, a database for mitochondrial tRNA genes and tRNAs in photosynthetic eukaryotes. Nucleic Acids Res (2001) 0.86

Variation in storage alpha-polyglucans of red algae: amylose and semi-amylopectin types in Porphyridium and glycogen type in Cyanidium. Mar Biotechnol (NY) (2006) 0.82

The largest subunit of RNA polymerase II from the Glaucocystophyta: functional constraint and short-branch exclusion in deep eukaryotic phylogeny. BMC Evol Biol (2005) 0.82

Coalescent-based species delimitation approach uncovers high cryptic diversity in the cosmopolitan lichen-forming fungal genus Protoparmelia (Lecanorales, Ascomycota). PLoS One (2015) 0.81

Pleistocene speciation in North American lichenized fungi and the impact of alternative species circumscriptions and rates of molecular evolution on divergence estimates. PLoS One (2013) 0.79

Do photobiont switch and cephalodia emancipation act as evolutionary drivers in the lichen symbiosis? A case study in the Pannariaceae (Peltigerales). PLoS One (2014) 0.79

Integrative taxonomy reveals an unexpected diversity in Geastrum section Geastrum (Geastrales, Basidiomycota). Persoonia (2015) 0.78

Fungal Identification Using Molecular Tools: A Primer for the Natural Products Research Community. J Nat Prod (2017) 0.78

The evolution of CHROMOMETHYLASES and gene body DNA methylation in plants. Genome Biol (2017) 0.76

Horizontal gene transfer in eukaryotic algal evolution. Proc Natl Acad Sci U S A (2003) 0.76

A Molecular Phylogeny of the Lichen Genus Lecidella Focusing on Species from Mainland China. PLoS One (2015) 0.75

Prokaryotic and eukaryotic features observed on the secondary structures of Giardia SSU rRNAs and its phylogenetic implications. Parasitol Res (2007) 0.75

Analysis of fragments of the rpb1 gene sequences of diatoms. Dokl Biochem Biophys (2008) 0.75

Genetic variation and phylogenetic relationships of the ectomycorrhizal Floccularia luteovirens on the Qinghai-Tibet Plateau. J Microbiol (2017) 0.75

Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol (1981) 67.56

CLUSTAL V: improved software for multiple sequence alignment. Comput Appl Biosci (1992) 35.52

Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea. J Mol Evol (1989) 16.24

Phylogenetic meaning of the kingdom concept: an unusual ribosomal RNA from Giardia lamblia. Science (1989) 5.51

The early evolution of eukaryotes: a geological perspective. Science (1992) 4.49

Monophyletic origins of the metazoa: an evolutionary link with fungi. Science (1993) 4.18

Has the endosymbiont hypothesis been proven? Microbiol Rev (1982) 3.86

Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins. Proc Natl Acad Sci U S A (1993) 3.20

Intraspecific diversity and ecological zonation in coral-algal symbiosis. Proc Natl Acad Sci U S A (1995) 3.17

Cryptomonad algae are evolutionary chimaeras of two phylogenetically distinct unicellular eukaryotes. Nature (1991) 3.07

Analysis of the gene encoding the largest subunit of RNA polymerase II in Drosophila. Mol Gen Genet (1989) 2.75

Origin and evolution of organelle genomes. Curr Opin Genet Dev (1993) 2.13

A High-Resolution Gene Map of the Chloroplast Genome of the Red Alga Porphyra purpurea. Plant Cell (1993) 1.97

The unusually long small subunit ribosomal RNA of Phreatamoeba balamuthi. Nucleic Acids Res (1994) 1.89

Trypanosoma brucei contains two RNA polymerase II largest subunit genes with an altered C-terminal domain. Cell (1989) 1.78

An early origin of plastids within the cyanobacterial divergence is suggested by evolutionary trees based on complete 16S rRNA sequences. Mol Biol Evol (1995) 1.75

The mitochondrial DNA of the amoeboid protozoon, Acanthamoeba castellanii: complete sequence, gene content and genome organization. J Mol Biol (1995) 1.69

