Published in Differentiation on June 01, 2002
A haplome alignment and reference sequence of the highly polymorphic Ciona savignyi genome. Genome Biol (2007) 1.82
Electroporation of cDNA/Morpholinos to targeted areas of embryonic CNS in Xenopus. BMC Dev Biol (2007) 1.44
Germ-line transgenesis of the Tc1/mariner superfamily transposon Minos in Ciona intestinalis. Proc Natl Acad Sci U S A (2003) 1.13
Ciona intestinalis as a model for cardiac development. Semin Cell Dev Biol (2006) 1.06
Evolutionary changes in the notochord genetic toolkit: a comparative analysis of notochord genes in the ascidian Ciona and the larvacean Oikopleura. BMC Evol Biol (2011) 0.92
Cis-regulatory organization of the Pax6 gene in the ascidian Ciona intestinalis. Dev Biol (2008) 0.87
New insights into the evolution of metazoan tyrosinase gene family. PLoS One (2012) 0.86
Initial deployment of the cardiogenic gene regulatory network in the basal chordate, Ciona intestinalis. Dev Biol (2012) 0.86
Temporal regulation of the muscle gene cascade by Macho1 and Tbx6 transcription factors in Ciona intestinalis. J Cell Sci (2010) 0.85
Tbx2/3 is an essential mediator within the Brachyury gene network during Ciona notochord development. Development (2013) 0.84
Functional Brachyury binding sites establish a temporal read-out of gene expression in the Ciona notochord. PLoS Biol (2013) 0.83
Optimized conditions for transgenesis of the ascidian Ciona using square wave electroporation. Dev Genes Evol (2012) 0.80
Effects of in ovo electroporation on endogenous gene expression: genome-wide analysis. Neural Dev (2011) 0.78
Insulin-like genes in ascidians: findings in Ciona and hypotheses on the evolutionary origins of the pancreas. Genesis (2014) 0.75
TCF/Lef regulates the Gsx ParaHox gene in central nervous system development in chordates. BMC Evol Biol (2016) 0.75
Genome-wide identification and characterization of transcription start sites and promoters in the tunicate Ciona intestinalis. Genome Res (2015) 0.75
The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science (2002) 11.11
RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo. Nat Genet (2007) 9.56
Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome. Proc Natl Acad Sci U S A (2002) 8.56
Whole-genome ChIP-chip analysis of Dorsal, Twist, and Snail suggests integration of diverse patterning processes in the Drosophila embryo. Genes Dev (2007) 4.59
Whole-genome analysis of dorsal-ventral patterning in the Drosophila embryo. Cell (2002) 4.00
Synchronous and stochastic patterns of gene activation in the Drosophila embryo. Science (2009) 3.58
Genomic regulatory networks and animal development. Dev Cell (2005) 3.01
Characterization of the intergenic RNA profile at abdominal-A and Abdominal-B in the Drosophila bithorax complex. Proc Natl Acad Sci U S A (2002) 2.94
Regulatory blueprint for a chordate embryo. Science (2006) 2.67
Shadow enhancers foster robustness of Drosophila gastrulation. Curr Biol (2010) 2.63
Immunity regulatory DNAs share common organizational features in Drosophila. Mol Cell (2004) 2.58
A regulatory code for neurogenic gene expression in the Drosophila embryo. Development (2004) 2.41
miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data. Genome Biol (2010) 2.18
Dorsal gradient networks in the Drosophila embryo. Dev Biol (2002) 2.18
Coordinate enhancers share common organizational features in the Drosophila genome. Proc Natl Acad Sci U S A (2004) 1.90
Multiple enhancers ensure precision of gap gene-expression patterns in the Drosophila embryo. Proc Natl Acad Sci U S A (2011) 1.80
Promoter-proximal tethering elements regulate enhancer-promoter specificity in the Drosophila Antennapedia complex. Proc Natl Acad Sci U S A (2002) 1.74
pyramus and thisbe: FGF genes that pattern the mesoderm of Drosophila embryos. Genes Dev (2004) 1.73
Ciona intestinalis: an emerging model for whole-genome analyses. Trends Genet (2003) 1.69
Quantitative analysis of binding motifs mediating diverse spatial readouts of the Dorsal gradient in the Drosophila embryo. Proc Natl Acad Sci U S A (2005) 1.67
Clusters of temporal discordances reveal distinct embryonic patterning mechanisms in Drosophila and anopheles. PLoS Biol (2011) 1.65
The snail repressor inhibits release, not elongation, of paused Pol II in the Drosophila embryo. Curr Biol (2011) 1.63
Regulation of Hox gene activity by transcriptional elongation in Drosophila. Curr Biol (2009) 1.55
