Within- and between-species DNA sequence variation and the 'footprint' of natural selection.

Codon-substitution models for heterogeneous selection pressure at amino acid sites. Genetics (2000) 14.84

Positive and negative selection on the human genome. Genetics (2001) 7.25

Copy number variation and evolution in humans and chimpanzees. Genome Res (2008) 2.69

Regions of lower crossing over harbor more rare variants in African populations of Drosophila melanogaster. Genetics (2001) 2.34

Weak selection revealed by the whole-genome comparison of the X chromosome and autosomes of human and chimpanzee. Proc Natl Acad Sci U S A (2005) 1.67

Melamine deaminase and atrazine chlorohydrolase: 98 percent identical but functionally different. J Bacteriol (2001) 1.61

An examination of positive selection and changing effective population size in Angus and Holstein cattle populations (Bos taurus) using a high density SNP genotyping platform and the contribution of ancient polymorphism to genomic diversity in Domestic cattle. BMC Genomics (2009) 1.57

Intron size and exon evolution in Drosophila. Genetics (2005) 1.56

Positive and negative selection on noncoding DNA in Drosophila simulans. Mol Biol Evol (2008) 1.47

Estimating the distribution of selection coefficients from phylogenetic data using sitewise mutation-selection models. Genetics (2011) 1.45

Molecular footprint of drug-selective pressure in a human immunodeficiency virus transmission chain. J Virol (2005) 1.36

The power of phylogenetic comparison in revealing protein function. Proc Natl Acad Sci U S A (2005) 1.31

Correlated evolution of synonymous and nonsynonymous sites in Drosophila. J Mol Evol (2004) 1.27

MBEToolbox: a MATLAB toolbox for sequence data analysis in molecular biology and evolution. BMC Bioinformatics (2005) 1.17

Weak selection and protein evolution. Genetics (2012) 1.09

Contrasting molecular population genetics of four hexokinases in Drosophila melanogaster, D. simulans and D. yakuba. Genetics (2000) 0.98

Mutation exposed: a neutral explanation for extreme base composition of an endosymbiont genome. J Mol Evol (2004) 0.94

A penalized-likelihood method to estimate the distribution of selection coefficients from phylogenetic data. Genetics (2014) 0.93

Adaptive molecular evolution of the Major Histocompatibility Complex genes, DRA and DQA, in the genus Equus. BMC Evol Biol (2011) 0.91

Selection shapes malaria genomes and drives divergence between pathogens infecting hominids versus rodents. BMC Evol Biol (2008) 0.86

Shifts in the selection-drift balance drive the evolution and epidemiology of foot-and-mouth disease virus. J Virol (2008) 0.86

Selection at the amino acid level can influence synonymous codon usage: implications for the study of codon adaptation in plastid genes. Genetics (2001) 0.83

Endosymbiont evolution: predictions from theory and surprises from genomes. Ann N Y Acad Sci (2015) 0.83

Effect of exonic splicing regulation on synonymous codon usage in alternatively spliced exons of Dscam. BMC Evol Biol (2009) 0.81

Unravelling selection shifts among foot-and-mouth disease virus (FMDV) serotypes. Evol Bioinform Online (2007) 0.80

Varying influences of selection and demography in host-adapted populations of the tick-transmitted bacterium, Anaplasma phagocytophilum. BMC Evol Biol (2015) 0.80

Detecting natural selection at the molecular level: a reexamination of some "classic" examples of adaptive evolution. J Mol Evol (2006) 0.78

Variation in the intensity of selection on codon bias over time causes contrasting patterns of base composition evolution in Drosophila. Genome Biol Evol (2017) 0.76