Evolutionary relationships of eukaryotic kingdoms. J Mol Evol (1996) 1.69

A common evolutionary origin for mitochondria and hydrogenosomes. Proc Natl Acad Sci U S A (1996) 1.64

The chloroplasts of some algal groups may have evolved from endosymbiotic eukaryotic algae. Ann N Y Acad Sci (1981) 1.47

In trypanosomes the homolog of the largest subunit of RNA polymerase II is encoded by two genes and has a highly unusual C-terminal domain structure. Cell (1989) 1.46

Origin of the algae. Nature (1989) 1.37

Substitution rate calibration of small subunit ribosomal RNA identifies chlorarachniophyte endosymbionts as remnants of green algae. Proc Natl Acad Sci U S A (1996) 1.32

An enlarged largest subunit of Plasmodium falciparum RNA polymerase II defines conserved and variable RNA polymerase domains. Nucleic Acids Res (1989) 1.27

Phylogenetic analysis of tufA sequences indicates a cyanobacterial origin of all plastids. Mol Phylogenet Evol (1995) 1.23

Molecular evolutionary analyses of nuclear-encoded small subunit ribosomal RNA identify an independent rhizopod lineage containing the Euglyphina and the Chlorarachniophyta. J Eukaryot Microbiol (1995) 1.17

Complete sequence of the mitochondrial DNA of the rhodophyte Chondrus crispus (Gigartinales). Gene content and genome organization. J Mol Biol (1995) 1.16

A molecular evolutionary framework for eukaryotic model organisms. Curr Biol (1994) 1.11

Homologous domains of the largest subunit of eucaryotic RNA polymerase II are conserved in plants. Mol Gen Genet (1990) 1.11

Protein phylogeny of translation elongation factor EF-1 alpha suggests microsporidians are extremely ancient eukaryotes. J Mol Evol (1996) 1.09

Comparisons of nuclear-encoded small-subunit ribosomal RNAs reveal the evolutionary position of the Glaucocystophyta. Mol Biol Evol (1995) 1.07

Phylogenetic relationship of the kingdoms Animalia, Plantae, and Fungi, inferred from 23 different protein species. Mol Biol Evol (1994) 1.02

Molecular phylogeny of the free-living archezoan Trepomonas agilis and the nature of the first eukaryote. J Mol Evol (1996) 0.99

Analyses of ribosomal RNA sequences from glaucocystophyte cyanelles provide new insights into the evolutionary relationships of plastids. J Mol Evol (1995) 0.97

Cloning and sequence determination of the Schizosaccharomyces pombe rpb1 gene encoding the largest subunit of RNA polymerase II. Nucleic Acids Res (1991) 0.96

Analysis of the genes encoding the largest subunit of RNA polymerase II in Arabidopsis and soybean. Plant Mol Biol (1990) 0.92

Molecular phylogeny of symbiotic dinoflagellates from planktonic foraminifera and radiolaria. Mol Biol Evol (1996) 0.88

The evolutionary origin of red algae as deduced from the nuclear genes encoding cytosolic and chloroplast glyceraldehyde-3-phosphate dehydrogenases from Chondrus crispus. J Mol Evol (1994) 0.86

Isolation, characterization and chromosomal mapping of an actin gene from the primitive red alga Cyanidioschyzon merolae. Curr Genet (1995) 0.85

The marine red alga Chondrus crispus has a highly divergent beta-tubulin gene with a characteristic 5' intron: functional and evolutionary implications. Plant Mol Biol (1995) 0.85

The nuclear gene and cDNAs encoding cytosolic glyceraldehyde-3-phosphate dehydrogenase from the marine red alga Gracilaria verrucosa: cloning, characterization and phylogenetic analysis. Curr Genet (1995) 0.81

Structural features and phylogeny of the actin gene of Chondrus crispus (Gigartinales, Rhodophyta). Curr Genet (1995) 0.80

Codon selection in yeast. J Biol Chem (1982) 19.13

Sequence of the gene for iso-1-cytochrome c in Saccharomyces cerevisiae. Cell (1979) 10.86