Stalled Hox promoters as chromosomal boundaries. Genes Dev (2009) 1.55
A simplified miRNA-based gene silencing method for Drosophila melanogaster. Dev Biol (2008) 1.54
Neural-specific elongation of 3' UTRs during Drosophila development. Proc Natl Acad Sci U S A (2011) 1.40
Mechanisms of transcriptional precision in animal development. Trends Genet (2012) 1.38
Genome-wide identification of tissue-specific enhancers in the Ciona tadpole. Proc Natl Acad Sci U S A (2002) 1.36
Evolutionary origins of the vertebrate heart: Specification of the cardiac lineage in Ciona intestinalis. Proc Natl Acad Sci U S A (2003) 1.34
The transcription/migration interface in heart precursors of Ciona intestinalis. Science (2008) 1.32
Early chordate origins of the vertebrate second heart field. Science (2010) 1.31
Identification of a rudimentary neural crest in a non-vertebrate chordate. Nature (2012) 1.30
Long-range enhancer-promoter interactions in the Scr-Antp interval of the Drosophila Antennapedia complex. Proc Natl Acad Sci U S A (2003) 1.30
Uncoupling heart cell specification and migration in the simple chordate Ciona intestinalis. Development (2005) 1.27
Decoding cis-regulatory DNAs in the Drosophila genome. Curr Opin Genet Dev (2002) 1.26
Coordinated regulation of cholinergic motor neuron traits through a conserved terminal selector gene. Nat Neurosci (2011) 1.26
Developmental and evolutionary basis for drought tolerance of the Anopheles gambiae embryo. Dev Biol (2009) 1.26
Localized repressors delineate the neurogenic ectoderm in the early Drosophila embryo. Dev Biol (2005) 1.23
Ventral dominance governs sequential patterns of gene expression across the dorsal-ventral axis of the neuroectoderm in the Drosophila embryo. Dev Biol (2003) 1.19
Whole-genome analysis of Drosophila gastrulation. Curr Opin Genet Dev (2004) 1.18
A genomewide survey of developmentally relevant genes in Ciona intestinalis. I. Genes for bHLH transcription factors. Dev Genes Evol (2003) 1.18
ELAV mediates 3' UTR extension in the Drosophila nervous system. Genes Dev (2012) 1.16
Linear signaling in the Toll-Dorsal pathway of Drosophila: activated Pelle kinase specifies all threshold outputs of gene expression while the bHLH protein Twist specifies a subset. Development (2002) 1.16
International EMS systems: The United States: past, present, and future. Resuscitation (2004) 1.14
Precision of hunchback expression in the Drosophila embryo. Curr Biol (2012) 1.14
Gene regulatory networks underlying the compartmentalization of the Ciona central nervous system. Development (2008) 1.12
A genomewide survey of developmentally relevant genes in Ciona intestinalis. II. Genes for homeobox transcription factors. Dev Genes Evol (2003) 1.11
Rapid transcription fosters coordinate snail expression in the Drosophila embryo. Cell Rep (2013) 1.10
Analysis of the Tribolium homeotic complex: insights into mechanisms constraining insect Hox clusters. Dev Genes Evol (2008) 1.09
The cardiovascular effects of cocaine. J Emerg Med (2005) 1.08
Electroporation of transgenic DNAs in the sea squirt Ciona. Cold Spring Harb Protoc (2009) 1.07
The Snail repressor positions Notch signaling in the Drosophila embryo. Development (2002) 1.06
Organization of developmental enhancers in the Drosophila embryo. Nucleic Acids Res (2009) 1.06
Acute Methylenedioxypyrovalerone Toxicity. J Med Toxicol (2015) 1.04
The polycomb group mutant esc leads to augmented levels of paused Pol II in the Drosophila embryo. Mol Cell (2011) 1.02
Neural tube patterning by Ephrin, FGF and Notch signaling relays. Development (2011) 1.02
FGF signaling establishes the anterior border of the Ciona neural tube. Development (2012) 1.00
The Drosophila gap gene network is composed of two parallel toggle switches. PLoS One (2011) 1.00
Evolving enhancer-promoter interactions within the tinman complex of the flour beetle, Tribolium castaneum. Development (2009) 0.99
A genomewide survey of developmentally relevant genes in Ciona intestinalis. III. Genes for Fox, ETS, nuclear receptors and NFkappaB. Dev Genes Evol (2003) 0.98
Conservation patterns in different functional sequence categories of divergent Drosophila species. Genomics (2006) 0.97
Ethanol ingestion in two infants under 2 months old: a previously unreported cause of ALTE. Pediatrics (2013) 0.93