Nucleotide sequence of a mutant eukaryotic gene: the yeast tyrosine-inserting ochre suppressor SUP4-o. Proc Natl Acad Sci U S A (1977) 10.64

The primary structure of the Saccharomyces cerevisiae gene for alcohol dehydrogenase. J Biol Chem (1982) 7.03

Deletion mapping of sequences essential for in vivo transcription of the iso-1-cytochrome c gene. Proc Natl Acad Sci U S A (1981) 6.26

The sequence of the DNAs coding for the mating-type loci of Saccharomyces cerevisiae. Cell (1981) 5.23

A position effect in the control of transcription at yeast mating type loci. Nature (1981) 5.23

Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit. Mol Biol Evol (1999) 4.83

Mutation of a heterothallic strain to homothallism. Genetics (1975) 4.09

Macromolecule synthesis and breakdown in relation to sporulation and meiosis in yeast. J Bacteriol (1974) 4.07

Transcriptional regulation of the yeast cytochrome c gene. Proc Natl Acad Sci U S A (1979) 3.85

Synthesis and assembly of hepatitis B virus surface antigen particles in yeast. Nature (1982) 3.82

Isolation and sequence of the gene for iso-2-cytochrome c in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A (1980) 3.62

Identification and isolation of the yeast cytochrome c gene. Cell (1978) 3.39

CHARGE association: an update and review for the primary pediatrician. Clin Pediatr (Phila) (1998) 3.33

Identification of the yeast DNA sequences that correspond to specific tyrosine-inserting nonsense suppressor loci. J Mol Biol (1979) 3.29

Mutations of the yeast SUP4 tRNATyr locus: transcription of the mutant genes in vitro. Cell (1980) 3.24

Isolation and characterization of non-defective transducing elements of bacteriophage phi-80. Virology (1967) 3.15

In vitro mutation analysis of the mating-type locus in yeast. Cell (1981) 3.09

Choanal atresia and associated multiple anomalies. J Pediatr (1979) 2.98

Older paternal age and fresh gene mutation: data on additional disorders. J Pediatr (1975) 2.97

Effects of tRNATyr point mutations on the binding of yeast RNA polymerase III transcription factor C. J Biol Chem (1986) 2.55

The amniotic band disruption complex: timing of amniotic rupture and variable spectra of consequent defects. J Pediatr (1979) 2.46

Expression of a human gene for interferon in yeast. Nature (1981) 2.46

Transcription in yeast: separation and properties of multiple FNA polymerases. Proc Natl Acad Sci U S A (1972) 2.45

Cloning of the yeast tyrosine transfer RNA genes in bacteriophage lambda. J Mol Biol (1979) 2.44

Mating type and sporulation in yeast. I. Mutations which alter mating-type control over sporulation. Genetics (1975) 2.41

Isolation of a gene from Drosophila by complementation in yeast. Nature (1981) 2.30

The primary structure of the alcohol dehydrogenase gene from the fission yeast Schizosaccharomyces pombe. J Biol Chem (1983) 2.29

Incidence of fibrocystic disease in Wessex. J Med Genet (1968) 2.22

Transcription initiation of eucaryotic transfer RNA genes. Cell (1982) 2.18

THE OCCURRENCE OF NATURAL DNA-RNA COMPLEXES IN E. COLI INFECTED WITH T2. Proc Natl Acad Sci U S A (1961) 2.12

Yeast cytochrome c messenger RNA. In vitro translation and specific immunoprecipitation of the CYC1 gene product. J Biol Chem (1976) 2.07

Mutations at the yeast SUP4 tRNATyr locus: DNA sequence changes in mutants lacking suppressor activity. Cell (1980) 2.04

Isolation of the structural gene for alcohol dehydrogenase by genetic complementation in yeast. Nature (1980) 2.03

A new syndrome with hypotonia, obesity, mental deficiency, and facial, oral, ocular, and limb anomalies. J Pediatr (1973) 1.98

An in vitro RNA polymerase III system from S. cerevisiae: effects of deletions and point mutations upon SUP4 gene transcription. Nucleic Acids Res (1982) 1.93

The promoter sequence of a yeast tRNAtyr gene. Cell (1983) 1.91

Only one of two closely related yeast suppressor tRNA genes contains an intervening sequence. Nature (1981) 1.87

Effects of alterations in the 3' flanking sequence on in vivo and in vitro expression of the yeast SUP4-o tRNATyr gene. EMBO J (1985) 1.87

Penetrance and variability in neurofibromatosis: a genetic study of 60 families. Birth Defects Orig Artic Ser (1979) 1.85

Femoral hypoplasia--unusual facies syndrome. J Pediatr (1975) 1.84

Xylose isomerase from Escherichia coli. Characterization of the protein and the structural gene. J Biol Chem (1984) 1.82

The OEIS complex (omphalocele, exstrophy, imperforate anus, spinal defects). Birth Defects Orig Artic Ser (1978) 1.79

Meier-Gorlin syndrome: report of eight additional cases and review. Am J Med Genet (2001) 1.76

The Marfan syndrome locus: confirmation of assignment to chromosome 15 and identification of tightly linked markers at 15q15-q21.3. Genomics (1991) 1.75

Costello syndrome: phenotype, natural history, differential diagnosis, and possible cause. J Pediatr (1998) 1.74

Structural features of yeast tRNA genes which affect transcription factor binding. EMBO J (1984) 1.73

Type of mutation in the neurofibromatosis type 2 gene (NF2) frequently determines severity of disease. Am J Hum Genet (1996) 1.70

Physical analysis of the CYC1-sup4 interval in Saccharomyces cerevisiae. Mol Cell Biol (1981) 1.68

Genetic analysis of the processing of a spliced tRNA. EMBO J (1982) 1.67

Structure of the Schizosaccharomyces pombe cytochrome c gene. Mol Cell Biol (1982) 1.58

Physical analysis of mating-type loci in Saccharomyces cerevisiae. Cold Spring Harb Symp Quant Biol (1981) 1.58

Transforming activity in single-stranded DNA from Bacillus subtilis. J Mol Biol (1968) 1.57

Prader-Willi syndrome. A resumé of 32 cases including an instance of affected first cousins, one of whom is of normal stature and intelligence. J Pediatr (1972) 1.55

Mating type and sporulation in yeast. II. Meiosis, recombination, and radiation sensitivity in an alpha-alpha diploid with altered sporulation control. Genetics (1975) 1.54

Gene size differentially affects the binding of yeast transcription factor tau to two intragenic regions. Proc Natl Acad Sci U S A (1987) 1.53

Prenatal genetic diagnosis in 3000 amniocenteses. N Engl J Med (1979) 1.50

Fibroblast growth factor receptor 2 mutations in Beare-Stevenson cutis gyrata syndrome. Nat Genet (1996) 1.49

Molecular characterisation of the tyrosine tRNA genes of yeast. Nature (1977) 1.44

Level of tryptophan messenger RNA in Escherichia coli. J Mol Biol (1968) 1.43

Transcription in yeast: alpha-amanitin sensitivity and other properties which distinguish between RNA polymerases I and III. Proc Natl Acad Sci U S A (1976) 1.42

Importance of the forest canopy to fluxes of methyl mercury and total mercury to boreal ecosystems. Environ Sci Technol (2001) 1.41

Macrocephaly-cutis marmorata telangiectatica congenita: a distinct disorder with developmental delay and connective tissue abnormalities. Am J Med Genet (1997) 1.38

Holoprosencephaly due to mutations in ZIC2: alanine tract expansion mutations may be caused by parental somatic recombination. Hum Mol Genet (2001) 1.38

Confirmation of the Cohen syndrome. J Pediatr (1978) 1.35

Expression of the Escherichia coli xylose isomerase gene in Saccharomyces cerevisiae. Appl Environ Microbiol (1987) 1.35

Hypochondroplasia: clinical and radiological aspects in 39 cases. Radiology (1979) 1.34

The center-satellite system for the wide-scale distribution of genetic counseling services. Am J Hum Genet (1975) 1.33