Vectors and parameters that enhance the efficacy of RNAi-mediated gene disruption in transgenic Drosophila. Proc Natl Acad Sci U S A (2010) 0.93
Spatio-temporal intersection of Lhx3 and Tbx6 defines the cardiac field through synergistic activation of Mesp. Dev Biol (2009) 0.92
Neuronal subtype specification in the spinal cord of a protovertebrate. Development (2011) 0.91
FGF3 in the floor plate directs notochord convergent extension in the Ciona tadpole. Development (2008) 0.91
Transcriptional repression via antilooping in the Drosophila embryo. Proc Natl Acad Sci U S A (2012) 0.89
Tail morphogenesis in the ascidian, Ciona intestinalis, requires cooperation between notochord and muscle. Dev Biol (2002) 0.89
Isolation of sea squirt (Ciona) gametes, fertilization, dechorionation, and development. Cold Spring Harb Protoc (2009) 0.89
Whole-mount in situ hybridization on sea squirt (Ciona intestinalis) embryos. Cold Spring Harb Protoc (2009) 0.89
CtBP-independent repression in the Drosophila embryo. Mol Cell Biol (2003) 0.89
Media effects of experimental presentation of the ideal physique on eating disorder symptoms: a meta-analysis of laboratory studies. Clin Psychol Rev (2012) 0.89
BMP signaling coordinates gene expression and cell migration during precardiac mesoderm development. Dev Biol (2009) 0.88
Mosaic and regulative development: two faces of one coin. Curr Biol (2006) 0.88
Unraveling genomic regulatory networks in the simple chordate, Ciona intestinalis. Genome Res (2005) 0.88
Time series analysis of human and bovine brucellosis in South Korea from 2005 to 2010. Prev Vet Med (2012) 0.88
Control of intercalation is cell-autonomous in the notochord of Ciona intestinalis. Dev Biol (2002) 0.86
Modified reperfusion and ischemia-reperfusion injury in human lung transplantation. J Thorac Cardiovasc Surg (2003) 0.86
Liberalization of donor criteria in lung transplantation. Am Surg (2003) 0.84
The sea squirt Ciona intestinalis. Cold Spring Harb Protoc (2009) 0.84
p120RasGAP mediates ephrin/Eph-dependent attenuation of FGF/ERK signals during cell fate specification in ascidian embryos. Development (2013) 0.84
Whole-genome expression profiles identify gene batteries in Drosophila. Dev Cell (2002) 0.84
Morphogen gradients: limits to signaling or limits to measurement? Curr Biol (2010) 0.82
Case files of the medical toxicology fellowship at Banner Good Samaritan Medical Center in Phoenix, AZ: methemoglobinemia following dapsone exposure. J Med Toxicol (2011) 0.82
Meteorological influence on the occurrence of gastric dilatation-volvulus in military working dogs in Texas. Int J Biometeorol (2007) 0.81
Microinjection of morpholino oligos and RNAs in sea squirt (Ciona) embryos. Cold Spring Harb Protoc (2009) 0.81
HOT DNAs: a novel class of developmental enhancers. Genes Dev (2012) 0.80
Computational identification of regulatory DNAs underlying animal development. Nat Methods (2005) 0.80
Diphenhydramine-induced Brugada pattern. Resuscitation (2010) 0.80
Isolation of individual cells and tissues from electroporated sea squirt (Ciona) embryos by fluorescence-activated cell sorting (FACS). Cold Spring Harb Protoc (2009) 0.80
Toxicology in the ICU: Part 2: specific toxins. Chest (2011) 0.80
Recurrent seizures and serotonin syndrome following "2C-I" ingestion. J Med Toxicol (2013) 0.80
Coordinate regulation of an extended chromosome domain. Cell (2003) 0.79
The prognostic significance of frequency and morphology of premature ventricular complexes during ambulatory holter monitoring. Ann Noninvasive Electrocardiol (2012) 0.78
Activation, proliferation and commitment of endogenous stem/progenitor cells to the oligodendrocyte lineage by TS1 in a rat model of dysmyelination. Dev Neurosci (2006) 0.78
Concordance of field and emergency department assessment in the prehospital management of patients with dyspnea. Prehosp Emerg Care (2003) 0.78
Methodology for AACT evidence-based recommendations on the use of intravenous lipid emulsion therapy in poisoning. Clin Toxicol (Phila) (2015) 0.77
Case files of the Medical Toxicology Fellowship at Banner Good Samaritan Medical Center in Phoenix, AZ: a non-warfarin anticoagulant overdose. J Med Toxicol (2009) 0.77
Preference for monthly darbepoetin alfa dosing in patients with chronic kidney disease not receiving dialysis. Curr Med Res Opin (2006) 0.76
Prevalence of Rhabdomyolysis in Sympathomimetic Toxicity: a Comparison of Stimulants. J Med Toxicol (2015) 0.76