Antisense suppression of tomato endo-1,4-beta-glucanase Cel2 mRNA accumulation increases the force required to break fruit abscission zones but does not affect fruit softening. Plant Mol Biol (1999) 1.31

The RET1 gene of yeast encodes the second-largest subunit of RNA polymerase III. Structural analysis of the wild-type and ret1-1 mutant alleles. J Biol Chem (1991) 1.31

Tetraploidy in a liveborn infant. J Med Genet (1976) 1.31

A yeast mutant defective in the processing of 27S r-RNA precursor. Mol Gen Genet (1976) 1.30

Mutations at the Saccharomyces cerevisiae SUP4 tRNA(Tyr) locus: isolation, genetic fine-structure mapping, and correlation with physical structure. Mol Cell Biol (1982) 1.29

TAP1, a yeast gene that activates the expression of a tRNA gene with a defective internal promoter. Mol Cell Biol (1993) 1.27

Etiologic factors in the amniotic band syndrome: a study of 24 patients. Birth Defects Orig Artic Ser (1977) 1.25

DNA sequence elements required for transcription initiation of the Schizosaccharomyces pombe ADH gene in Saccharomyces cerevisiae. Mol Gen Genet (1990) 1.25

Aglossia-adactylia. Birth Defects Orig Artic Ser (1971) 1.23

Do some patients with Seckel syndrome have hematological problems and/or chromosome breakage? Am J Med Genet (1987) 1.23

Evolutionary complementation for polymerase II CTD function. Yeast (2000) 1.22

Purines are required at the 5' ends of newly initiated RNAs for optimal RNA polymerase III gene expression. Mol Cell Biol (1996) 1.21

Campomelic dysplasia. Further elucidation of a distinct entity. Am J Dis Child (1980) 1.20

The Coffin-Siris syndrome: five new cases including two siblings. Am J Dis Child (1978) 1.19

Thumb polydactyly as a part of the range of genetic expression for thenar hypoplasia. Clin Pediatr (Phila) (1987) 1.18

Langer-Giedion syndrome. Birth Defects Orig Artic Ser (1974) 1.17

Long-branch attraction and the rDNA model of early eukaryotic evolution. Mol Biol Evol (1999) 1.16

Nucleotide sequence of the GDH gene coding for the NADP-specific glutamate dehydrogenase of Saccharomyces cerevisiae. Gene (1985) 1.15

Brief clinical report: a new syndrome of hemangiomatous branchial clefts, lip pseudoclefts, and unusual facial appearance. Am J Med Genet (1983) 1.13

Alpha-thalassemia/mental retardation syndrome often confused with other disorders. Am J Med Genet (1992) 1.12

Duplication (partial trisomy) of the distal long arm of chromosome 17: a new clinically recognizable chromosome disorder. Birth Defects Orig Artic Ser (1978) 1.12

Structure of the yeast TAP1 protein: dependence of transcription activation on the DNA context of the target gene. Mol Cell Biol (1993) 1.12

Syndromes and situations associated with congenital clavicular hypoplasia or agenesis. Prog Clin Biol Res (1982) 1.12

A pattern of craniofacial and limb defects secondary to aberrant tissue bands. J Pediatr (1974) 1.11

Mental retardation and multiple congenital anomalies of unknown etiology: frequency of occurrence in similarly affected sibs of the proband. Birth Defects Orig Artic Ser (1978) 1.11

Familial congenital bowing with short bones. Radiology (1979) 1.10

Albinism and agenesis of the corpus callosum with profound developmental delay: Vici syndrome, evidence for autosomal recessive inheritance. Am J Med Genet (1999) 1.10

Termination-altering mutations in the second-largest subunit of yeast RNA polymerase III. Mol Cell Biol (1995) 1.09

The Potter sequence: a clinical analysis of 80 cases. Am J Med Genet (1984) 1.08

ret1-1, a yeast mutant affecting transcription termination by RNA polymerase III. Genetics (1990) 1.07

Generalized osseous abnormalities in the Marshall syndrome. Birth Defects Orig Artic Ser (1976) 1.07